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The map label for this gene is 117921686

Identifier: 117921686

GI number: 117921686

Start: 3891094

End: 3891543

Strand: Reverse

Name: 117921686

Synonym: Shewana3_3248

Alternate gene names: NA

Gene position: 3891543-3891094 (Counterclockwise)

Preceding gene: 117921687

Following gene: 117921683

Centisome position: 78.27

GC content: 48.67

Gene sequence:

>450_bases
ATGGATAAGATCATGCGTACTCAAGAAGTGTTATGCCCGACGGACTTTTCGGCAACTGCCGCCCACGCTCTTAAATATGC
GGTTGAAATGGCAAATCTTTATCAGGTGGATATCCGCTTGTTGCATGTCGTTAGCCCAGCACGAAGCGCCCACTTTTACG
GTGTGGCTGTGGAGACGCCTGCAACGTTAGAGCAACAGCTCGCTGAATTTGTTGAACAAAAAATGCAAAGCCTACAACTG
GAGATGCAGCAGGGATTAAAGTCAGGCCTTAGTATCAAATCTGTCATTCGCCACGGTGATGCCAGTGAGGAAATTCTCGC
CGAAGCCACCAATGTGGGCATGGTGGTCATTGCCAGCCATGGTAGCACTAGCTTAATGGACTTTTTAAAACCCCATGTGA
GTCAAGATGTGGTGCGACTCGCTAAGTGTCCGGTACTAGTCGTTAAGTAG

Upstream 100 bases:

>100_bases
CTAAAGCATAATTAATTTTACGGCCTAGCTGCTTGTCCCGATTTACTGCTATAAAATACAGATTATCAGCCCCCATTATT
GGGCGAAACAACCATAAGCG

Downstream 100 bases:

>100_bases
GATCAGAGCGGATCATGCTTTAACACTGAATGATCCAGCAGGGTATTAGCCGCCTCGGCCTCATTATCTAGGGACACTAA
ACGTCGATATTTTTCCTGTA

Product: UspA domain-containing protein

Products: NA

Alternate protein names: USP MJ0577 [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MDKIMRTQEVLCPTDFSATAAHALKYAVEMANLYQVDIRLLHVVSPARSAHFYGVAVETPATLEQQLAEFVEQKMQSLQL
EMQQGLKSGLSIKSVIRHGDASEEILAEATNVGMVVIASHGSTSLMDFLKPHVSQDVVRLAKCPVLVVK

Sequences:

>Translated_149_residues
MDKIMRTQEVLCPTDFSATAAHALKYAVEMANLYQVDIRLLHVVSPARSAHFYGVAVETPATLEQQLAEFVEQKMQSLQL
EMQQGLKSGLSIKSVIRHGDASEEILAEATNVGMVVIASHGSTSLMDFLKPHVSQDVVRLAKCPVLVVK
>Mature_149_residues
MDKIMRTQEVLCPTDFSATAAHALKYAVEMANLYQVDIRLLHVVSPARSAHFYGVAVETPATLEQQLAEFVEQKMQSLQL
EMQQGLKSGLSIKSVIRHGDASEEILAEATNVGMVVIASHGSTSLMDFLKPHVSQDVVRLAKCPVLVVK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16333; Mature: 16333

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIMRTQEVLCPTDFSATAAHALKYAVEMANLYQVDIRLLHVVSPARSAHFYGVAVETP
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
ATLEQQLAEFVEQKMQSLQLEMQQGLKSGLSIKSVIRHGDASEEILAEATNVGMVVIASH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCEEEEECC
GSTSLMDFLKPHVSQDVVRLAKCPVLVVK
CCHHHHHHHHHHHHHHHHHHHHCCEEEEC
>Mature Secondary Structure
MDKIMRTQEVLCPTDFSATAAHALKYAVEMANLYQVDIRLLHVVSPARSAHFYGVAVETP
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
ATLEQQLAEFVEQKMQSLQLEMQQGLKSGLSIKSVIRHGDASEEILAEATNVGMVVIASH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCEEEEECC
GSTSLMDFLKPHVSQDVVRLAKCPVLVVK
CCHHHHHHHHHHHHHHHHHHHHCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9860944 [H]