Click here to switch to the map view.

The map label for this gene is oppC [C]

Identifier: 118476464

GI number: 118476464

Start: 839016

End: 840020

Strand: Direct

Name: oppC [C]

Synonym: BALH_0729

Alternate gene names: 118476464

Gene position: 839016-840020 (Clockwise)

Preceding gene: 118476463

Following gene: 118476465

Centisome position: 15.96

GC content: 37.01

Gene sequence:

>1005_bases
ATGTGGACGTATATAAAACGTGATAAAAGATTTTGGATAAGCATTGGGTTTCTTCTCCTATTAGTTCTTTTGAGCATCGG
AAATACGTTATGGAATGATGGACATATTAGACAAGTTACATTGCAATATGATGCGGATGAAAATCCACAAGTGCCACCGT
TTCCACCTTCATTACAATTTTTACTCGGGACAGACCGGAAAGGGTATGACCTGTTACATTTAGTCATTGAGGGCGCGAAG
TGGACGATTGGTATATCTATTTTAATTGCGGCACTTAGAATGGTAATAGGTGTGTTTTTCGGTGTCGTACTCGGAACGTA
TATAAAAAGAGGATTTTCAAAAATTGAGGCTTTCTTTGATAGTTTTACAGTTATTCCGACAGTTATGATTGCGTATTTTT
TTCTTCAATTTGCAAGTACATTTGGAAGTGGGGAGGAAACAACAACTTTTTTTGAAAGGGCTTCGTTTCAAGTTGTCTTA
CTTGTAATGCTTGTAATGCCAGTTATTGCACTGTATGTTGCGAAGGAAGTTCGTAAATTGCGAACGGAGGAATTTGTTGA
TGCCGCACGCATATTAGGTGGATCGAGAAGACATATTGTTATAAAGCATCTTTTCCCGCATCTTTATATGACGTTTATAC
TTGTATTTTTTCAGCAGTTTACGCAGACTCTTACTATTTTACTGCACTTAGGGTTACTAGAAATATTCTTTGGCGGAACG
GTTAAGTTTTTAGGACCGATAGAAGAAATAGAATCTTACACACATGAATGGTCAGGGCTAATTGGAGTCTATTTTAGATC
ATTAACAGTGAATCCGTGGATCCCTCTCGTTCCCATTACATTTTTTGGACTTACTATTTTTTCAGGAAATATGATTGTAA
AAAGTATCGAAGAGGCGATGATGAAAGTAAGGTTGGGAGGAGAGATAAAGAAGGATGTTGTAGAAGAGGAACAATCTGTT
GTGCAGTCGAAAGAAGAGTTATTTACTTTTAAGCATACGATGTGA

Upstream 100 bases:

>100_bases
GTTTTCATCGTTAGTGTGCTTCTTATATATATTCCGATTTTTATTTTATTTAAATTGTTTCATTATCTCATTCCGGCTGC
GATGAAGGAGAGGTTATAAT

Downstream 100 bases:

>100_bases
AGAGCCTAGGAAACTAGGTTCTTTTATTTTGTTATATTACAATATCGTAAGAGAGATGTAATGAAAATCGATAGGGGAGA
AATACGATTTCGTATACACT

Product: oligopeptide transport system, permease

Products: NA

Alternate protein names: Oligopeptide Transport System Permease Protein OppC; Oligopeptide Transport System Permease Protein-Like Protein; Oligopeptide Transport System Permease; Oligopeptide ABC Transporter Permease

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MWTYIKRDKRFWISIGFLLLLVLLSIGNTLWNDGHIRQVTLQYDADENPQVPPFPPSLQFLLGTDRKGYDLLHLVIEGAK
WTIGISILIAALRMVIGVFFGVVLGTYIKRGFSKIEAFFDSFTVIPTVMIAYFFLQFASTFGSGEETTTFFERASFQVVL
LVMLVMPVIALYVAKEVRKLRTEEFVDAARILGGSRRHIVIKHLFPHLYMTFILVFFQQFTQTLTILLHLGLLEIFFGGT
VKFLGPIEEIESYTHEWSGLIGVYFRSLTVNPWIPLVPITFFGLTIFSGNMIVKSIEEAMMKVRLGGEIKKDVVEEEQSV
VQSKEELFTFKHTM

Sequences:

>Translated_334_residues
MWTYIKRDKRFWISIGFLLLLVLLSIGNTLWNDGHIRQVTLQYDADENPQVPPFPPSLQFLLGTDRKGYDLLHLVIEGAK
WTIGISILIAALRMVIGVFFGVVLGTYIKRGFSKIEAFFDSFTVIPTVMIAYFFLQFASTFGSGEETTTFFERASFQVVL
LVMLVMPVIALYVAKEVRKLRTEEFVDAARILGGSRRHIVIKHLFPHLYMTFILVFFQQFTQTLTILLHLGLLEIFFGGT
VKFLGPIEEIESYTHEWSGLIGVYFRSLTVNPWIPLVPITFFGLTIFSGNMIVKSIEEAMMKVRLGGEIKKDVVEEEQSV
VQSKEELFTFKHTM
>Mature_334_residues
MWTYIKRDKRFWISIGFLLLLVLLSIGNTLWNDGHIRQVTLQYDADENPQVPPFPPSLQFLLGTDRKGYDLLHLVIEGAK
WTIGISILIAALRMVIGVFFGVVLGTYIKRGFSKIEAFFDSFTVIPTVMIAYFFLQFASTFGSGEETTTFFERASFQVVL
LVMLVMPVIALYVAKEVRKLRTEEFVDAARILGGSRRHIVIKHLFPHLYMTFILVFFQQFTQTLTILLHLGLLEIFFGGT
VKFLGPIEEIESYTHEWSGLIGVYFRSLTVNPWIPLVPITFFGLTIFSGNMIVKSIEEAMMKVRLGGEIKKDVVEEEQSV
VQSKEELFTFKHTM

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Yliabcd; Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787054, Length=299, Percent_Identity=20.7357859531773, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38248; Mature: 38248

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWTYIKRDKRFWISIGFLLLLVLLSIGNTLWNDGHIRQVTLQYDADENPQVPPFPPSLQF
CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHH
LLGTDRKGYDLLHLVIEGAKWTIGISILIAALRMVIGVFFGVVLGTYIKRGFSKIEAFFD
EECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFTVIPTVMIAYFFLQFASTFGSGEETTTFFERASFQVVLLVMLVMPVIALYVAKEVRKL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTEEFVDAARILGGSRRHIVIKHLFPHLYMTFILVFFQQFTQTLTILLHLGLLEIFFGGT
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VKFLGPIEEIESYTHEWSGLIGVYFRSLTVNPWIPLVPITFFGLTIFSGNMIVKSIEEAM
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
MKVRLGGEIKKDVVEEEQSVVQSKEELFTFKHTM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWTYIKRDKRFWISIGFLLLLVLLSIGNTLWNDGHIRQVTLQYDADENPQVPPFPPSLQF
CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHH
LLGTDRKGYDLLHLVIEGAKWTIGISILIAALRMVIGVFFGVVLGTYIKRGFSKIEAFFD
EECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFTVIPTVMIAYFFLQFASTFGSGEETTTFFERASFQVVLLVMLVMPVIALYVAKEVRKL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTEEFVDAARILGGSRRHIVIKHLFPHLYMTFILVFFQQFTQTLTILLHLGLLEIFFGGT
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VKFLGPIEEIESYTHEWSGLIGVYFRSLTVNPWIPLVPITFFGLTIFSGNMIVKSIEEAM
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
MKVRLGGEIKKDVVEEEQSVVQSKEELFTFKHTM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA