Click here to switch to the map view.

The map label for this gene is 117921865

Identifier: 117921865

GI number: 117921865

Start: 4103707

End: 4105332

Strand: Direct

Name: 117921865

Synonym: Shewana3_3428

Alternate gene names: NA

Gene position: 4103707-4105332 (Clockwise)

Preceding gene: 117921864

Following gene: 117921866

Centisome position: 82.53

GC content: 52.83

Gene sequence:

>1626_bases
ATGGACAATCTAAGACCAGCTCTAAGCAATAAGGAACACGGCGCGGTACTGCTTATCGTCTTAGTCTTCAGTCTATTAGC
GAGTTTGCTGGTGGTCACGTCCCTCAGGGATAACCTAGTGCAAGAGCGACTGAGCGGTAACTTTCAAAAGCAAGTCAATG
CGCAGCTACTCGCCGAACAGGGGATGCATGAGAGTTACAACCAACTCAAGACTCAGCTGCAGCGCGCGCCCAATCAAGGC
CTGCAAACCCTTTATGAGCAACTCCCCGCCGAAGCCGATGGCAGCCTCGAAGGCAGCAGCTATGCCCTCGAAAACGGCCA
AATCGCCGGGGCCGATCTTAGCCTCGACAGTCGTGGCAATCATTTAGAGGGTGAGGCCAAACTCAACGCCCAGTTCACAC
TGCAGGGCAGTCACGGAAATACGATTTTCAATGATGCGATTGTGTCCTGCGAAAGCTTGAATTTAACTGGCAGCAGTAGC
ATCGATGGCTACGATTCCCGTAAAGGCGCCTATGGCGATAGCATCAGTAATGGCCAAGGTGGCAGTGAGCTTAATCAACA
TGGCAAAGGCAATGTCACGACCATTGAGCCCAATGCCAATATTACGCTCACGGGCAACGCACCAATTTACGGCGATGTTA
GCGCCACGGGCAGCGTCACCCTCACCGGCTCGTCGGATATCCACGGCAGCATTCAAGCCAATAATGATGTCACCCTAGGC
ACAGGGACCATAGGCGGGAATGTCGCGGCGGGCAATAACTTTAACTTGGCCAATAGCGGCACGGTGGCAGGTTCGGTCAA
AGCCAATAATAATGCCGCCACGGCGCCCAAAGCCCAAGTGAATGGCACACTGCAATATGGCGGCGACGGTAACTTTCATC
AGGACAGCCAGATTGGCAACTTAGTCAACGCACGCCCTAATGTGCCGCCCGTGCCGACAAAATCCTGTGACCCATTAGAT
ATTGGCGCTGTGATGGGCGGCTTTAAGATGCCAAATAACGGCGCGCGCAGGATTGATTCAAACGCCAATGTCACTATCAC
GCCATCGGGGTCGAGTAAGACCGAACTCGGCTGGAAAGGTGATTATTTCCCGAGCCTTACCCCCACGTCAGAAAACATCT
TCGGTAGTGACACCCCAGTATTTAACCTCGACAGCTTAGTCATGAGCGCCGATGGCGTGCTCAATATCAGTGGCGGCGAT
GTCACCCTGATAGTCAATGGTGACTTTAAGATGAGTGGCTCGAATCAGCTAAATATTGCCCCGGGCTCGAGCCTTACGCT
GTTTGTGGGCGGTGAAGTCGCCTTTACGGCGGGAACAAACAACGGTAACAACATTAAGGGACAAACCCTAACCGACAGCA
ACAAGCCGCCACTGTCTATTTTTTCTGGCTCGGATAAGGATGTCACCGTCAGCGGTAATGTGCCGATTTATGCCGCGCTC
TACGCCCCCAAATCTAAGGTTAATCTTCCCGGCGGCCCAGAGATTTTCGGCTCGGTGAGGGGCAAATCCATCACAGCCAC
CGGAAATGGAAAAATCCATTATGACAATGCCTTAGGCGCTGCCGACTTAGGCGAAGGTAATGCTAATCCCGCGGTCATCC
TGCTCAAGCAATGGCAATATTTGTAG

Upstream 100 bases:

>100_bases
GCAATATGGCCAAGGGATCCAGCTCGATATCGCCCTGCGTAAGCCCCTATGGCAACAAGCCCTCAACAGCCAACAGAACC
CATAAAGCAAGGAAGCCATA

Downstream 100 bases:

>100_bases
AGCTAATGCCCACGTTTAACTCACTCGCTGGCTCCCTCTCCAAAGGGATAGGGATTGTGTAAATTTCAAACTGAGAGTTA
GATCACGCGCAAAACTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MDNLRPALSNKEHGAVLLIVLVFSLLASLLVVTSLRDNLVQERLSGNFQKQVNAQLLAEQGMHESYNQLKTQLQRAPNQG
LQTLYEQLPAEADGSLEGSSYALENGQIAGADLSLDSRGNHLEGEAKLNAQFTLQGSHGNTIFNDAIVSCESLNLTGSSS
IDGYDSRKGAYGDSISNGQGGSELNQHGKGNVTTIEPNANITLTGNAPIYGDVSATGSVTLTGSSDIHGSIQANNDVTLG
TGTIGGNVAAGNNFNLANSGTVAGSVKANNNAATAPKAQVNGTLQYGGDGNFHQDSQIGNLVNARPNVPPVPTKSCDPLD
IGAVMGGFKMPNNGARRIDSNANVTITPSGSSKTELGWKGDYFPSLTPTSENIFGSDTPVFNLDSLVMSADGVLNISGGD
VTLIVNGDFKMSGSNQLNIAPGSSLTLFVGGEVAFTAGTNNGNNIKGQTLTDSNKPPLSIFSGSDKDVTVSGNVPIYAAL
YAPKSKVNLPGGPEIFGSVRGKSITATGNGKIHYDNALGAADLGEGNANPAVILLKQWQYL

Sequences:

>Translated_541_residues
MDNLRPALSNKEHGAVLLIVLVFSLLASLLVVTSLRDNLVQERLSGNFQKQVNAQLLAEQGMHESYNQLKTQLQRAPNQG
LQTLYEQLPAEADGSLEGSSYALENGQIAGADLSLDSRGNHLEGEAKLNAQFTLQGSHGNTIFNDAIVSCESLNLTGSSS
IDGYDSRKGAYGDSISNGQGGSELNQHGKGNVTTIEPNANITLTGNAPIYGDVSATGSVTLTGSSDIHGSIQANNDVTLG
TGTIGGNVAAGNNFNLANSGTVAGSVKANNNAATAPKAQVNGTLQYGGDGNFHQDSQIGNLVNARPNVPPVPTKSCDPLD
IGAVMGGFKMPNNGARRIDSNANVTITPSGSSKTELGWKGDYFPSLTPTSENIFGSDTPVFNLDSLVMSADGVLNISGGD
VTLIVNGDFKMSGSNQLNIAPGSSLTLFVGGEVAFTAGTNNGNNIKGQTLTDSNKPPLSIFSGSDKDVTVSGNVPIYAAL
YAPKSKVNLPGGPEIFGSVRGKSITATGNGKIHYDNALGAADLGEGNANPAVILLKQWQYL
>Mature_541_residues
MDNLRPALSNKEHGAVLLIVLVFSLLASLLVVTSLRDNLVQERLSGNFQKQVNAQLLAEQGMHESYNQLKTQLQRAPNQG
LQTLYEQLPAEADGSLEGSSYALENGQIAGADLSLDSRGNHLEGEAKLNAQFTLQGSHGNTIFNDAIVSCESLNLTGSSS
IDGYDSRKGAYGDSISNGQGGSELNQHGKGNVTTIEPNANITLTGNAPIYGDVSATGSVTLTGSSDIHGSIQANNDVTLG
TGTIGGNVAAGNNFNLANSGTVAGSVKANNNAATAPKAQVNGTLQYGGDGNFHQDSQIGNLVNARPNVPPVPTKSCDPLD
IGAVMGGFKMPNNGARRIDSNANVTITPSGSSKTELGWKGDYFPSLTPTSENIFGSDTPVFNLDSLVMSADGVLNISGGD
VTLIVNGDFKMSGSNQLNIAPGSSLTLFVGGEVAFTAGTNNGNNIKGQTLTDSNKPPLSIFSGSDKDVTVSGNVPIYAAL
YAPKSKVNLPGGPEIFGSVRGKSITATGNGKIHYDNALGAADLGEGNANPAVILLKQWQYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55938; Mature: 55938

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLRPALSNKEHGAVLLIVLVFSLLASLLVVTSLRDNLVQERLSGNFQKQVNAQLLAEQ
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GMHESYNQLKTQLQRAPNQGLQTLYEQLPAEADGSLEGSSYALENGQIAGADLSLDSRGN
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCEEECCEEEECCCCC
HLEGEAKLNAQFTLQGSHGNTIFNDAIVSCESLNLTGSSSIDGYDSRKGAYGDSISNGQG
CCCCCEEEEEEEEEECCCCCEEEHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
GSELNQHGKGNVTTIEPNANITLTGNAPIYGDVSATGSVTLTGSSDIHGSIQANNDVTLG
CCHHHHCCCCCEEEECCCCCEEEECCCCEEECCCCCCEEEEECCCCCCEEEECCCCEEEE
TGTIGGNVAAGNNFNLANSGTVAGSVKANNNAATAPKAQVNGTLQYGGDGNFHQDSQIGN
ECCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEECEEEEECCCCCCCCCHHHCH
LVNARPNVPPVPTKSCDPLDIGAVMGGFKMPNNGARRIDSNANVTITPSGSSKTELGWKG
HHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHEECCCCCEEEEECCCCCCCCCCCC
DYFPSLTPTSENIFGSDTPVFNLDSLVMSADGVLNISGGDVTLIVNGDFKMSGSNQLNIA
CCCCCCCCCCCCCCCCCCCEEEHHHHEEECCCEEEECCCCEEEEECCCEEECCCCEEEEC
PGSSLTLFVGGEVAFTAGTNNGNNIKGQTLTDSNKPPLSIFSGSDKDVTVSGNVPIYAAL
CCCEEEEEECCEEEEEECCCCCCCCCCCEECCCCCCCEEEECCCCCCEEEECCCCEEEEE
YAPKSKVNLPGGPEIFGSVRGKSITATGNGKIHYDNALGAADLGEGNANPAVILLKQWQY
ECCCCCCCCCCCHHHHEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCC
L
C
>Mature Secondary Structure
MDNLRPALSNKEHGAVLLIVLVFSLLASLLVVTSLRDNLVQERLSGNFQKQVNAQLLAEQ
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GMHESYNQLKTQLQRAPNQGLQTLYEQLPAEADGSLEGSSYALENGQIAGADLSLDSRGN
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCEEECCEEEECCCCC
HLEGEAKLNAQFTLQGSHGNTIFNDAIVSCESLNLTGSSSIDGYDSRKGAYGDSISNGQG
CCCCCEEEEEEEEEECCCCCEEEHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
GSELNQHGKGNVTTIEPNANITLTGNAPIYGDVSATGSVTLTGSSDIHGSIQANNDVTLG
CCHHHHCCCCCEEEECCCCCEEEECCCCEEECCCCCCEEEEECCCCCCEEEECCCCEEEE
TGTIGGNVAAGNNFNLANSGTVAGSVKANNNAATAPKAQVNGTLQYGGDGNFHQDSQIGN
ECCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEECEEEEECCCCCCCCCHHHCH
LVNARPNVPPVPTKSCDPLDIGAVMGGFKMPNNGARRIDSNANVTITPSGSSKTELGWKG
HHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHEECCCCCEEEEECCCCCCCCCCCC
DYFPSLTPTSENIFGSDTPVFNLDSLVMSADGVLNISGGDVTLIVNGDFKMSGSNQLNIA
CCCCCCCCCCCCCCCCCCCEEEHHHHEEECCCEEEECCCCEEEEECCCEEECCCCEEEEC
PGSSLTLFVGGEVAFTAGTNNGNNIKGQTLTDSNKPPLSIFSGSDKDVTVSGNVPIYAAL
CCCEEEEEECCEEEEEECCCCCCCCCCCEECCCCCCCEEEECCCCCCEEEECCCCEEEEE
YAPKSKVNLPGGPEIFGSVRGKSITATGNGKIHYDNALGAADLGEGNANPAVILLKQWQY
ECCCCCCCCCCCHHHHEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA