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The map label for this gene is gerKA [H]

Identifier: 118476317

GI number: 118476317

Start: 664445

End: 665956

Strand: Reverse

Name: gerKA [H]

Synonym: BALH_0572

Alternate gene names: 118476317

Gene position: 665956-664445 (Counterclockwise)

Preceding gene: 118476334

Following gene: 118476316

Centisome position: 12.67

GC content: 36.64

Gene sequence:

>1512_bases
GTGGAAATTATGACAGAGCAAAAAGAACCGCAAGAGAGTAAAAACCAAAAGCATATGTTTCCATCACTTCCGGAAAATAT
GAATTACATTGAAAATAAGCTCTGCCACTCAGATGATATAAAAAAATTAGATGTCCCTTTTCAAAACGGAAAAGGAACTA
TCATATATATTGAATCTTTAGCAGATCCAAATTTAATTCATCAATTAGCTCTTGAACCATTATTAACTCGGTCAGATTTG
TCTTTAGATAAAGCTTTTTCTACGTTAAATATGAAAAAAGAAACGAATTTAACTTATGGAGTACAGGTTTTATTACAAGG
TAAATCCTTATATTTTCATGAACATGTCGATAGTTTTTGTATTTTCGAAACAGCTTTATCTTTAAAGAGAGATATAGCAG
AGCCTGATAATGAAGGAATTGTGCGCGGTCCACATACTGGTTTTGTAGAGGATCTAGCAACTAATTTAAGCTCTATTCGT
AAACTCATTAAGAGTCCAAATTTAGTTGTTAAGTATTTTACAATCGGTGAAGAAATGCACACGAAAGTGGCAATTGCTTA
TATGCAAAATATAGCGAATGACGATTTAGTTACAGAAGTGAAAAGAAGATTAGAAACAATTAAAACGGATGCACTTATGT
CACCAGGATACATACAAGAATTTATAGAGGATACGTCTTTCTCACCATTTCCGCAGCAATTAAATACAGAGCGCCCAGAT
AGAACTGTTGCTAATTTAATGGAAGGACGTGTTGCCATTTTATCTGACGGAGATCCAACAACGCTCATCGTACCTGTTAC
GTTATTCGCTTTTTATCAATCACCGGATGATTATAATAACCGTTGGATTGTCGGTTCTTTCGTCCGAATGATTCGCTTAG
TAAGTTTTTTAATTGCCTTTCTCTTGCCAGCTTTATATATTGCAACTGTCGCTTTTCATCCCGATGTGTTGCCGCTCGAA
CTTGTGTATACGATTAAAGCTTCGTTAGAGAAAGTACCGCTTCCTCCTATTTTTGAAGCTCTCTTAATGGAGTTAATTTT
CGAGTTATTACGAGAAGCTGGTATTCGCTTGCCGAGCCGTGTTGGACAAACAATCGGTATTGTAGGTGGTTTAGTAATTG
GGGATGCGATTGTAAAAGCTGGGCTCGTTTCTTATACGATGATCATCGTAGTAGCTTTAACTGCAATCTCATCTTTTCTC
GTTCCATCAAACGATATGAGTTCAGCAGTTCGGATTCTTCGTTTTCCATTAATGCTCCTTGCTGCCATATTCGGATATGT
AGGAATATCATTCGGTCTCATTATAACTTTCGTTCACTTATGTCAGCTTCATTCATTTCATACACCATATCTTTCTCCTG
TTGCCCCGATGCGGATTAAAGATATGAAAGATTCATTTGTAAGACTACCAATTTGGTCATTTTGGGAACGACCACATGAT
CCAAAACCGAAAAAAATGCAACGCCAACATGTAACGAGAGAGGATGAGGACGGTGACAAACACGCAAAGTAA

Upstream 100 bases:

>100_bases
GATAGCGCAACAGAACTTTCAAGCTACTTCCCCAAATAATCCAAGCATAAATTTCTCACAAAAAGCAAAAATTAACAGAA
GTAACTTTATTCTAAAAGAG

Downstream 100 bases:

>100_bases
AATTTCACTTGTTCAATTTACCTTTTTCGTTATTCAATGCCAAATTGGAGTCGGTATACTATCTCTACCTAACCGGCTTC
ATCCGATAGCAAAAGGTGGT

Product: spore germination protein KA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MEIMTEQKEPQESKNQKHMFPSLPENMNYIENKLCHSDDIKKLDVPFQNGKGTIIYIESLADPNLIHQLALEPLLTRSDL
SLDKAFSTLNMKKETNLTYGVQVLLQGKSLYFHEHVDSFCIFETALSLKRDIAEPDNEGIVRGPHTGFVEDLATNLSSIR
KLIKSPNLVVKYFTIGEEMHTKVAIAYMQNIANDDLVTEVKRRLETIKTDALMSPGYIQEFIEDTSFSPFPQQLNTERPD
RTVANLMEGRVAILSDGDPTTLIVPVTLFAFYQSPDDYNNRWIVGSFVRMIRLVSFLIAFLLPALYIATVAFHPDVLPLE
LVYTIKASLEKVPLPPIFEALLMELIFELLREAGIRLPSRVGQTIGIVGGLVIGDAIVKAGLVSYTMIIVVALTAISSFL
VPSNDMSSAVRILRFPLMLLAAIFGYVGISFGLIITFVHLCQLHSFHTPYLSPVAPMRIKDMKDSFVRLPIWSFWERPHD
PKPKKMQRQHVTREDEDGDKHAK

Sequences:

>Translated_503_residues
MEIMTEQKEPQESKNQKHMFPSLPENMNYIENKLCHSDDIKKLDVPFQNGKGTIIYIESLADPNLIHQLALEPLLTRSDL
SLDKAFSTLNMKKETNLTYGVQVLLQGKSLYFHEHVDSFCIFETALSLKRDIAEPDNEGIVRGPHTGFVEDLATNLSSIR
KLIKSPNLVVKYFTIGEEMHTKVAIAYMQNIANDDLVTEVKRRLETIKTDALMSPGYIQEFIEDTSFSPFPQQLNTERPD
RTVANLMEGRVAILSDGDPTTLIVPVTLFAFYQSPDDYNNRWIVGSFVRMIRLVSFLIAFLLPALYIATVAFHPDVLPLE
LVYTIKASLEKVPLPPIFEALLMELIFELLREAGIRLPSRVGQTIGIVGGLVIGDAIVKAGLVSYTMIIVVALTAISSFL
VPSNDMSSAVRILRFPLMLLAAIFGYVGISFGLIITFVHLCQLHSFHTPYLSPVAPMRIKDMKDSFVRLPIWSFWERPHD
PKPKKMQRQHVTREDEDGDKHAK
>Mature_503_residues
MEIMTEQKEPQESKNQKHMFPSLPENMNYIENKLCHSDDIKKLDVPFQNGKGTIIYIESLADPNLIHQLALEPLLTRSDL
SLDKAFSTLNMKKETNLTYGVQVLLQGKSLYFHEHVDSFCIFETALSLKRDIAEPDNEGIVRGPHTGFVEDLATNLSSIR
KLIKSPNLVVKYFTIGEEMHTKVAIAYMQNIANDDLVTEVKRRLETIKTDALMSPGYIQEFIEDTSFSPFPQQLNTERPD
RTVANLMEGRVAILSDGDPTTLIVPVTLFAFYQSPDDYNNRWIVGSFVRMIRLVSFLIAFLLPALYIATVAFHPDVLPLE
LVYTIKASLEKVPLPPIFEALLMELIFELLREAGIRLPSRVGQTIGIVGGLVIGDAIVKAGLVSYTMIIVVALTAISSFL
VPSNDMSSAVRILRFPLMLLAAIFGYVGISFGLIITFVHLCQLHSFHTPYLSPVAPMRIKDMKDSFVRLPIWSFWERPHD
PKPKKMQRQHVTREDEDGDKHAK

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 56833; Mature: 56833

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIMTEQKEPQESKNQKHMFPSLPENMNYIENKLCHSDDIKKLDVPFQNGKGTIIYIESL
CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEECC
ADPNLIHQLALEPLLTRSDLSLDKAFSTLNMKKETNLTYGVQVLLQGKSLYFHEHVDSFC
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCHHHEEHEEEECCCEEEHHHHHHHH
IFETALSLKRDIAEPDNEGIVRGPHTGFVEDLATNLSSIRKLIKSPNLVVKYFTIGEEMH
HHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHH
TKVAIAYMQNIANDDLVTEVKRRLETIKTDALMSPGYIQEFIEDTSFSPFPQQLNTERPD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCCCCCH
RTVANLMEGRVAILSDGDPTTLIVPVTLFAFYQSPDDYNNRWIVGSFVRMIRLVSFLIAF
HHHHHHHCCCEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHH
LLPALYIATVAFHPDVLPLELVYTIKASLEKVPLPPIFEALLMELIFELLREAGIRLPSR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
VGQTIGIVGGLVIGDAIVKAGLVSYTMIIVVALTAISSFLVPSNDMSSAVRILRFPLMLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AAIFGYVGISFGLIITFVHLCQLHSFHTPYLSPVAPMRIKDMKDSFVRLPIWSFWERPHD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEECCHHHHHCCCCC
PKPKKMQRQHVTREDEDGDKHAK
CCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEIMTEQKEPQESKNQKHMFPSLPENMNYIENKLCHSDDIKKLDVPFQNGKGTIIYIESL
CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEECC
ADPNLIHQLALEPLLTRSDLSLDKAFSTLNMKKETNLTYGVQVLLQGKSLYFHEHVDSFC
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCHHHEEHEEEECCCEEEHHHHHHHH
IFETALSLKRDIAEPDNEGIVRGPHTGFVEDLATNLSSIRKLIKSPNLVVKYFTIGEEMH
HHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHH
TKVAIAYMQNIANDDLVTEVKRRLETIKTDALMSPGYIQEFIEDTSFSPFPQQLNTERPD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCCCCCH
RTVANLMEGRVAILSDGDPTTLIVPVTLFAFYQSPDDYNNRWIVGSFVRMIRLVSFLIAF
HHHHHHHCCCEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHH
LLPALYIATVAFHPDVLPLELVYTIKASLEKVPLPPIFEALLMELIFELLREAGIRLPSR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
VGQTIGIVGGLVIGDAIVKAGLVSYTMIIVVALTAISSFLVPSNDMSSAVRILRFPLMLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AAIFGYVGISFGLIITFVHLCQLHSFHTPYLSPVAPMRIKDMKDSFVRLPIWSFWERPHD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEECCHHHHHCCCCC
PKPKKMQRQHVTREDEDGDKHAK
CCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]