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The map label for this gene is 117921917

Identifier: 117921917

GI number: 117921917

Start: 4173500

End: 4174765

Strand: Direct

Name: 117921917

Synonym: Shewana3_3480

Alternate gene names: NA

Gene position: 4173500-4174765 (Clockwise)

Preceding gene: 117921915

Following gene: 117921920

Centisome position: 83.94

GC content: 51.26

Gene sequence:

>1266_bases
ATGAATACCTCCTCAGTAACACTCTGCATGCTGCTCGCCAGTACGGCCCTGCTCACAGGCTGCAACAGTGATAACAAAGA
TAGCGACACCACACCGCCCGCCAAACTGGTGCCCGCCCAAGTCGGTGAGCGACCACTGTTTTTGGTGCGTCAAATGCAGG
ACAGCAGCTTAAAAACCCGTTTAGCCCAGTGCGAAACCGACCATTTTTACCGTAGCGATTTTGCCATTGGTCATCGCGGC
GCGGCGATGCAATTCCCCGAACACACCAAAGAATCCTACCAAGCGGCCATCGACTCTGGCGCGGGTATCGTCGAGTGCGA
TGTGACTTTTACCGCCGATAAAGCCTTAGTCTGTCGCCATTCCCAGTGCGATCTCGCCAGCACAACCAATATTTTGGCTA
TTCCCGAACTTGCCAATAAATGTTCAGCCCCCTTTACGCCCGCCGATGCGGCCAATGGCGTTGCCGCCACAGCAACTTGT
TGCACCAGCGATATCACCCTCGCCGAATTTAAAATGTTAAAGGGCAAGATGGAGGGCGAAAATCCAAAGGCGACCAATGT
CGAGGAATTTATAAATGCCACGCCTAAGTGGCGCACCGATCTCTATGCGGGTAATGGCACCCTAATGACCCACGCCGAGA
GTATTGAGATGTTTAAAAAGGCTGGCGTAAAAATGACGCCCGAGCTAAAGGCCGCTAGTGTGGCTATGCCCTTCGATGGC
TTTACTCAGCAGGAGTACGCCCAGAAGATGCTCGATGAATATACCGCTGCGGGCGTCGATGCCTCGCAGGTATTCCCTCA
ATCCTTTAATTTAGAAGATGTAAAATACTGGATTGCTAACGCTCCCGAGTTTGGCAAGCAAGCAGTATATCTTGATGATA
GATACGATATTCACGCGGGTTTTGACCCACAGGACTCCTCCAGCTGGTTGCCATCAATGGCAGAACTTAAAGCCCAAGGC
GTAGAGATTGTCGCGCCACCACTCTGGGTGCTGGTGACCTTAGATGCGGATAAAAAAATCATTCCATCGGAATATGCCAA
AGCCGCGAAAGCAGCGGGACTTAAGATCATCACTTGGAGCTTAGAGCGCTCAGGATTATTGAAAGATGGCGGCGGTTGGT
ATTATCAAAGCATTACCGATGCCATTGATAATGAAGGCGATACCTACGAGCTGCTCGATGTGCTCGCCAAAGATGTGGGT
GTGATTGGCGTCTTCTCTGACTGGCCAGCGACCGTGACTTACTATGCCAACTGCATGGATTTATAG

Upstream 100 bases:

>100_bases
TTTTCTTGTTTTAGTCATAAAACTGAGCTTATTTAGTCATATAGCAATTTTAGAGTATGAGGGACCCCATTAATAAGTAA
TCAATAATTTAGGAAAGATG

Downstream 100 bases:

>100_bases
ACCGAATAAATAGGCTAAATTCAAAACCGAGAAACAAAAAAGCGTTAGCAAATACTGCTAACGCTTTTTATTAACAGATT
CTTTTTACTTAAAAAGATGC

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphoryl Diester Phosphodiesterase Family Protein; Glycerophosphoryl Diester Phosphodiesterase Family; Glycerophosphodiesterase

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MNTSSVTLCMLLASTALLTGCNSDNKDSDTTPPAKLVPAQVGERPLFLVRQMQDSSLKTRLAQCETDHFYRSDFAIGHRG
AAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKALVCRHSQCDLASTTNILAIPELANKCSAPFTPADAANGVAATATC
CTSDITLAEFKMLKGKMEGENPKATNVEEFINATPKWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVAMPFDG
FTQQEYAQKMLDEYTAAGVDASQVFPQSFNLEDVKYWIANAPEFGKQAVYLDDRYDIHAGFDPQDSSSWLPSMAELKAQG
VEIVAPPLWVLVTLDADKKIIPSEYAKAAKAAGLKIITWSLERSGLLKDGGGWYYQSITDAIDNEGDTYELLDVLAKDVG
VIGVFSDWPATVTYYANCMDL

Sequences:

>Translated_421_residues
MNTSSVTLCMLLASTALLTGCNSDNKDSDTTPPAKLVPAQVGERPLFLVRQMQDSSLKTRLAQCETDHFYRSDFAIGHRG
AAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKALVCRHSQCDLASTTNILAIPELANKCSAPFTPADAANGVAATATC
CTSDITLAEFKMLKGKMEGENPKATNVEEFINATPKWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVAMPFDG
FTQQEYAQKMLDEYTAAGVDASQVFPQSFNLEDVKYWIANAPEFGKQAVYLDDRYDIHAGFDPQDSSSWLPSMAELKAQG
VEIVAPPLWVLVTLDADKKIIPSEYAKAAKAAGLKIITWSLERSGLLKDGGGWYYQSITDAIDNEGDTYELLDVLAKDVG
VIGVFSDWPATVTYYANCMDL
>Mature_421_residues
MNTSSVTLCMLLASTALLTGCNSDNKDSDTTPPAKLVPAQVGERPLFLVRQMQDSSLKTRLAQCETDHFYRSDFAIGHRG
AAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKALVCRHSQCDLASTTNILAIPELANKCSAPFTPADAANGVAATATC
CTSDITLAEFKMLKGKMEGENPKATNVEEFINATPKWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVAMPFDG
FTQQEYAQKMLDEYTAAGVDASQVFPQSFNLEDVKYWIANAPEFGKQAVYLDDRYDIHAGFDPQDSSSWLPSMAELKAQG
VEIVAPPLWVLVTLDADKKIIPSEYAKAAKAAGLKIITWSLERSGLLKDGGGWYYQSITDAIDNEGDTYELLDVLAKDVG
VIGVFSDWPATVTYYANCMDL

Specific function: Unknown

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45787; Mature: 45787

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSSVTLCMLLASTALLTGCNSDNKDSDTTPPAKLVPAQVGERPLFLVRQMQDSSLKTR
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHCCCCEEHHHHHHHHHHHHH
LAQCETDHFYRSDFAIGHRGAAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKALVCRH
HHHHCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEC
SQCDLASTTNILAIPELANKCSAPFTPADAANGVAATATCCTSDITLAEFKMLKGKMEGE
CCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCEEEHHHHCCCCHHHHHHHHHCCCCCC
NPKATNVEEFINATPKWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVAMPFDG
CCCCCCHHHHHCCCCCCCCEEEECCCEEEECHHHHHHHHHCCCCCCCCCCCCEEECCCCC
FTQQEYAQKMLDEYTAAGVDASQVFPQSFNLEDVKYWIANAPEFGKQAVYLDDRYDIHAG
CCHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEECCCEEEECC
FDPQDSSSWLPSMAELKAQGVEIVAPPLWVLVTLDADKKIIPSEYAKAAKAAGLKIITWS
CCCCCCCCCCCHHHHHHHCCCEEEECCEEEEEEECCCCCCCCHHHHHHHHHCCEEEEEEE
LERSGLLKDGGGWYYQSITDAIDNEGDTYELLDVLAKDVGVIGVFSDWPATVTYYANCMD
CCCCCCEECCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEEEECC
L
C
>Mature Secondary Structure
MNTSSVTLCMLLASTALLTGCNSDNKDSDTTPPAKLVPAQVGERPLFLVRQMQDSSLKTR
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHCCCCEEHHHHHHHHHHHHH
LAQCETDHFYRSDFAIGHRGAAMQFPEHTKESYQAAIDSGAGIVECDVTFTADKALVCRH
HHHHCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEC
SQCDLASTTNILAIPELANKCSAPFTPADAANGVAATATCCTSDITLAEFKMLKGKMEGE
CCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCEEEHHHHCCCCHHHHHHHHHCCCCCC
NPKATNVEEFINATPKWRTDLYAGNGTLMTHAESIEMFKKAGVKMTPELKAASVAMPFDG
CCCCCCHHHHHCCCCCCCCEEEECCCEEEECHHHHHHHHHCCCCCCCCCCCCEEECCCCC
FTQQEYAQKMLDEYTAAGVDASQVFPQSFNLEDVKYWIANAPEFGKQAVYLDDRYDIHAG
CCHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEECCCEEEECC
FDPQDSSSWLPSMAELKAQGVEIVAPPLWVLVTLDADKKIIPSEYAKAAKAAGLKIITWS
CCCCCCCCCCCHHHHHHHCCCEEEECCEEEEEEECCCCCCCCHHHHHHHHHCCEEEEEEE
LERSGLLKDGGGWYYQSITDAIDNEGDTYELLDVLAKDVGVIGVFSDWPATVTYYANCMD
CCCCCCEECCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEEEECC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA