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The map label for this gene is ohrR [H]

Identifier: 117921749

GI number: 117921749

Start: 3973671

End: 3974168

Strand: Reverse

Name: ohrR [H]

Synonym: Shewana3_3311

Alternate gene names: 117921749

Gene position: 3974168-3973671 (Counterclockwise)

Preceding gene: 117921753

Following gene: 117921748

Centisome position: 79.93

GC content: 48.39

Gene sequence:

>498_bases
ATGCCTAATTCAGAGTTATCCTCCTTGGGAAAATCGCAAGACTCTGCGGAAAATACCCAAGCAGACAATGCCTTATGTTT
AGAGAATCAGGTGTGTTTCTCTCTTTACAGCGCAGCCAATGCCATGGTGCGCGCCTATCGTCCTATGCTCGATAAGTTGG
ATTTAACCTATCCCCAATATTTAGTCATGCTGGTGTTGTGGCAGGAGCAGGGGATCAGCGTGAAGACCTTAGGGGATAAA
TTGTTCCTCGATTCGGGTACGTTGACGCCTCTGTTAAAACGTTTAGAGTCGAAGGGATTGGTGAGCCGTGGACGCAGCGA
CCAAGATGAAAGGGTTCGGGTATTGTCTCTGACAAGTGCCGGGCAGGCGCTAAAGCTTGAGGCGAGTGAGATCCCGCATC
TGATGCGCTGTAAAATCGGTGCTGAGATAGAAGATCTTAAGGCGCTAAAATCCATGTGTGACAAAGCCTTAAAGCAATTG
CACGCCAGTATCGAATAG

Upstream 100 bases:

>100_bases
TTTAAGTTGTGTGCAATTTAATTGTGATAAACTATAATTCGATTTTTACCCTGAATGCAAGTATATTGTGCGCAATATAT
TTAAGTTTTTTGGTAAGACT

Downstream 100 bases:

>100_bases
TGTGAAAGCCAATCTGTGATAGCAAGGGAGTGGAGCATGGATAAACGCAGCATCAAGGCGTCGGGATGGATAAAGCCGAT
ATGAGTTCATACGATATTGC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPNSELSSLGKSQDSAENTQADNALCLENQVCFSLYSAANAMVRAYRPMLDKLDLTYPQYLVMLVLWQEQGISVKTLGDK
LFLDSGTLTPLLKRLESKGLVSRGRSDQDERVRVLSLTSAGQALKLEASEIPHLMRCKIGAEIEDLKALKSMCDKALKQL
HASIE

Sequences:

>Translated_165_residues
MPNSELSSLGKSQDSAENTQADNALCLENQVCFSLYSAANAMVRAYRPMLDKLDLTYPQYLVMLVLWQEQGISVKTLGDK
LFLDSGTLTPLLKRLESKGLVSRGRSDQDERVRVLSLTSAGQALKLEASEIPHLMRCKIGAEIEDLKALKSMCDKALKQL
HASIE
>Mature_164_residues
PNSELSSLGKSQDSAENTQADNALCLENQVCFSLYSAANAMVRAYRPMLDKLDLTYPQYLVMLVLWQEQGISVKTLGDKL
FLDSGTLTPLLKRLESKGLVSRGRSDQDERVRVLSLTSAGQALKLEASEIPHLMRCKIGAEIEDLKALKSMCDKALKQLH
ASIE

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18259; Mature: 18128

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50995 HTH_MARR_2 ; PS00226 IF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNSELSSLGKSQDSAENTQADNALCLENQVCFSLYSAANAMVRAYRPMLDKLDLTYPQY
CCCHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LVMLVLWQEQGISVKTLGDKLFLDSGTLTPLLKRLESKGLVSRGRSDQDERVRVLSLTSA
HHHHHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHCCHHHCCCCCCCHHEEEEEECCC
GQALKLEASEIPHLMRCKIGAEIEDLKALKSMCDKALKQLHASIE
CCEEEECHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PNSELSSLGKSQDSAENTQADNALCLENQVCFSLYSAANAMVRAYRPMLDKLDLTYPQY
CCHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LVMLVLWQEQGISVKTLGDKLFLDSGTLTPLLKRLESKGLVSRGRSDQDERVRVLSLTSA
HHHHHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHCCHHHCCCCCCCHHEEEEEECCC
GQALKLEASEIPHLMRCKIGAEIEDLKALKSMCDKALKQLHASIE
CCEEEECHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]