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The map label for this gene is cobA [H]

Identifier: 118475808

GI number: 118475808

Start: 39936

End: 40811

Strand: Direct

Name: cobA [H]

Synonym: BALH_0032

Alternate gene names: 118475808

Gene position: 39936-40811 (Clockwise)

Preceding gene: 118475807

Following gene: 118475810

Centisome position: 0.76

GC content: 35.16

Gene sequence:

>876_bases
ATGTGGCAACAAAAAAGCTTTCAACAAAATGAAAAGGGAGTTTTATATTTAGTACCAACTCCTATTGGAAATTTAGAAGA
TATGACATTTCGTGCAATCCGAATTTTAAAAGAAGCTGATTTAATTGCTGCTGAAGATACGAGACAAACGAAAAAACTTT
GTAATTATTTTGAAATTGAAACGCCTGTTATGAGTTACCACGAGCATAATAAAGAAGTAAGTGGAAAGAAAATATTAGAG
AAGTTAGAAGAAGGAAAGACTGTGGCACTTGTTAGTGACGCTGGTATGCCGTGTATTTCCGATCCAGGCTATGATATTGT
TGTCGAGGCAGTAGCTGAGCAATATCATGTAATCCCGCTTCCTGGGGCAAATGCAGCACTTACAGCATTAATTGCATCAG
GCCTTCAAACAAAACAGTTTTATTTCTATGGGTTTTTACAAAGAAATAAAAAGGAAAGAAAAATGGAGTTAGAGAAGCTT
CGTTACGTACAAACTACAATGATGTTTTATGAAGCCCCTCACCGCCTGGATGATACTTTAATCTCGATGCAAGAAGTATT
AGGAAATAGAGAAATTGTATTATGTCGAGAGTTAACGAAAAAATTCGAGGAATTTATTCGAGGAACAGTTGAAGAAGCAA
TTGAGTGGACGAAACAAAATGAAGTTCGTGGTGAGTTTTGTATTTTAGTAGCTGGTTCAACGGAAGAGCCTGCTCCAGAA
GAACAATGGTGGGAATCTATTTCAGTATATAATCATATTGAACATTATATAAATGAAAAAGGTATGAATTCAAAAGAGGC
GATAAAAACAGTCGCTAAAGATCGAGATTTGTCGAAACGCGATGTATATCAAATCTATCATGTCGATAAAAAATAA

Upstream 100 bases:

>100_bases
GAATTTCATGAAGATAAGCGTACAGCTATGCAAGCAGAGTATTATTTTAAGCAATTAAATAGAAAACAAAAAGAAGAATA
TATGCAAAAAGGAGAACGCT

Downstream 100 bases:

>100_bases
GCTTCTCATAATTGAGAAGCTTATTTTGCTGTTTCGATATAATCTTGAAGTTCGTTTAAGATTTGCTCAGCGCCTTCTTT
GCTTAAGATAATTTTACCTT

Product: uroporphyrin-III C-methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MWQQKSFQQNEKGVLYLVPTPIGNLEDMTFRAIRILKEADLIAAEDTRQTKKLCNYFEIETPVMSYHEHNKEVSGKKILE
KLEEGKTVALVSDAGMPCISDPGYDIVVEAVAEQYHVIPLPGANAALTALIASGLQTKQFYFYGFLQRNKKERKMELEKL
RYVQTTMMFYEAPHRLDDTLISMQEVLGNREIVLCRELTKKFEEFIRGTVEEAIEWTKQNEVRGEFCILVAGSTEEPAPE
EQWWESISVYNHIEHYINEKGMNSKEAIKTVAKDRDLSKRDVYQIYHVDKK

Sequences:

>Translated_291_residues
MWQQKSFQQNEKGVLYLVPTPIGNLEDMTFRAIRILKEADLIAAEDTRQTKKLCNYFEIETPVMSYHEHNKEVSGKKILE
KLEEGKTVALVSDAGMPCISDPGYDIVVEAVAEQYHVIPLPGANAALTALIASGLQTKQFYFYGFLQRNKKERKMELEKL
RYVQTTMMFYEAPHRLDDTLISMQEVLGNREIVLCRELTKKFEEFIRGTVEEAIEWTKQNEVRGEFCILVAGSTEEPAPE
EQWWESISVYNHIEHYINEKGMNSKEAIKTVAKDRDLSKRDVYQIYHVDKK
>Mature_291_residues
MWQQKSFQQNEKGVLYLVPTPIGNLEDMTFRAIRILKEADLIAAEDTRQTKKLCNYFEIETPVMSYHEHNKEVSGKKILE
KLEEGKTVALVSDAGMPCISDPGYDIVVEAVAEQYHVIPLPGANAALTALIASGLQTKQFYFYGFLQRNKKERKMELEKL
RYVQTTMMFYEAPHRLDDTLISMQEVLGNREIVLCRELTKKFEEFIRGTVEEAIEWTKQNEVRGEFCILVAGSTEEPAPE
EQWWESISVYNHIEHYINEKGMNSKEAIKTVAKDRDLSKRDVYQIYHVDKK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=244, Percent_Identity=43.8524590163934, Blast_Score=197, Evalue=5e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 33725; Mature: 33725

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQQKSFQQNEKGVLYLVPTPIGNLEDMTFRAIRILKEADLIAAEDTRQTKKLCNYFEIE
CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
TPVMSYHEHNKEVSGKKILEKLEEGKTVALVSDAGMPCISDPGYDIVVEAVAEQYHVIPL
CHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCEEEEEC
PGANAALTALIASGLQTKQFYFYGFLQRNKKERKMELEKLRYVQTTMMFYEAPHRLDDTL
CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ISMQEVLGNREIVLCRELTKKFEEFIRGTVEEAIEWTKQNEVRGEFCILVAGSTEEPAPE
HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH
EQWWESISVYNHIEHYINEKGMNSKEAIKTVAKDRDLSKRDVYQIYHVDKK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHEEEEECCCC
>Mature Secondary Structure
MWQQKSFQQNEKGVLYLVPTPIGNLEDMTFRAIRILKEADLIAAEDTRQTKKLCNYFEIE
CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
TPVMSYHEHNKEVSGKKILEKLEEGKTVALVSDAGMPCISDPGYDIVVEAVAEQYHVIPL
CHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCEEEEEC
PGANAALTALIASGLQTKQFYFYGFLQRNKKERKMELEKLRYVQTTMMFYEAPHRLDDTL
CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ISMQEVLGNREIVLCRELTKKFEEFIRGTVEEAIEWTKQNEVRGEFCILVAGSTEEPAPE
HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH
EQWWESISVYNHIEHYINEKGMNSKEAIKTVAKDRDLSKRDVYQIYHVDKK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]