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The map label for this gene is fdhD [H]

Identifier: 118476275

GI number: 118476275

Start: 609346

End: 610188

Strand: Reverse

Name: fdhD [H]

Synonym: BALH_0528

Alternate gene names: 118476275

Gene position: 610188-609346 (Counterclockwise)

Preceding gene: 118476283

Following gene: 118476274

Centisome position: 11.61

GC content: 34.16

Gene sequence:

>843_bases
ATGTGGGAGAAAATACATATAAAAGGGGAATTTCATATGGGGCCTACGCAAGAGAGTTATACAATTGTACGCTATCACTC
TGGTACATTTTCAAAACAAACTGATGAGATTGTTACAGAATCTCCTATCACTATTAAATTAAATGGTGAAGAGTATGTAA
CAGTCGTATGTACACCAAATTACATCGAAGATATGGTAATTGGTTTTTTAATTTCTGAAGGAATTATTTCTTCCTATAAA
GATGTTGGAGAACTATGGGTTCAAAAAGATAACGGAATTGTCCATGTAACATCATCCAAAGTAAATCCGCTCTATCAAAA
TTTATATAATAAACGATACATCACTTCTTGCTGCGGAAAAGGTAGACAAGGTTTTATTTTCGCTAACGATGCCGCAAAAG
CAAAAGATTTACATAATATACATGTGACAATTACTCCTGAAGAATGCTTTCACTTAATGAATACTTTACAACAATCTTCC
ACTACATTTCGCCAAACTGGCGGTGTTCACAATACCGCGCTATGTGATCGAAATAATATCCTTATATCAAGAATGGATAT
CGGAAGACATAATGCATTAGATAAAATATACGGCCATTGTTTGCGTAACGATATATCTGTTAAAGGAAAAATCATTGCAT
TTAGCGGGCGTATTTCATCCGAAATTTTACTCAAAGTTTCAAAAATCGGATGTGAAATTGTTCTATCTAAGTCCGCTCCA
ACAAAACTAGCATTGCAACTCGCCCATGATTTAGGCATTACAGTCGTAGGATTTATTAGAAATGAATCCTGCAATATTTA
CACACATCCACATCGAATTGATGGTTATCAATCGAATAACTAA

Upstream 100 bases:

>100_bases
TTCTACATTTCTATTATATCGTATATATACAATAATAACCAAAATAATCTGATACCTTCCTTCTAATAGATGTTTTTATT
TTTTCAATGTTTTATGATGA

Downstream 100 bases:

>100_bases
AATAACTCCTCGGTTGAGGAGTTATTTTAGTTATAAAAGTGTAATATATTAAACACTTGAATAGTTAATAAAGTTAATAT
ATAATTTCATTACATATTAA

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MWEKIHIKGEFHMGPTQESYTIVRYHSGTFSKQTDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLISEGIISSYK
DVGELWVQKDNGIVHVTSSKVNPLYQNLYNKRYITSCCGKGRQGFIFANDAAKAKDLHNIHVTITPEECFHLMNTLQQSS
TTFRQTGGVHNTALCDRNNILISRMDIGRHNALDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAP
TKLALQLAHDLGITVVGFIRNESCNIYTHPHRIDGYQSNN

Sequences:

>Translated_280_residues
MWEKIHIKGEFHMGPTQESYTIVRYHSGTFSKQTDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLISEGIISSYK
DVGELWVQKDNGIVHVTSSKVNPLYQNLYNKRYITSCCGKGRQGFIFANDAAKAKDLHNIHVTITPEECFHLMNTLQQSS
TTFRQTGGVHNTALCDRNNILISRMDIGRHNALDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAP
TKLALQLAHDLGITVVGFIRNESCNIYTHPHRIDGYQSNN
>Mature_280_residues
MWEKIHIKGEFHMGPTQESYTIVRYHSGTFSKQTDEIVTESPITIKLNGEEYVTVVCTPNYIEDMVIGFLISEGIISSYK
DVGELWVQKDNGIVHVTSSKVNPLYQNLYNKRYITSCCGKGRQGFIFANDAAKAKDLHNIHVTITPEECFHLMNTLQQSS
TTFRQTGGVHNTALCDRNNILISRMDIGRHNALDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAP
TKLALQLAHDLGITVVGFIRNESCNIYTHPHRIDGYQSNN

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=244, Percent_Identity=28.6885245901639, Blast_Score=95, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31421; Mature: 31421

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWEKIHIKGEFHMGPTQESYTIVRYHSGTFSKQTDEIVTESPITIKLNGEEYVTVVCTPN
CCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHCCCCEEEEECCCEEEEEEECCC
YIEDMVIGFLISEGIISSYKDVGELWVQKDNGIVHVTSSKVNPLYQNLYNKRYITSCCGK
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHCCHHHHHHHCC
GRQGFIFANDAAKAKDLHNIHVTITPEECFHLMNTLQQSSTTFRQTGGVHNTALCDRNNI
CCCEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCE
LISRMDIGRHNALDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAP
EEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHEEEEECCCEEEEEECCCC
TKLALQLAHDLGITVVGFIRNESCNIYTHPHRIDGYQSNN
HHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MWEKIHIKGEFHMGPTQESYTIVRYHSGTFSKQTDEIVTESPITIKLNGEEYVTVVCTPN
CCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHCCCCEEEEECCCEEEEEEECCC
YIEDMVIGFLISEGIISSYKDVGELWVQKDNGIVHVTSSKVNPLYQNLYNKRYITSCCGK
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHCCHHHHHHHCC
GRQGFIFANDAAKAKDLHNIHVTITPEECFHLMNTLQQSSTTFRQTGGVHNTALCDRNNI
CCCEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCE
LISRMDIGRHNALDKIYGHCLRNDISVKGKIIAFSGRISSEILLKVSKIGCEIVLSKSAP
EEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHEEEEECCCEEEEEECCCC
TKLALQLAHDLGITVVGFIRNESCNIYTHPHRIDGYQSNN
HHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA