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The map label for this gene is ydeD [H]

Identifier: 118476269

GI number: 118476269

Start: 602312

End: 603283

Strand: Reverse

Name: ydeD [H]

Synonym: BALH_0522

Alternate gene names: 118476269

Gene position: 603283-602312 (Counterclockwise)

Preceding gene: 118476271

Following gene: 118476268

Centisome position: 11.48

GC content: 35.91

Gene sequence:

>972_bases
ATGTCACACACAAAAAATCAAATACTCGAGAGGAGATGCATGATCATGAACAACAGTAGACGAATTGGACTCATTATGAT
TATTACAGGAGCTACCTTATGGGGATTATCTGGCCCTATGATTCAGTGGCTATTTCAACATACTAACGTATCATCAGTTG
ATTTTTTAACAATTCGCTTGTTGCTTGCAGGAATATTTATTTTATCTTTCTTACTGATAAAGAAACAAAACATATTTCAA
ATTTGGAAACACCCTAGATATTCTATACAACTTATTATTTTCTCTATTCTCGGCATGCTCGGTGCGCAATATGCCTTTAT
CGAAACAGTTCATATTAGTAATGCGGTCACAGCGACACTATTTCAATTTCTAGGTCCTGTTCTTATTACCATGTATGTCG
CATTTGAACAACGAAAATTCCCTGCTCCCATGCAACTACTCGCAATTATAACTGCACTAACGGGTACGTACTTTATTATT
ACAAACGGTTCCATTGAAAATATTGTTTTATCGAAAGAAGCGATTATTTTTGGCCTATTAACAGCAATTGGATTTGCATT
TTATACCCTTCATCCAGCTTCTCTTATTAAAGAATGTGGAACAATTGTAGTAATTGGATGGGGGATGTTAATCGGAGGCA
TTGCCCTGCTTATTTGTAATCGCTCGTTTGAATGGACTCAGCTTTCGCAAACTTTTACACTAAAAACTTTTTCAATGCTT
ATTCTAATCATCATAAGTGGCACTCTTTCTTTCCTTCTTTATATCGGTAGTTTGAAATATTTAGCCGCAACTGAAACAAG
CATTTTATCTAGCATCGAACCGCTTGTAGCTGCCATCGTTTCAATCGCTTGGCTGAATGAATCCTTTGGAGCATATCAAC
TATTAGGCGGCGTATGTATCGTTCTTTCTGTTATTTTCTTAACGATGCCGCAAAAAGAAAATGAACCTACCTTTTCAACT
GAACAAATATAA

Upstream 100 bases:

>100_bases
TTAAATTAGGCGTTAATTCTAACATAATATCTGACCCCTTAATAAAACTAAAATCTGATACTTTTTACAGTACCAGAAGT
TATATATAATTCCTTTTATC

Downstream 100 bases:

>100_bases
AAAATGTCAAAAGAGGTCGTACGAAACTTACGACCTCTTTTGACGTTTTAAAGGAATTGTCCCGCTTTCTAGCAAATACA
ATTACACTAACAGTAAAAAC

Product: DMT family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSHTKNQILERRCMIMNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGIFILSFLLIKKQNIFQ
IWKHPRYSIQLIIFSILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQRKFPAPMQLLAIITALTGTYFII
TNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSML
ILIIISGTLSFLLYIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQKENEPTFST
EQI

Sequences:

>Translated_323_residues
MSHTKNQILERRCMIMNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGIFILSFLLIKKQNIFQ
IWKHPRYSIQLIIFSILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQRKFPAPMQLLAIITALTGTYFII
TNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSML
ILIIISGTLSFLLYIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQKENEPTFST
EQI
>Mature_322_residues
SHTKNQILERRCMIMNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGIFILSFLLIKKQNIFQI
WKHPRYSIQLIIFSILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQRKFPAPMQLLAIITALTGTYFIIT
NGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSMLI
LIIISGTLSFLLYIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQKENEPTFSTE
QI

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790092, Length=308, Percent_Identity=33.4415584415584, Blast_Score=157, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35949; Mature: 35817

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTKNQILERRCMIMNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRL
CCCHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
LLAGIFILSFLLIKKQNIFQIWKHPRYSIQLIIFSILGMLGAQYAFIETVHISNAVTATL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHEEEEHHHHHHHHH
FQFLGPVLITMYVAFEQRKFPAPMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHH
TAIGFAFYTLHPASLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSML
HHHHHHHHHCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ILIIISGTLSFLLYIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VLSVIFLTMPQKENEPTFSTEQI
HHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SHTKNQILERRCMIMNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRL
CCHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
LLAGIFILSFLLIKKQNIFQIWKHPRYSIQLIIFSILGMLGAQYAFIETVHISNAVTATL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHEEEEHHHHHHHHH
FQFLGPVLITMYVAFEQRKFPAPMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHH
TAIGFAFYTLHPASLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSML
HHHHHHHHHCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ILIIISGTLSFLLYIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VLSVIFLTMPQKENEPTFSTEQI
HHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]