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The map label for this gene is ykoX [H]

Identifier: 118476473

GI number: 118476473

Start: 847453

End: 848058

Strand: Direct

Name: ykoX [H]

Synonym: BALH_0738

Alternate gene names: 118476473

Gene position: 847453-848058 (Clockwise)

Preceding gene: 118476471

Following gene: 118476474

Centisome position: 16.12

GC content: 36.63

Gene sequence:

>606_bases
ATGGAGCAAATTATTTTAGATATAATTGAGTTTTTAAAGCAGTTTTCTTATTTTGGAGTTGTTTTAGCGTTAACGTTTGA
ATTTATTCCGGCAGAAGTCGTTTTGCCTATGGTTGGATATTGGGTGTACGAGGGGGATATGAATTTTTGGCTAGCTGTAT
TAGCTGGAACACTTGGCGGAACGACAGGACCGTTAACGTTATACGCACTCGGTTATTACGGTGGTCGTCCTCTATTAATA
AAGTACGGGAAATACTTCTTTATTAAAGAAGAACAAATTCAAAAAGCAGATGATTTCTTTGAGAAATATGGACCAGTTGT
AGCATTTGTTGGACGCTTTGTACCTGGCGTTCGAACGCTTATTTCTGTTCCATGTGGTATGGCGAAAATGAACATATGGA
AATTTAGTATATATACATTTGTAGCAATGTTCCCGTTAACAACTTTATATGTCTATTTTGGAATGAAATTAGGTCCACAT
TGGGAAAAGGCTGCGGATGTTGTGGGGCAATATATGCTACCGATATTACTAGTCGTCGTTATCGTTGTCGGCGGTATTTT
AATCTATAAATTTATGAAAAAAAGAAACAGAACGGAATCTATCTAG

Upstream 100 bases:

>100_bases
GATATTGGGATTGTGTTATTTATTTTGAACCGAATTGTAAAAATGGCGCCAGTTCAATTACAAGAAAAGCATAACGTAAA
CGTAGGATAGGAGTTAAAAT

Downstream 100 bases:

>100_bases
TCATTGGTGTTTGTATATTTTTTGAAAATAGATGAATAGTACAGGCAAAAGACTCTGAAGGACATACACATATAGGGAAT
ATAAAAGAGAGAGGGGAAAC

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MEQIILDIIEFLKQFSYFGVVLALTFEFIPAEVVLPMVGYWVYEGDMNFWLAVLAGTLGGTTGPLTLYALGYYGGRPLLI
KYGKYFFIKEEQIQKADDFFEKYGPVVAFVGRFVPGVRTLISVPCGMAKMNIWKFSIYTFVAMFPLTTLYVYFGMKLGPH
WEKAADVVGQYMLPILLVVVIVVGGILIYKFMKKRNRTESI

Sequences:

>Translated_201_residues
MEQIILDIIEFLKQFSYFGVVLALTFEFIPAEVVLPMVGYWVYEGDMNFWLAVLAGTLGGTTGPLTLYALGYYGGRPLLI
KYGKYFFIKEEQIQKADDFFEKYGPVVAFVGRFVPGVRTLISVPCGMAKMNIWKFSIYTFVAMFPLTTLYVYFGMKLGPH
WEKAADVVGQYMLPILLVVVIVVGGILIYKFMKKRNRTESI
>Mature_201_residues
MEQIILDIIEFLKQFSYFGVVLALTFEFIPAEVVLPMVGYWVYEGDMNFWLAVLAGTLGGTTGPLTLYALGYYGGRPLLI
KYGKYFFIKEEQIQKADDFFEKYGPVVAFVGRFVPGVRTLISVPCGMAKMNIWKFSIYTFVAMFPLTTLYVYFGMKLGPH
WEKAADVVGQYMLPILLVVVIVVGGILIYKFMKKRNRTESI

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22889; Mature: 22889

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIILDIIEFLKQFSYFGVVLALTFEFIPAEVVLPMVGYWVYEGDMNFWLAVLAGTLGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCC
TTGPLTLYALGYYGGRPLLIKYGKYFFIKEEQIQKADDFFEKYGPVVAFVGRFVPGVRTL
CCCCHHHHEEHHCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ISVPCGMAKMNIWKFSIYTFVAMFPLTTLYVYFGMKLGPHWEKAADVVGQYMLPILLVVV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IVVGGILIYKFMKKRNRTESI
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEQIILDIIEFLKQFSYFGVVLALTFEFIPAEVVLPMVGYWVYEGDMNFWLAVLAGTLGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCC
TTGPLTLYALGYYGGRPLLIKYGKYFFIKEEQIQKADDFFEKYGPVVAFVGRFVPGVRTL
CCCCHHHHEEHHCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ISVPCGMAKMNIWKFSIYTFVAMFPLTTLYVYFGMKLGPHWEKAADVVGQYMLPILLVVV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IVVGGILIYKFMKKRNRTESI
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]