| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921758
Identifier: 117921758
GI number: 117921758
Start: 3981669
End: 3982406
Strand: Direct
Name: 117921758
Synonym: Shewana3_3320
Alternate gene names: NA
Gene position: 3981669-3982406 (Clockwise)
Preceding gene: 117921757
Following gene: 117921761
Centisome position: 80.08
GC content: 51.49
Gene sequence:
>738_bases ATGTTAGTGACTCAGCAAACTCAGAATATCAACACGCCCACAGGGCCGATGCGCACTTATGTCTATCGCCCAGATGCCCC AGGGCAATTCCCCTGCATCCTGTTCTATTCTGAGATTTTTCAGCAAACCGCGCCCATCGCCCGCACCGCAACTATCCTCG CTGGCCATGGTTTTGTGGTGTTAGTGCCAGAGGTCTTCCACGAGCTAAATCCGATAGGCACAGTGCTTGCCTACGACGAT GTGGGCAAAGATAAAGGCAATGCCGATAAATTTGCCAAACCCTTAGAGCAACACGATAGCGACACCCAAGCCCTTATCGA CTTTGCTCGTCAGCAGAGTTATTGCACCGGTAAGGTTGGCAGTATGGGCGTGTGTATTGGCGGCCACTTAGCCTACCGCG CCGCACTTAATCCCGAGATTTTGGGGGCGTTTTGCCTCTATCCGACCGACATTCACTCCAATACCCTGCCCTGTGCCTAT GGCAATGACTCGCTGAGTCGCAGCGGCGATATTCAAGGGGAATTAGTGTTAGTGTTTGGCAAGCAAGATCCCCATGTATC ACCCGAAGGTCGGGTATTGATCCACCAACAATTGATGGCTAAAAACCGCAATTTCAGTTGGTTAGAGGTTAATGCTCAGC ATGCCTTTATGCGTGATGAGGGTGAGCGCTACGATCCCGCGCTGGCGCTGCAAATGTATCAACAATCCGTGGCGTTTTTT CACCGTGTATTGAGATGA
Upstream 100 bases:
>100_bases GCGGGCGAGCGCTCTGGTAACGAACTGTTTTAACTGACAGAACCATACCTGACTGCTAAAGTGAGGCTTCAACATTGAAG CCTCACAGAGGAAACTAAAT
Downstream 100 bases:
>100_bases GATAAAACGAAAGAAAAAAGCCAACTCATTAATCAATCGTAATTAATGGGTTGGCTTAGCCAAATGCTTAACTCTGAGCC TAAGCCTCTAAATCTTCACA
Product: dienelactone hydrolase
Products: NA
Alternate protein names: Dienelactone Hydrolase; Dienelactone Hydrolase Family Protein; Dienelactone Hydrolase Family; Dienelactone Hydrolase Or ; Hydrolase; Arboxymethylenebutenolidase; Carboxymethylenebutenolidase Family Protein; Threonyl-TRNA Synthetase Class IIA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MLVTQQTQNINTPTGPMRTYVYRPDAPGQFPCILFYSEIFQQTAPIARTATILAGHGFVVLVPEVFHELNPIGTVLAYDD VGKDKGNADKFAKPLEQHDSDTQALIDFARQQSYCTGKVGSMGVCIGGHLAYRAALNPEILGAFCLYPTDIHSNTLPCAY GNDSLSRSGDIQGELVLVFGKQDPHVSPEGRVLIHQQLMAKNRNFSWLEVNAQHAFMRDEGERYDPALALQMYQQSVAFF HRVLR
Sequences:
>Translated_245_residues MLVTQQTQNINTPTGPMRTYVYRPDAPGQFPCILFYSEIFQQTAPIARTATILAGHGFVVLVPEVFHELNPIGTVLAYDD VGKDKGNADKFAKPLEQHDSDTQALIDFARQQSYCTGKVGSMGVCIGGHLAYRAALNPEILGAFCLYPTDIHSNTLPCAY GNDSLSRSGDIQGELVLVFGKQDPHVSPEGRVLIHQQLMAKNRNFSWLEVNAQHAFMRDEGERYDPALALQMYQQSVAFF HRVLR >Mature_245_residues MLVTQQTQNINTPTGPMRTYVYRPDAPGQFPCILFYSEIFQQTAPIARTATILAGHGFVVLVPEVFHELNPIGTVLAYDD VGKDKGNADKFAKPLEQHDSDTQALIDFARQQSYCTGKVGSMGVCIGGHLAYRAALNPEILGAFCLYPTDIHSNTLPCAY GNDSLSRSGDIQGELVLVFGKQDPHVSPEGRVLIHQQLMAKNRNFSWLEVNAQHAFMRDEGERYDPALALQMYQQSVAFF HRVLR
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320117, Length=258, Percent_Identity=40.6976744186046, Blast_Score=173, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27246; Mature: 27246
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVTQQTQNINTPTGPMRTYVYRPDAPGQFPCILFYSEIFQQTAPIARTATILAGHGFVV CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHEEEEECCCEEE LVPEVFHELNPIGTVLAYDDVGKDKGNADKFAKPLEQHDSDTQALIDFARQQSYCTGKVG ECHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC SMGVCIGGHLAYRAALNPEILGAFCLYPTDIHSNTLPCAYGNDSLSRSGDIQGELVLVFG CEEEEECCHHEEEECCCHHHEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEC KQDPHVSPEGRVLIHQQLMAKNRNFSWLEVNAQHAFMRDEGERYDPALALQMYQQSVAFF CCCCCCCCCCCEEEEHHHHHCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHH HRVLR HHHHC >Mature Secondary Structure MLVTQQTQNINTPTGPMRTYVYRPDAPGQFPCILFYSEIFQQTAPIARTATILAGHGFVV CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHEEEEECCCEEE LVPEVFHELNPIGTVLAYDDVGKDKGNADKFAKPLEQHDSDTQALIDFARQQSYCTGKVG ECHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC SMGVCIGGHLAYRAALNPEILGAFCLYPTDIHSNTLPCAYGNDSLSRSGDIQGELVLVFG CEEEEECCHHEEEECCCHHHEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEC KQDPHVSPEGRVLIHQQLMAKNRNFSWLEVNAQHAFMRDEGERYDPALALQMYQQSVAFF CCCCCCCCCCCEEEEHHHHHCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHH HRVLR HHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA