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The map label for this gene is yhfE [H]

Identifier: 118476538

GI number: 118476538

Start: 927559

End: 928608

Strand: Direct

Name: yhfE [H]

Synonym: BALH_0809

Alternate gene names: 118476538

Gene position: 927559-928608 (Clockwise)

Preceding gene: 118476537

Following gene: 118476539

Centisome position: 17.64

GC content: 37.9

Gene sequence:

>1050_bases
ATGGCACATCATGCGAAGGAAACGATGGAACTGATTAAGGAGCTTGTCTCTATTCCGAGTCCGTCTGGAAATACAGAGAA
AATTATTTGTTTTATTGAAAACTATGTAAGTGAGTGGAATGTAGAAACGAAGCGTAACAATAAAGGCGCTCTTATTTTAA
CGGTAAAAGGGAAAAATGATGCACAGCACCGCTTATTAACAGCGCACGTTGATACGTTAGGTGCGATGGTAAAAGAAATT
AAGCCTGACGGTCGTCTGAGTCTTTCTATGATTGGCGGATTTCGCTGGAACTCTGTAGAAGGGGAATATTGTGAAATTGA
AACATCAAGTGGTAAGACGTATACAGGAACGATTTTAATGCATCAAACGTCTGTACATGTATATAAAGATGCAGGTGAAG
CGAAACGCGATGAGAAAAATATTGAGGTTCGCATTGATGAGCGCGTATTTTCAGCTGATGAAGTACGTGAATTAGGAATT
GAAGTAGGAGACTTCGTTTCATTTGATCCACGCGTTCAAATTACAGAGAGTGGATACATAAAATCACGTCATTTAGATGA
CAAAGTAAGTGTTGCGATTCTATTAAAATTAATTAAGAGATTACAAGATGAAAATGTAACATTACCATATACAACTCATT
TCTTAATCTCTAACAATGAAGAGATTGGGTACGGCGGAAACTCTAATATTCCAGAAGAAACGGTTGAATATTTAGCAGTA
GATATGGGAGCGTTAGGTGATGGACAAGCATCTGACGAGTATACAGTATCTATTTGTGCAAAAGACTCTAGCGGTCCGTA
TCATTATGCACTGCGTAAACATTTAGTAGAGCTTGCGAAAACGAACAATATTGAATATAAAGTAGATATTTATCCGTACT
ATGGATCGGATGCATCAGCTGCAATTCGCGCTGGATTTGATGTGAAACACGCATTAATTGGAGCAGGTATTGATTCTTCT
CATGCATTTGAGCGTACGCATGAAAGTTCGATTGCTCATACAGAAGCACTTGTTTATGCATATGTATTATCAGAGATGAT
TGCAGAATAA

Upstream 100 bases:

>100_bases
AGTGAATTTTACTATAATTTAGAAAATTGAGCTATATGAGTAGAGGTTTTCTAGCAAATTTTGTATACTAAATAATAGAG
AAAATGAGGAGGAAACGACA

Downstream 100 bases:

>100_bases
GAAAAGAAATAGGCTACTTCTAGTAGCCTATTTTTTGTTTCCAGAGAAATCGACTTTATTTAACAAAAAGTAAATTTATT
GTAATTTATTTTACAATATT

Product: M42 family deblocking aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MAHHAKETMELIKELVSIPSPSGNTEKIICFIENYVSEWNVETKRNNKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEI
KPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGI
EVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAV
DMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASAAIRAGFDVKHALIGAGIDSS
HAFERTHESSIAHTEALVYAYVLSEMIAE

Sequences:

>Translated_349_residues
MAHHAKETMELIKELVSIPSPSGNTEKIICFIENYVSEWNVETKRNNKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEI
KPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGI
EVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAV
DMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASAAIRAGFDVKHALIGAGIDSS
HAFERTHESSIAHTEALVYAYVLSEMIAE
>Mature_348_residues
AHHAKETMELIKELVSIPSPSGNTEKIICFIENYVSEWNVETKRNNKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIK
PDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIE
VGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAVD
MGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASAAIRAGFDVKHALIGAGIDSSH
AFERTHESSIAHTEALVYAYVLSEMIAE

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 38811; Mature: 38680

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHHAKETMELIKELVSIPSPSGNTEKIICFIENYVSEWNVETKRNNKGALILTVKGKND
CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHCCCEECCCCCCEEEEEEECCCC
AQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILM
CHHHEEHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCEEEEECCCCCEEEEEEEE
HQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYI
EECEEEEEECCCCCCCCCCCEEEEECCHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCCE
KSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAV
EECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCEECCCCCCCCHHHHHHHHHH
DMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASA
HCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCH
AIRAGFDVKHALIGAGIDSSHAFERTHESSIAHTEALVYAYVLSEMIAE
HEECCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AHHAKETMELIKELVSIPSPSGNTEKIICFIENYVSEWNVETKRNNKGALILTVKGKND
CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHCCCEECCCCCCEEEEEEECCCC
AQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILM
CHHHEEHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCEEEEECCCCCEEEEEEEE
HQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYI
EECEEEEEECCCCCCCCCCCEEEEECCHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCCE
KSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEETVEYLAV
EECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCEECCCCCCCCHHHHHHHHHH
DMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNNIEYKVDIYPYYGSDASA
HCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCH
AIRAGFDVKHALIGAGIDSSHAFERTHESSIAHTEALVYAYVLSEMIAE
HEECCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]