Click here to switch to the map view.

The map label for this gene is llrF [H]

Identifier: 118476273

GI number: 118476273

Start: 607126

End: 607809

Strand: Reverse

Name: llrF [H]

Synonym: BALH_0526

Alternate gene names: 118476273

Gene position: 607809-607126 (Counterclockwise)

Preceding gene: 118476274

Following gene: 118476272

Centisome position: 11.56

GC content: 33.77

Gene sequence:

>684_bases
GTGCACAAGATTATGGTAAAAATTTTATTAGTAGACGATGAAGAACGTATGTTACGATTATTAGATCTGTTCTTAAGCCC
TCGCGGCTATTTTTGTATGAAAGCTACCTCTGGCCTTGAAGCACTAAAATTAATAGAACAAAAAGACTTCGATATTATTT
TGTTAGATGTTATGATGCCGAATATGGATGGATGGGATACTTGCTATCAAATTCGTCAAATCTCCAACGTTCCAATTATA
ATGCTAACAGCTCGTAATCAAAATTACGATATGGTGAAAGGTCTTACTATGGGCGCAGATGACTATATTACAAAACCATT
TGATGAACATGTATTAGTCGCAAGAATCGAGGCTATATTACGTCGTACAAAGAAAGATGGATTTGTCAGCTTCAATGGTA
TTGAGTGGGATAAAACGAAACATACTGTTACAGTTTATGATGAGAAAATCTCACTAACACCTATCGAGTTTTCGTTACTT
GGACTATTTTTACAAAATACAAACCGTGCTTATAGCCGAGATGATTTAATCGAGAAAATTTGGGGCTATGAAACAGATAT
TGAATATAGAACAATCGATTCACATATTCGTAATATCCGCGATAAATTACGGAAAAAAGGATTTCCAGTTGAAAATTACT
TAGAAACTGTTTATAAGGTCGGATATAAATGGAAAAGTGAATAA

Upstream 100 bases:

>100_bases
TCAATTACTCTGAGCGAAAAATAACTCCTCCACTCAATCACATAAAAAGAGTTTTTTATTATTTTCATGTAAACTATACA
AGTAGAATGAACAGTTTGGG

Downstream 100 bases:

>100_bases
TCACTTCGGTCAGTGGAAACTAGTATACCACTGACCCTTTATTATGAATAAGGTATGGTGAGAAAATGAGTAAACTTTCA
CTTAAAATCGGGACATACTT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MHKIMVKILLVDDEERMLRLLDLFLSPRGYFCMKATSGLEALKLIEQKDFDIILLDVMMPNMDGWDTCYQIRQISNVPII
MLTARNQNYDMVKGLTMGADDYITKPFDEHVLVARIEAILRRTKKDGFVSFNGIEWDKTKHTVTVYDEKISLTPIEFSLL
GLFLQNTNRAYSRDDLIEKIWGYETDIEYRTIDSHIRNIRDKLRKKGFPVENYLETVYKVGYKWKSE

Sequences:

>Translated_227_residues
MHKIMVKILLVDDEERMLRLLDLFLSPRGYFCMKATSGLEALKLIEQKDFDIILLDVMMPNMDGWDTCYQIRQISNVPII
MLTARNQNYDMVKGLTMGADDYITKPFDEHVLVARIEAILRRTKKDGFVSFNGIEWDKTKHTVTVYDEKISLTPIEFSLL
GLFLQNTNRAYSRDDLIEKIWGYETDIEYRTIDSHIRNIRDKLRKKGFPVENYLETVYKVGYKWKSE
>Mature_227_residues
MHKIMVKILLVDDEERMLRLLDLFLSPRGYFCMKATSGLEALKLIEQKDFDIILLDVMMPNMDGWDTCYQIRQISNVPII
MLTARNQNYDMVKGLTMGADDYITKPFDEHVLVARIEAILRRTKKDGFVSFNGIEWDKTKHTVTVYDEKISLTPIEFSLL
GLFLQNTNRAYSRDDLIEKIWGYETDIEYRTIDSHIRNIRDKLRKKGFPVENYLETVYKVGYKWKSE

Specific function: Member of the two-component regulatory system ArlS/ArlR involved in the regulation of adhesion, autolysis, multidrug resistance and virulence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=34.9557522123894, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=34.6666666666667, Blast_Score=141, Evalue=3e-35,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=34.5454545454545, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1789809, Length=226, Percent_Identity=32.3008849557522, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=36.5217391304348, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1790860, Length=202, Percent_Identity=32.1782178217822, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=30.3571428571429, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=32.1266968325792, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=30, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=31.5789473684211, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=31.8181818181818, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1787229, Length=206, Percent_Identity=31.0679611650485, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=28.1818181818182, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=27.0386266094421, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790437, Length=157, Percent_Identity=29.9363057324841, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788550, Length=103, Percent_Identity=35.9223300970874, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI145693157, Length=120, Percent_Identity=35, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790299, Length=111, Percent_Identity=34.2342342342342, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1789149, Length=131, Percent_Identity=31.2977099236641, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1788905, Length=117, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI1788713, Length=108, Percent_Identity=37.037037037037, Blast_Score=61, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=112, Percent_Identity=33.0357142857143, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26765; Mature: 26765

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKIMVKILLVDDEERMLRLLDLFLSPRGYFCMKATSGLEALKLIEQKDFDIILLDVMMP
CCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEECC
NMDGWDTCYQIRQISNVPIIMLTARNQNYDMVKGLTMGADDYITKPFDEHVLVARIEAIL
CCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHCEECCCCCCCCCCCCHHHHHHHHHHHH
RRTKKDGFVSFNGIEWDKTKHTVTVYDEKISLTPIEFSLLGLFLQNTNRAYSRDDLIEKI
HHHCCCCCEEECCEEECCCCCEEEEEECEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHH
WGYETDIEYRTIDSHIRNIRDKLRKKGFPVENYLETVYKVGYKWKSE
CCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEECCC
>Mature Secondary Structure
MHKIMVKILLVDDEERMLRLLDLFLSPRGYFCMKATSGLEALKLIEQKDFDIILLDVMMP
CCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEECC
NMDGWDTCYQIRQISNVPIIMLTARNQNYDMVKGLTMGADDYITKPFDEHVLVARIEAIL
CCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHCEECCCCCCCCCCCCHHHHHHHHHHHH
RRTKKDGFVSFNGIEWDKTKHTVTVYDEKISLTPIEFSLLGLFLQNTNRAYSRDDLIEKI
HHHCCCCCEEECCEEECCCCCEEEEEECEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHH
WGYETDIEYRTIDSHIRNIRDKLRKKGFPVENYLETVYKVGYKWKSE
CCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA