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The map label for this gene is prkB [H]

Identifier: 117921837

GI number: 117921837

Start: 4068804

End: 4069691

Strand: Direct

Name: prkB [H]

Synonym: Shewana3_3400

Alternate gene names: 117921837

Gene position: 4068804-4069691 (Clockwise)

Preceding gene: 117921836

Following gene: 117921840

Centisome position: 81.83

GC content: 51.01

Gene sequence:

>888_bases
ATGTCAGCAAAACATCCGATTATTGCAGTTACAGGCTCATCCGGCGCAGGAACCACCACCACTACTACCGCCTTTAGCCA
TATCTTTCGCCAGCTAGGGATTAATGCCGCCTTTGTAGAAGGCGACAGTTTTCATCACTTTACCCGTGCAGAGATGGAAG
TGATGATACGCAAATCCCAGGCCGAGAATCGCAATCTGAGTTACTTTGGCCCCGAGGCCAATAACTTTGCCCGTCTAGAG
CAATGCTTTCGCGATTACGGCGCCACAGGCCAAGGCGAAACCCGCAGCTATTTACATACCTTCGATGAAGCTGTGCCCTT
CAACCAAATGCCTGGCACCTTCACCCAATGGCGTCCACTGCCCGAAAACACCGATATGTTGTATTACGAAGGCTTACATG
GTGGCGTAGTCACAGGCGATGCCAACGTTGCCCAGCATGTGGATTTGCTGATCGGCATGGTGCCTATCGTCAACTTAGAG
TGGATCCAAAAGATCATCCGTGACACCTCGGAGCGAGGTCATAGCCGCGAAAAAGTCATGGGCTCAATCGTGCGCAGCAT
GGACGATTACATTAAGCATATGACGCCGCAGTTTTCCCGTACCCATATCAACTTCCAACGGGTGCCGACGGTCGATACCT
CTAACCCCTTTAGCGCCAAAGATATTCCAAGCCTAGATGAAAGCTTTGTGGTGATCCGTTTTCGCGGCATCAACAACGTC
GACTTCCCCTATTATTTGAGCATGATCCAAGGCTCCTTTATGTCGCGGGTCAACACCTTAGTGGTGCCGGGCGGCAAAAT
GTCACTCGCTATGGAGCTGATCCTCACACCACTGATTAAAGATTTAATGGAAAAACGCCAGCAGCTGAATAGCCCGCAGG
CGAACTGA

Upstream 100 bases:

>100_bases
CGGCAAGATTGACCACCAGTATCCCTGTGCCGTATAAATAGCTTATACGGTTTATCGCTCTAGATGAGCGGCTCTTTAGG
TTCCTAGCTAGGTAGAAAAA

Downstream 100 bases:

>100_bases
GATAGAGTGAACGTTTGACTAAAGGCTAATGAAATAAAGCCTTTTTGAGCAATAGATTAAGCTTGATTTAAGCCATTGAA
GTTAATCTTATTGGCATCGG

Product: phosphoribulokinase/uridine kinase

Products: NA

Alternate protein names: PRK; PRKase; Phosphopentokinase [H]

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSAKHPIIAVTGSSGAGTTTTTTAFSHIFRQLGINAAFVEGDSFHHFTRAEMEVMIRKSQAENRNLSYFGPEANNFARLE
QCFRDYGATGQGETRSYLHTFDEAVPFNQMPGTFTQWRPLPENTDMLYYEGLHGGVVTGDANVAQHVDLLIGMVPIVNLE
WIQKIIRDTSERGHSREKVMGSIVRSMDDYIKHMTPQFSRTHINFQRVPTVDTSNPFSAKDIPSLDESFVVIRFRGINNV
DFPYYLSMIQGSFMSRVNTLVVPGGKMSLAMELILTPLIKDLMEKRQQLNSPQAN

Sequences:

>Translated_295_residues
MSAKHPIIAVTGSSGAGTTTTTTAFSHIFRQLGINAAFVEGDSFHHFTRAEMEVMIRKSQAENRNLSYFGPEANNFARLE
QCFRDYGATGQGETRSYLHTFDEAVPFNQMPGTFTQWRPLPENTDMLYYEGLHGGVVTGDANVAQHVDLLIGMVPIVNLE
WIQKIIRDTSERGHSREKVMGSIVRSMDDYIKHMTPQFSRTHINFQRVPTVDTSNPFSAKDIPSLDESFVVIRFRGINNV
DFPYYLSMIQGSFMSRVNTLVVPGGKMSLAMELILTPLIKDLMEKRQQLNSPQAN
>Mature_294_residues
SAKHPIIAVTGSSGAGTTTTTTAFSHIFRQLGINAAFVEGDSFHHFTRAEMEVMIRKSQAENRNLSYFGPEANNFARLEQ
CFRDYGATGQGETRSYLHTFDEAVPFNQMPGTFTQWRPLPENTDMLYYEGLHGGVVTGDANVAQHVDLLIGMVPIVNLEW
IQKIIRDTSERGHSREKVMGSIVRSMDDYIKHMTPQFSRTHINFQRVPTVDTSNPFSAKDIPSLDESFVVIRFRGINNVD
FPYYLSMIQGSFMSRVNTLVVPGGKMSLAMELILTPLIKDLMEKRQQLNSPQAN

Specific function: Unknown

COG id: COG3954

COG function: function code C; Phosphoribulokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoribulokinase family [H]

Homologues:

Organism=Escherichia coli, GI2367214, Length=287, Percent_Identity=71.7770034843206, Blast_Score=447, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006082
- InterPro:   IPR006083 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.19 [H]

Molecular weight: Translated: 33204; Mature: 33073

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00567 PHOSPHORIBULOKINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKHPIIAVTGSSGAGTTTTTTAFSHIFRQLGINAAFVEGDSFHHFTRAEMEVMIRKSQ
CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHH
AENRNLSYFGPEANNFARLEQCFRDYGATGQGETRSYLHTFDEAVPFNQMPGTFTQWRPL
CCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCC
PENTDMLYYEGLHGGVVTGDANVAQHVDLLIGMVPIVNLEWIQKIIRDTSERGHSREKVM
CCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHH
GSIVRSMDDYIKHMTPQFSRTHINFQRVPTVDTSNPFSAKDIPSLDESFVVIRFRGINNV
HHHHHHHHHHHHHCCCCHHHHEECEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DFPYYLSMIQGSFMSRVNTLVVPGGKMSLAMELILTPLIKDLMEKRQQLNSPQAN
CHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAKHPIIAVTGSSGAGTTTTTTAFSHIFRQLGINAAFVEGDSFHHFTRAEMEVMIRKSQ
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHH
AENRNLSYFGPEANNFARLEQCFRDYGATGQGETRSYLHTFDEAVPFNQMPGTFTQWRPL
CCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCC
PENTDMLYYEGLHGGVVTGDANVAQHVDLLIGMVPIVNLEWIQKIIRDTSERGHSREKVM
CCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHH
GSIVRSMDDYIKHMTPQFSRTHINFQRVPTVDTSNPFSAKDIPSLDESFVVIRFRGINNV
HHHHHHHHHHHHHCCCCHHHHEECEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DFPYYLSMIQGSFMSRVNTLVVPGGKMSLAMELILTPLIKDLMEKRQQLNSPQAN
CHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1756168; 7940673; 7984428; 7920643 [H]