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The map label for this gene is int [H]

Identifier: 118476018

GI number: 118476018

Start: 277538

End: 278746

Strand: Reverse

Name: int [H]

Synonym: BALH_0256

Alternate gene names: 118476018

Gene position: 278746-277538 (Counterclockwise)

Preceding gene: 118476019

Following gene: 118476011

Centisome position: 5.3

GC content: 32.26

Gene sequence:

>1209_bases
ATGGAGAAATTAAACATGCCAAAGATTTCTAATATCTATCGCGATAAGAAAAGTGGGAAATGGTATTTTGTGGCGAATCT
TGGCTATGATGAACATGGTCAAAGAGTACAACATTGGAAACGTGGTTTTCCTACACAAAAAGAAGCCAAGCAGGCCTATG
ATGAATTTATGAACAATTACTCAATGACTGCGGTGAAAATGAACAGCACAATGTCATATAAGGAATTTTATGACACATAC
TTCAAGCCAGATTATAAACGTTCTGTAAAACAGCGAACTTATGAAAATCGTGTTTTAACAATGGATATTCATTTTTCTTT
TTTCTTTAGTCGAAAGTTGAAAGATATAAATGCTCCTATGATGAAAAAATGGCAAAATAAGCTTTCAGAAAACTACTCAA
GTGCATACATTAGAAATATTTATGGACTATTTCAAAAAAGTTTAGATTTGGCGGTAACTCTTGGACTTCTACAGAAGAAC
ATTGCCAAACAGGTTGGAAATGTAAAGAAAGTAAAGAAAAAAGTTGATTTTTGGACTAAAGAGGAATTTGAGAAGGTTAT
TTCTACGTTTAATATATCTGATTATCATGAACACTTCTCATTCATCACTATATGGCTTTTATTTATGTCTGGTTTGCGTT
TTGGAGAGGCTCAAGCATTGGAGTGGAACACAGATATAGATTTTGAAGAAAAGACCCTGACGATCAATAAATCAATGTAT
TATAAGAATGCTAATGAGTTTTATATTACGGAACCAAAAACAAAGGCCAGCAACCGTATTATTGCATTAGATGATGATAC
AATAGATTTCTTGAAAGACTGGAAAAAAATTCAGTCCAAAAATTGTCCTTCGAAATATATTTTATCTTATAATGGTGCAC
CAACAAATCGAAGTGCTACATTTCATATAATCAAGCGACATTCTAAGCTTGCCAGTGTTCATAAAATAAGAACTCATGCT
CTTAGACACTCTCACGCTTCGCTATTGATTTCTCTTGGAGAAAACGCCTTAGTAGTTCGTGATAGACTAGGACATGAGGA
TATACAAACCACCTTAGGCACTTATGGGCACTTGTATCCAAATATGAATAGGGAAGTTGCAAATAAATTAACTAATTTGG
TTAATTTTAAAAAAGAACAAATACTTCATAGAAAACTAGTATCTAATCAATTTATAAAAAGAAAACGGGATAGTAAAAAT
ATTGATTAA

Upstream 100 bases:

>100_bases
TTGATGGTAAATAAGGGTTTTAGCTATTACTCATCACGAAGATTGGGCAGAGTCCCTGTTTCTTCCGTTGAAGAGATTTT
AGGTTTTACTATTAATTTAG

Downstream 100 bases:

>100_bases
AATATATTTCTATTTTATAATAATATTGAGAGTAAAGAACTTTCTGGGGTTTGCATAGTGCAAACGGGGGTCGCTATCTA
TAATGGATAGCGACTTTTTT

Product: phage integrase family site specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MEKLNMPKISNIYRDKKSGKWYFVANLGYDEHGQRVQHWKRGFPTQKEAKQAYDEFMNNYSMTAVKMNSTMSYKEFYDTY
FKPDYKRSVKQRTYENRVLTMDIHFSFFFSRKLKDINAPMMKKWQNKLSENYSSAYIRNIYGLFQKSLDLAVTLGLLQKN
IAKQVGNVKKVKKKVDFWTKEEFEKVISTFNISDYHEHFSFITIWLLFMSGLRFGEAQALEWNTDIDFEEKTLTINKSMY
YKNANEFYITEPKTKASNRIIALDDDTIDFLKDWKKIQSKNCPSKYILSYNGAPTNRSATFHIIKRHSKLASVHKIRTHA
LRHSHASLLISLGENALVVRDRLGHEDIQTTLGTYGHLYPNMNREVANKLTNLVNFKKEQILHRKLVSNQFIKRKRDSKN
ID

Sequences:

>Translated_402_residues
MEKLNMPKISNIYRDKKSGKWYFVANLGYDEHGQRVQHWKRGFPTQKEAKQAYDEFMNNYSMTAVKMNSTMSYKEFYDTY
FKPDYKRSVKQRTYENRVLTMDIHFSFFFSRKLKDINAPMMKKWQNKLSENYSSAYIRNIYGLFQKSLDLAVTLGLLQKN
IAKQVGNVKKVKKKVDFWTKEEFEKVISTFNISDYHEHFSFITIWLLFMSGLRFGEAQALEWNTDIDFEEKTLTINKSMY
YKNANEFYITEPKTKASNRIIALDDDTIDFLKDWKKIQSKNCPSKYILSYNGAPTNRSATFHIIKRHSKLASVHKIRTHA
LRHSHASLLISLGENALVVRDRLGHEDIQTTLGTYGHLYPNMNREVANKLTNLVNFKKEQILHRKLVSNQFIKRKRDSKN
ID
>Mature_402_residues
MEKLNMPKISNIYRDKKSGKWYFVANLGYDEHGQRVQHWKRGFPTQKEAKQAYDEFMNNYSMTAVKMNSTMSYKEFYDTY
FKPDYKRSVKQRTYENRVLTMDIHFSFFFSRKLKDINAPMMKKWQNKLSENYSSAYIRNIYGLFQKSLDLAVTLGLLQKN
IAKQVGNVKKVKKKVDFWTKEEFEKVISTFNISDYHEHFSFITIWLLFMSGLRFGEAQALEWNTDIDFEEKTLTINKSMY
YKNANEFYITEPKTKASNRIIALDDDTIDFLKDWKKIQSKNCPSKYILSYNGAPTNRSATFHIIKRHSKLASVHKIRTHA
LRHSHASLLISLGENALVVRDRLGHEDIQTTLGTYGHLYPNMNREVANKLTNLVNFKKEQILHRKLVSNQFIKRKRDSKN
ID

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 47562; Mature: 47562

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLNMPKISNIYRDKKSGKWYFVANLGYDEHGQRVQHWKRGFPTQKEAKQAYDEFMNNY
CCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCC
SMTAVKMNSTMSYKEFYDTYFKPDYKRSVKQRTYENRVLTMDIHFSFFFSRKLKDINAPM
CEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCCHH
MKKWQNKLSENYSSAYIRNIYGLFQKSLDLAVTLGLLQKNIAKQVGNVKKVKKKVDFWTK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EEFEKVISTFNISDYHEHFSFITIWLLFMSGLRFGEAQALEWNTDIDFEEKTLTINKSMY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEECCEE
YKNANEFYITEPKTKASNRIIALDDDTIDFLKDWKKIQSKNCPSKYILSYNGAPTNRSAT
EECCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHH
FHIIKRHSKLASVHKIRTHALRHSHASLLISLGENALVVRDRLGHEDIQTTLGTYGHLYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHCCHHHHHHHHHHHHCCCC
NMNREVANKLTNLVNFKKEQILHRKLVSNQFIKRKRDSKNID
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEKLNMPKISNIYRDKKSGKWYFVANLGYDEHGQRVQHWKRGFPTQKEAKQAYDEFMNNY
CCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCC
SMTAVKMNSTMSYKEFYDTYFKPDYKRSVKQRTYENRVLTMDIHFSFFFSRKLKDINAPM
CEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCCHH
MKKWQNKLSENYSSAYIRNIYGLFQKSLDLAVTLGLLQKNIAKQVGNVKKVKKKVDFWTK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EEFEKVISTFNISDYHEHFSFITIWLLFMSGLRFGEAQALEWNTDIDFEEKTLTINKSMY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEECCEE
YKNANEFYITEPKTKASNRIIALDDDTIDFLKDWKKIQSKNCPSKYILSYNGAPTNRSAT
EECCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHH
FHIIKRHSKLASVHKIRTHALRHSHASLLISLGENALVVRDRLGHEDIQTTLGTYGHLYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHCCHHHHHHHHHHHHCCCC
NMNREVANKLTNLVNFKKEQILHRKLVSNQFIKRKRDSKNID
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]