Click here to switch to the map view.

The map label for this gene is ywpJ [H]

Identifier: 118475987

GI number: 118475987

Start: 234960

End: 235919

Strand: Reverse

Name: ywpJ [H]

Synonym: BALH_0224

Alternate gene names: 118475987

Gene position: 235919-234960 (Counterclockwise)

Preceding gene: 118475997

Following gene: 118475979

Centisome position: 4.49

GC content: 33.65

Gene sequence:

>960_bases
ATGAGAGATAAAATACAATCTTTCCAAGATAAGTTTATATGTTTCCTCTATATAACTATGTATAATAAGAACAAAGAGGT
GGTCATTTTGAAATTAATCGCATTAGATATGGATGGTACACTACTATCATCTAATCTTGAAATCTCCAAAGAGAACTTAC
AAGCTATCCAAACTGCAAAAGAGGCTGGTCATATTGTCATGATTTGTTCTGGCCGTGCAAAAGAGGATGCTTTGAAATTA
TTGGAAGAGTATAAACTATCTCTTCCAGTTGGAGCGAGCAATGGGGCAATTGTTTATGTGGATGGAAAAGTAATTAACTC
GCGTTGTTTACAAAACGATAAAGTATACAAGCTTGCAAAATTACTAGAATCTGAGGGTTTTCCTTATAAACTATATACGA
ATAAAGGAGTTTATTCTCCGTATACATGGCAAGATCAAGTCATGCAAGCGTTCGAAGAAAACAAGCATGCACTAGATGTT
ACACTTGAGGAACTTGAAAGAATTACAGAAAAACAAAAGAAGTCAAACTTAATTACTGATTTCCAAAAGATTGAGGATGT
TGTAAATAATACAGAATTAGAAATATCTAAATTCTTTATTTTGACATTTAACGCAGGGCATCGCGCACAGCTATTAAGTA
TGTTACAAGAAGATACTGATATTATGGTTACAGCATCTGCTCCTACTAATTTAGAAATTATGGACAAGAATGGACATAAA
GGAAATGGACTGAAACAAATGGCAGCCCATTTTAATATACCAATTGAAGATACAGTTGCGATCGGTGACAATTTTAACGA
TGTACCCATGTTAGAAGCAGCTGGTTTATCAGTTGCAATGGGAAACGCTGAAGAAGATGTAAAAAAACTATGTGATGTTG
TAACATTAACAAACAATGAACATGGTGTTGCTCATGCAATCGAGCAATTTGTATTGAAACAAACTTCATCTAGTAAATAA

Upstream 100 bases:

>100_bases
ATATAACGAAACATCCCCATACCTCCCTCTACTTTTGTTACAAAGTAAGATAAATCTTTCATTAATAAAGTAGAATCTAT
CAAATTCTTACTGATAGTTC

Downstream 100 bases:

>100_bases
AAAAAGGACTCTTTCAATTTCTGAAAGAGTCCTTCTCTTTTATATATGATGACAAGCAACAAAGTGCTCTTCACCAACAT
TACGGAATTCCGGTACCGTT

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRDKIQSFQDKFICFLYITMYNKNKEVVILKLIALDMDGTLLSSNLEISKENLQAIQTAKEAGHIVMICSGRAKEDALKL
LEEYKLSLPVGASNGAIVYVDGKVINSRCLQNDKVYKLAKLLESEGFPYKLYTNKGVYSPYTWQDQVMQAFEENKHALDV
TLEELERITEKQKKSNLITDFQKIEDVVNNTELEISKFFILTFNAGHRAQLLSMLQEDTDIMVTASAPTNLEIMDKNGHK
GNGLKQMAAHFNIPIEDTVAIGDNFNDVPMLEAAGLSVAMGNAEEDVKKLCDVVTLTNNEHGVAHAIEQFVLKQTSSSK

Sequences:

>Translated_319_residues
MRDKIQSFQDKFICFLYITMYNKNKEVVILKLIALDMDGTLLSSNLEISKENLQAIQTAKEAGHIVMICSGRAKEDALKL
LEEYKLSLPVGASNGAIVYVDGKVINSRCLQNDKVYKLAKLLESEGFPYKLYTNKGVYSPYTWQDQVMQAFEENKHALDV
TLEELERITEKQKKSNLITDFQKIEDVVNNTELEISKFFILTFNAGHRAQLLSMLQEDTDIMVTASAPTNLEIMDKNGHK
GNGLKQMAAHFNIPIEDTVAIGDNFNDVPMLEAAGLSVAMGNAEEDVKKLCDVVTLTNNEHGVAHAIEQFVLKQTSSSK
>Mature_319_residues
MRDKIQSFQDKFICFLYITMYNKNKEVVILKLIALDMDGTLLSSNLEISKENLQAIQTAKEAGHIVMICSGRAKEDALKL
LEEYKLSLPVGASNGAIVYVDGKVINSRCLQNDKVYKLAKLLESEGFPYKLYTNKGVYSPYTWQDQVMQAFEENKHALDV
TLEELERITEKQKKSNLITDFQKIEDVVNNTELEISKFFILTFNAGHRAQLLSMLQEDTDIMVTASAPTNLEIMDKNGHK
GNGLKQMAAHFNIPIEDTVAIGDNFNDVPMLEAAGLSVAMGNAEEDVKKLCDVVTLTNNEHGVAHAIEQFVLKQTSSSK

Specific function: Putative phosphatase (Potential) [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=296, Percent_Identity=32.0945945945946, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787043, Length=291, Percent_Identity=26.4604810996564, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI87081790, Length=293, Percent_Identity=27.3037542662116, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 35734; Mature: 35734

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDKIQSFQDKFICFLYITMYNKNKEVVILKLIALDMDGTLLSSNLEISKENLQAIQTAK
CCCHHHHHHHCEEEEEEEEEECCCCCEEEEEEEEECCCCEEEECCCEECHHHHHHHHHHH
EAGHIVMICSGRAKEDALKLLEEYKLSLPVGASNGAIVYVDGKVINSRCLQNDKVYKLAK
HCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEHHHHCCCCHHHHHHH
LLESEGFPYKLYTNKGVYSPYTWQDQVMQAFEENKHALDVTLEELERITEKQKKSNLITD
HHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
FQKIEDVVNNTELEISKFFILTFNAGHRAQLLSMLQEDTDIMVTASAPTNLEIMDKNGHK
HHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCC
GNGLKQMAAHFNIPIEDTVAIGDNFNDVPMLEAAGLSVAMGNAEEDVKKLCDVVTLTNNE
CCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHCCCEEEECCCHHHHHHHHHEEEECCCC
HGVAHAIEQFVLKQTSSSK
CHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRDKIQSFQDKFICFLYITMYNKNKEVVILKLIALDMDGTLLSSNLEISKENLQAIQTAK
CCCHHHHHHHCEEEEEEEEEECCCCCEEEEEEEEECCCCEEEECCCEECHHHHHHHHHHH
EAGHIVMICSGRAKEDALKLLEEYKLSLPVGASNGAIVYVDGKVINSRCLQNDKVYKLAK
HCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEHHHHCCCCHHHHHHH
LLESEGFPYKLYTNKGVYSPYTWQDQVMQAFEENKHALDVTLEELERITEKQKKSNLITD
HHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
FQKIEDVVNNTELEISKFFILTFNAGHRAQLLSMLQEDTDIMVTASAPTNLEIMDKNGHK
HHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCC
GNGLKQMAAHFNIPIEDTVAIGDNFNDVPMLEAAGLSVAMGNAEEDVKKLCDVVTLTNNE
CCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHCCCEEEECCCHHHHHHHHHEEEECCCC
HGVAHAIEQFVLKQTSSSK
CHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]