| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921825
Identifier: 117921825
GI number: 117921825
Start: 4059497
End: 4059850
Strand: Reverse
Name: 117921825
Synonym: Shewana3_3388
Alternate gene names: NA
Gene position: 4059850-4059497 (Counterclockwise)
Preceding gene: 117921826
Following gene: 117921824
Centisome position: 81.65
GC content: 50.85
Gene sequence:
>354_bases ATGAGCAGGGATGTAGAAGAGTACAAGTCATTCGTTGACGCGTTGGTTGGCATCAAAAGCGCTGCGGCGGCCCAATGGGT TACGGGTAAAGGTTTCCCGGATGTTCCGGGCAACGAGCACATCAACCAGTTCCTTGCCTCTTTAACTCCTCAGCAAAAAG AAATCTTGGCCTCAATGATCCAAGGCGCCAAGGAGTCTGGCATCCACGACACCTTGGCCTATCTCAACGAGCAAATGGTT TTCGGGCACATCGAAATCACCCAAAATGGCGTTAAGCTACCGGTTGAGCCTTTCGATACAGAGCTTCATTTTGACTGGGT AGCAAGAAGCGAGGGCGATGAATGGCCAGAGTAA
Upstream 100 bases:
>100_bases TACGTGCATATAACCATCGCCATCAAAACGCCGCTTCGCGGCTCGACTCGCAACAAGTTGCTCGCGTTTGTGGCGGGCGT TATAACCCTTAAGGAAAGTC
Downstream 100 bases:
>100_bases TGGGTTATAACAAAGCCTTCAAAATCGTTCGCTTTGCTCACTGGGACCTCCAAACTGCTGCGCAGTTTTCCGGCCCCTTA ACGCGGCGTTATGCCTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSRDVEEYKSFVDALVGIKSAAAAQWVTGKGFPDVPGNEHINQFLASLTPQQKEILASMIQGAKESGIHDTLAYLNEQMV FGHIEITQNGVKLPVEPFDTELHFDWVARSEGDEWPE
Sequences:
>Translated_117_residues MSRDVEEYKSFVDALVGIKSAAAAQWVTGKGFPDVPGNEHINQFLASLTPQQKEILASMIQGAKESGIHDTLAYLNEQMV FGHIEITQNGVKLPVEPFDTELHFDWVARSEGDEWPE >Mature_116_residues SRDVEEYKSFVDALVGIKSAAAAQWVTGKGFPDVPGNEHINQFLASLTPQQKEILASMIQGAKESGIHDTLAYLNEQMVF GHIEITQNGVKLPVEPFDTELHFDWVARSEGDEWPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13030; Mature: 12898
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDVEEYKSFVDALVGIKSAAAAQWVTGKGFPDVPGNEHINQFLASLTPQQKEILASMI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH QGAKESGIHDTLAYLNEQMVFGHIEITQNGVKLPVEPFDTELHFDWVARSEGDEWPE HCHHHCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEHEEECCCCCCCCC >Mature Secondary Structure SRDVEEYKSFVDALVGIKSAAAAQWVTGKGFPDVPGNEHINQFLASLTPQQKEILASMI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH QGAKESGIHDTLAYLNEQMVFGHIEITQNGVKLPVEPFDTELHFDWVARSEGDEWPE HCHHHCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA