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The map label for this gene is 117921833

Identifier: 117921833

GI number: 117921833

Start: 4065211

End: 4066812

Strand: Reverse

Name: 117921833

Synonym: Shewana3_3396

Alternate gene names: NA

Gene position: 4066812-4065211 (Counterclockwise)

Preceding gene: 117921834

Following gene: 117921832

Centisome position: 81.79

GC content: 52.87

Gene sequence:

>1602_bases
GTGGCAATCATAGATCCCATAGTGACAGGCTTAAATTCCGGTTGGTTACATACCGACGCCAGTCAACTGCAAGAGAACCA
GCAATTTGAAGCCGATGTGGTAATTGTAGGCACGGGCGCAGGCGGCGGTGTGGCGGCGGAAATCCTTACCCAAGCTGGAC
TCAGTGTGATCATGATTGAAGCGGGGCCGCTTAAATCCTCCAGTGACTTTAATATGGAAGAGCGAGTCGCTTACCCTAAT
TTGTATCAACAGGCGGCCGCGATGAAAACCGCCGATAAGGCGATTGGTATTTTTCAAGGTCGCGCCGTAGGCGGCTCGAC
CACCATCAATTGGACCACCTCCATTCGTACCCCGAAGGAAGCCTTAGCCTTTTGGGCGCAGCATAAATCCGTTGCCGGAC
TCGATCCCGAGGCCCTTGCCCCTTGGTTCGAGCAGATGGAGCAGCGGCTCAACATTCACGAATGGAATTATGAACCTAAC
CGCAATAATGGCGCCCTCAAGCAAGGCTGTATCAACCTAGGTTGGGATTACACCGTCATTAAGCGTAACGTGGCGGGTTG
TTGGAATACTGGCTATTGCGGCATGGGCTGCCCAGTTAATGCTAAACAGTCGATGTTAGTCACGACGATTCCGACCGCAT
TAGAGAAGGGTGCGCAGCTTGTTAGCCGTGCCAAAGTCGTTAAGATTGAACACCATAATGGCCAAGTGTTTGCCCTCAAG
GCGCAGGCGCTCGATGTTAATTTACGGCCGACGTCGGTCGAGCTGTTATTTAAAGCCAAACACTATATTTTAAGCGCTGG
CGCTATCCACACGCCGACCTTAATGATGCGCTCCGAGGTGCCCGATCCCTATCAATTGTTGGGCAAGCGTACCTTTTTAC
ATCCTACAGTGCTGTCGGGCGGCGTATTTGCCGATGCGATTAATGCCCACAGCGGTGCGCCGCAATCTATCTATTCCGAT
GAATTTGTTTGGAAAAATGGCGCCGATGGCGAGTTAGGCTACAAGCTTGAAGTGCCGCCGGTGCATCCGATTTTGATCGC
CTCTAAGACCATAGGTTACGGCATAAGCCATGCCGAATTGATGGCGCAGTTTAATCAGCTACAGGTCACTATCGCCTTAA
TCCGCGACGGTTATCATCCCGATAGCCAAGGTGGGCAGGTGCATCTCACCTCGACAGGATTTGCCTTGGATTATCCGCTC
ACCGAGGCCTTTTGGCGGGCAGCGCGGCGGGCGTACGCCAGCATGGCCGAATTACAATTCTCGGCGGGGGCATTAAAAGT
GTTGCCCATCAGTGATGGTATGCCATATCTGTCGTCATGGAAGGAGGCAAAAGAGAGCATAGCGCAAATGGATTTAGCAC
CGCTGCGCACAGTCGTTGCCTCGGCGCACGTGATGGGCGGTTGTCCCTTTGGTGAGGATGAAAAACTCTCTATGGTCAAT
AGTTTTGGTCAGTCACATTATCTGGATAATCTGTCGGTGATGGACGGCTCAATCTTCCCGACCAGCCTTGGGGCCAATCC
GCAGCTGTCGATTTATGGCATTACCGCGCGCAATGCCACGGCGTTAGCACAAAAGCTCACCGATGGCCGCGAGCCGCAAT
AG

Upstream 100 bases:

>100_bases
TGTCCCGAGCATTGGAGCCGACTCCACTACGCCAAGCCTGAATTGTTCAAATAGGCTGAATTTATAATAATAACAATAAT
GTAAGAATGGAGTATTCCAA

Downstream 100 bases:

>100_bases
CGTGGAGCCTGTATGCAATCTATAGAACCCTTGGAGGGTGGCTGTTTATGTGGGGCGATTCGTTATCGGATTGAGGGCAA
GCCCTTCGACGCCGATTATT

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MAIIDPIVTGLNSGWLHTDASQLQENQQFEADVVIVGTGAGGGVAAEILTQAGLSVIMIEAGPLKSSSDFNMEERVAYPN
LYQQAAAMKTADKAIGIFQGRAVGGSTTINWTTSIRTPKEALAFWAQHKSVAGLDPEALAPWFEQMEQRLNIHEWNYEPN
RNNGALKQGCINLGWDYTVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPTALEKGAQLVSRAKVVKIEHHNGQVFALK
AQALDVNLRPTSVELLFKAKHYILSAGAIHTPTLMMRSEVPDPYQLLGKRTFLHPTVLSGGVFADAINAHSGAPQSIYSD
EFVWKNGADGELGYKLEVPPVHPILIASKTIGYGISHAELMAQFNQLQVTIALIRDGYHPDSQGGQVHLTSTGFALDYPL
TEAFWRAARRAYASMAELQFSAGALKVLPISDGMPYLSSWKEAKESIAQMDLAPLRTVVASAHVMGGCPFGEDEKLSMVN
SFGQSHYLDNLSVMDGSIFPTSLGANPQLSIYGITARNATALAQKLTDGREPQ

Sequences:

>Translated_533_residues
MAIIDPIVTGLNSGWLHTDASQLQENQQFEADVVIVGTGAGGGVAAEILTQAGLSVIMIEAGPLKSSSDFNMEERVAYPN
LYQQAAAMKTADKAIGIFQGRAVGGSTTINWTTSIRTPKEALAFWAQHKSVAGLDPEALAPWFEQMEQRLNIHEWNYEPN
RNNGALKQGCINLGWDYTVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPTALEKGAQLVSRAKVVKIEHHNGQVFALK
AQALDVNLRPTSVELLFKAKHYILSAGAIHTPTLMMRSEVPDPYQLLGKRTFLHPTVLSGGVFADAINAHSGAPQSIYSD
EFVWKNGADGELGYKLEVPPVHPILIASKTIGYGISHAELMAQFNQLQVTIALIRDGYHPDSQGGQVHLTSTGFALDYPL
TEAFWRAARRAYASMAELQFSAGALKVLPISDGMPYLSSWKEAKESIAQMDLAPLRTVVASAHVMGGCPFGEDEKLSMVN
SFGQSHYLDNLSVMDGSIFPTSLGANPQLSIYGITARNATALAQKLTDGREPQ
>Mature_532_residues
AIIDPIVTGLNSGWLHTDASQLQENQQFEADVVIVGTGAGGGVAAEILTQAGLSVIMIEAGPLKSSSDFNMEERVAYPNL
YQQAAAMKTADKAIGIFQGRAVGGSTTINWTTSIRTPKEALAFWAQHKSVAGLDPEALAPWFEQMEQRLNIHEWNYEPNR
NNGALKQGCINLGWDYTVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPTALEKGAQLVSRAKVVKIEHHNGQVFALKA
QALDVNLRPTSVELLFKAKHYILSAGAIHTPTLMMRSEVPDPYQLLGKRTFLHPTVLSGGVFADAINAHSGAPQSIYSDE
FVWKNGADGELGYKLEVPPVHPILIASKTIGYGISHAELMAQFNQLQVTIALIRDGYHPDSQGGQVHLTSTGFALDYPLT
EAFWRAARRAYASMAELQFSAGALKVLPISDGMPYLSSWKEAKESIAQMDLAPLRTVVASAHVMGGCPFGEDEKLSMVNS
FGQSHYLDNLSVMDGSIFPTSLGANPQLSIYGITARNATALAQKLTDGREPQ

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GMC oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000172
- InterPro:   IPR007867 [H]

Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]

EC number: NA

Molecular weight: Translated: 57643; Mature: 57512

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIDPIVTGLNSGWLHTDASQLQENQQFEADVVIVGTGAGGGVAAEILTQAGLSVIMIE
CCCHHHHHHCCCCCCEECCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEE
AGPLKSSSDFNMEERVAYPNLYQQAAAMKTADKAIGIFQGRAVGGSTTINWTTSIRTPKE
CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCCCHHH
ALAFWAQHKSVAGLDPEALAPWFEQMEQRLNIHEWNYEPNRNNGALKQGCINLGWDYTVI
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHCCCCCCCCEEEE
KRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPTALEKGAQLVSRAKVVKIEHHNGQVFALK
ECCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCEEEEEEEECCCEEEEEE
AQALDVNLRPTSVELLFKAKHYILSAGAIHTPTLMMRSEVPDPYQLLGKRTFLHPTVLSG
EEEEEEECCCCCEEEEEHHHHHEEECCCCCCCEEEEECCCCCHHHHHCCCCEECCHHHCC
GVFADAINAHSGAPQSIYSDEFVWKNGADGELGYKLEVPPVHPILIASKTIGYGISHAEL
CHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCEEEEEECHHCCCCHHHHH
MAQFNQLQVTIALIRDGYHPDSQGGQVHLTSTGFALDYPLTEAFWRAARRAYASMAELQF
HHHHHHHEEEEEEEECCCCCCCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHEE
SAGALKVLPISDGMPYLSSWKEAKESIAQMDLAPLRTVVASAHVMGGCPFGEDEKLSMVN
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
SFGQSHYLDNLSVMDGSIFPTSLGANPQLSIYGITARNATALAQKLTDGREPQ
HCCHHHCCCCCEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AIIDPIVTGLNSGWLHTDASQLQENQQFEADVVIVGTGAGGGVAAEILTQAGLSVIMIE
CCHHHHHHCCCCCCEECCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEE
AGPLKSSSDFNMEERVAYPNLYQQAAAMKTADKAIGIFQGRAVGGSTTINWTTSIRTPKE
CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCCCHHH
ALAFWAQHKSVAGLDPEALAPWFEQMEQRLNIHEWNYEPNRNNGALKQGCINLGWDYTVI
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHCCCCCCCCEEEE
KRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPTALEKGAQLVSRAKVVKIEHHNGQVFALK
ECCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCEEEEEEEECCCEEEEEE
AQALDVNLRPTSVELLFKAKHYILSAGAIHTPTLMMRSEVPDPYQLLGKRTFLHPTVLSG
EEEEEEECCCCCEEEEEHHHHHEEECCCCCCCEEEEECCCCCHHHHHCCCCEECCHHHCC
GVFADAINAHSGAPQSIYSDEFVWKNGADGELGYKLEVPPVHPILIASKTIGYGISHAEL
CHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCEEEEEECHHCCCCHHHHH
MAQFNQLQVTIALIRDGYHPDSQGGQVHLTSTGFALDYPLTEAFWRAARRAYASMAELQF
HHHHHHHEEEEEEEECCCCCCCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHEE
SAGALKVLPISDGMPYLSSWKEAKESIAQMDLAPLRTVVASAHVMGGCPFGEDEKLSMVN
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
SFGQSHYLDNLSVMDGSIFPTSLGANPQLSIYGITARNATALAQKLTDGREPQ
HCCHHHCCCCCEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]