BacMap

Definition	Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession	NC_008577
Length	4,972,204

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The map label for this gene is hflB [C]

Identifier: 117921634

GI number: 117921634

Start: 3833991

End: 3835550

Strand: Reverse

Name: hflB [C]

Synonym: Shewana3_3196

Alternate gene names: 117921634

Gene position: 3835550-3833991 (Counterclockwise)

Preceding gene: 117921639

Following gene: 117921633

Centisome position: 77.14

GC content: 49.87

Gene sequence:

>1560_bases
GTGGTAAAAATCCTGTTTGTGGCGGTGTTTTATGTTAACTTTTCGTTTCATAACGGATTATGGAAAACTAAGATGCAAGA
CATTCGCGATTTAACCGCTGTACTACGTTCTAAAACGCCCATCGTAGTGATTGAAACCTATGAGGAATACCGTGTTGTAG
ACATGCTTAAGCGGGTGGCGAATGTGCTCTATCAGCCCTTATTTACCTGGAGCATTACCCAAGGGCTGACGCGGGTCGAT
AAACCCATGGCGGCGCAGAAATTTAATACTGAACCTGGCGATATCCTAGGGCAGATTAAATCGACGACCCAGCAGGGCAT
CTATGTGCTCTGTGATTTTCACCCCTTTGTGGTTGATGCGCCAAAGAATGTCCGTTTGCTTAAAGAAATCGCCCTCGAAT
ACGATGCGCTGCAACATACGTTGGTGCTGGTGAGCCATGCCTTTGAGATCCCGCCCGAAATTAAGCGCTATTGCGCCTAT
TTTCAGCTCACCCTGCCGAGTACCTCCCAGCTTGAGAACTTGATTTACCTTGAAGTGGATAAAGTGCGCGGCGAAGGCAT
GCCGCTCACTGTGGATGATAAAGCCGTGGGTAAACTGGCGGAAAACCTGCGCGGTGTGACCTTAGATGATGCCAGACGGT
TGATCCACAAAGCCATTGTGGATGATGGCGCCATTACCCATTCGGATGTGGACCTTATCAACAAAGCTAAATTCCAATTA
CTCGATCTCAACGGTGTGCTGCAATTTGAGTACGACACCAGTGATTTTTCGCAGATTGCTGGATTACATAATCTCAAGAA
ATGGTTAAAGCAGCGCGCGCCAGCGACGCAGGCAACCACAGATGACAAGGCTACGGTACAACCCGATGCGCCAAAAGGCG
TGTTATTACTCGGAGTGCAGGGCAGCGGTAAGAGCCTTGCGGCCAAAGCAGTCGCGGGCGTATGGCAACGACCCTTGCTC
AGACTCGATATGGGCGCCCTATATAACAAATACATAGGCGAAACTGAAAAGAACTTGCGTAACGCCCTCGAGCTGGCCGA
TATGATGTCGCCCTGTATCCTTTGGATTGATGAGATAGAGAAAGGCTTAAGCGGCAGTAGCAGTGATGAGGGCACTTCGA
CCCGCATTTTGGGCACACTATTAACTTGGATGGCGGAGCGTAAGTCCGAGGTATTTGTAGTCGCCACCGCTAACGATATT
CAAGTCCTGCCTCCAGAGCTGATGCGTAAGGGGCGAATGGATGAAATCTTCTTTGTCGATTTACCCGACGAGGCAATTCG
TCAGGCGATTTTCTTAATCCATTGCCAGCGCCGTGGTATTGATGTGACTCGGCTCGACCTTGCGCAGCTTTCGCGCCATA
GCCAAGGGTTTTCGGGAGCTGAAATCGAGCAAGCCGTTATCGCCGCCATGTACAGCGCCCGCAGTTTAGCGCGCAGTCTT
GACCAAGACATGTTGTTAGAAGAACTGACCAAAACCAAACCTTTATCCATAGTGATGGGCGATAAGATTAATGCCCTAAG
ACAATGGGCCGCAGGACGCACAGTCAATGCCCATGAGTAG

Upstream 100 bases:

>100_bases
TTCTTGGGCCATAGTCTACCCCGATTGGCGCTAAAGCATGAGACTGAAATTAACAACTGTGTTTTCGATCAAGCTATTTA
AGAGCGATTAGTGCTTGGGC

Downstream 100 bases:

>100_bases
CAACTTAACCCACTATCACTGATTGTGTTATGGCTGCGTATGGGGCCGAGCCTTATTCGCCATAAAACGACTTTAAATTT
CAGTAGTGGCTTTTGGTTGG

Product: ATPase central domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MVKILFVAVFYVNFSFHNGLWKTKMQDIRDLTAVLRSKTPIVVIETYEEYRVVDMLKRVANVLYQPLFTWSITQGLTRVD
KPMAAQKFNTEPGDILGQIKSTTQQGIYVLCDFHPFVVDAPKNVRLLKEIALEYDALQHTLVLVSHAFEIPPEIKRYCAY
FQLTLPSTSQLENLIYLEVDKVRGEGMPLTVDDKAVGKLAENLRGVTLDDARRLIHKAIVDDGAITHSDVDLINKAKFQL
LDLNGVLQFEYDTSDFSQIAGLHNLKKWLKQRAPATQATTDDKATVQPDAPKGVLLLGVQGSGKSLAAKAVAGVWQRPLL
RLDMGALYNKYIGETEKNLRNALELADMMSPCILWIDEIEKGLSGSSSDEGTSTRILGTLLTWMAERKSEVFVVATANDI
QVLPPELMRKGRMDEIFFVDLPDEAIRQAIFLIHCQRRGIDVTRLDLAQLSRHSQGFSGAEIEQAVIAAMYSARSLARSL
DQDMLLEELTKTKPLSIVMGDKINALRQWAAGRTVNAHE

Sequences:

>Translated_519_residues
MVKILFVAVFYVNFSFHNGLWKTKMQDIRDLTAVLRSKTPIVVIETYEEYRVVDMLKRVANVLYQPLFTWSITQGLTRVD
KPMAAQKFNTEPGDILGQIKSTTQQGIYVLCDFHPFVVDAPKNVRLLKEIALEYDALQHTLVLVSHAFEIPPEIKRYCAY
FQLTLPSTSQLENLIYLEVDKVRGEGMPLTVDDKAVGKLAENLRGVTLDDARRLIHKAIVDDGAITHSDVDLINKAKFQL
LDLNGVLQFEYDTSDFSQIAGLHNLKKWLKQRAPATQATTDDKATVQPDAPKGVLLLGVQGSGKSLAAKAVAGVWQRPLL
RLDMGALYNKYIGETEKNLRNALELADMMSPCILWIDEIEKGLSGSSSDEGTSTRILGTLLTWMAERKSEVFVVATANDI
QVLPPELMRKGRMDEIFFVDLPDEAIRQAIFLIHCQRRGIDVTRLDLAQLSRHSQGFSGAEIEQAVIAAMYSARSLARSL
DQDMLLEELTKTKPLSIVMGDKINALRQWAAGRTVNAHE
>Mature_519_residues
MVKILFVAVFYVNFSFHNGLWKTKMQDIRDLTAVLRSKTPIVVIETYEEYRVVDMLKRVANVLYQPLFTWSITQGLTRVD
KPMAAQKFNTEPGDILGQIKSTTQQGIYVLCDFHPFVVDAPKNVRLLKEIALEYDALQHTLVLVSHAFEIPPEIKRYCAY
FQLTLPSTSQLENLIYLEVDKVRGEGMPLTVDDKAVGKLAENLRGVTLDDARRLIHKAIVDDGAITHSDVDLINKAKFQL
LDLNGVLQFEYDTSDFSQIAGLHNLKKWLKQRAPATQATTDDKATVQPDAPKGVLLLGVQGSGKSLAAKAVAGVWQRPLL
RLDMGALYNKYIGETEKNLRNALELADMMSPCILWIDEIEKGLSGSSSDEGTSTRILGTLLTWMAERKSEVFVVATANDI
QVLPPELMRKGRMDEIFFVDLPDEAIRQAIFLIHCQRRGIDVTRLDLAQLSRHSQGFSGAEIEQAVIAAMYSARSLARSL
DQDMLLEELTKTKPLSIVMGDKINALRQWAAGRTVNAHE

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI157671927, Length=264, Percent_Identity=32.5757575757576, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI195539395, Length=246, Percent_Identity=30.8943089430894, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI24430151, Length=224, Percent_Identity=33.0357142857143, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI6005942, Length=214, Percent_Identity=29.4392523364486, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI45643123, Length=145, Percent_Identity=37.9310344827586, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI45643125, Length=145, Percent_Identity=37.9310344827586, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI21361144, Length=291, Percent_Identity=27.1477663230241, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI300192933, Length=205, Percent_Identity=32.1951219512195, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI24497618, Length=231, Percent_Identity=32.034632034632, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI153792536, Length=229, Percent_Identity=31.4410480349345, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI4506209, Length=212, Percent_Identity=31.1320754716981, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI24497435, Length=192, Percent_Identity=32.8125, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI7019569, Length=245, Percent_Identity=28.1632653061224, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI4507173, Length=231, Percent_Identity=32.034632034632, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI11875211, Length=204, Percent_Identity=29.9019607843137, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI40806170, Length=204, Percent_Identity=29.9019607843137, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI17865802, Length=225, Percent_Identity=28.8888888888889, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI31377644, Length=204, Percent_Identity=29.9019607843137, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI226371754, Length=206, Percent_Identity=31.5533980582524, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI89064750, Length=180, Percent_Identity=31.1111111111111, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI24430155, Length=180, Percent_Identity=31.1111111111111, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI5729991, Length=180, Percent_Identity=31.1111111111111, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI21327685, Length=232, Percent_Identity=28.448275862069, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI7657689, Length=232, Percent_Identity=28.448275862069, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI5901990, Length=181, Percent_Identity=30.939226519337, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI4505725, Length=222, Percent_Identity=26.5765765765766, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI229577436, Length=271, Percent_Identity=28.0442804428044, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI31742536, Length=179, Percent_Identity=27.9329608938547, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI112789543, Length=179, Percent_Identity=27.9329608938547, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI194018488, Length=129, Percent_Identity=35.6589147286822, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI156564401, Length=233, Percent_Identity=27.8969957081545, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI310125282, Length=233, Percent_Identity=27.8969957081545, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI310125280, Length=233, Percent_Identity=27.8969957081545, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI14149767, Length=295, Percent_Identity=25.4237288135593, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI62177112, Length=295, Percent_Identity=25.4237288135593, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1789568, Length=197, Percent_Identity=35.0253807106599, Blast_Score=101, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17532375, Length=244, Percent_Identity=31.9672131147541, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17531535, Length=248, Percent_Identity=29.0322580645161, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17508053, Length=283, Percent_Identity=30.3886925795053, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71994521, Length=242, Percent_Identity=30.9917355371901, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI71987364, Length=233, Percent_Identity=30.9012875536481, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI71987372, Length=233, Percent_Identity=30.9012875536481, Blast_Score=96, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17563250, Length=222, Percent_Identity=30.6306306306306, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17554786, Length=194, Percent_Identity=33.5051546391753, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17508701, Length=299, Percent_Identity=26.7558528428094, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17537217, Length=216, Percent_Identity=32.4074074074074, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17505546, Length=345, Percent_Identity=28.1159420289855, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17563248, Length=212, Percent_Identity=31.1320754716981, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17554264, Length=187, Percent_Identity=33.1550802139037, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25144281, Length=195, Percent_Identity=32.3076923076923, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25144278, Length=195, Percent_Identity=32.3076923076923, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI133931034, Length=330, Percent_Identity=26.969696969697, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193206114, Length=330, Percent_Identity=26.969696969697, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193206116, Length=330, Percent_Identity=26.969696969697, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI25153574, Length=228, Percent_Identity=28.0701754385965, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17562804, Length=181, Percent_Identity=32.0441988950276, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193209502, Length=195, Percent_Identity=29.7435897435897, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI86561515, Length=229, Percent_Identity=28.3842794759825, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17554784, Length=215, Percent_Identity=29.7674418604651, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI25146157, Length=259, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17541224, Length=245, Percent_Identity=26.530612244898, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17541226, Length=245, Percent_Identity=26.530612244898, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI133901658, Length=203, Percent_Identity=31.0344827586207, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI133901662, Length=203, Percent_Identity=31.0344827586207, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI115534323, Length=271, Percent_Identity=26.9372693726937, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI32563584, Length=179, Percent_Identity=30.7262569832402, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17508421, Length=179, Percent_Identity=30.7262569832402, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6320077, Length=212, Percent_Identity=32.5471698113208, Blast_Score=101, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6324833, Length=253, Percent_Identity=30.8300395256917, Blast_Score=101, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6324691, Length=331, Percent_Identity=27.4924471299094, Blast_Score=97, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6322994, Length=239, Percent_Identity=28.8702928870293, Blast_Score=95, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6323429, Length=233, Percent_Identity=29.6137339055794, Blast_Score=94, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6320197, Length=225, Percent_Identity=29.7777777777778, Blast_Score=94, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6320854, Length=200, Percent_Identity=34, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6322704, Length=232, Percent_Identity=30.1724137931034, Blast_Score=91, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6324000, Length=202, Percent_Identity=31.1881188118812, Blast_Score=90, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6321390, Length=192, Percent_Identity=31.25, Blast_Score=88, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6320602, Length=224, Percent_Identity=30.3571428571429, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6321709, Length=255, Percent_Identity=30.1960784313725, Blast_Score=85, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6322651, Length=182, Percent_Identity=30.2197802197802, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6325281, Length=234, Percent_Identity=30.3418803418803, Blast_Score=82, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6321465, Length=187, Percent_Identity=28.8770053475936, Blast_Score=81, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6325183, Length=253, Percent_Identity=29.2490118577075, Blast_Score=77, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6323736, Length=196, Percent_Identity=31.6326530612245, Blast_Score=77, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6320887, Length=237, Percent_Identity=28.6919831223629, Blast_Score=71, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6325431, Length=183, Percent_Identity=30.6010928961749, Blast_Score=70, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6319554, Length=195, Percent_Identity=28.7179487179487, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17137560, Length=259, Percent_Identity=28.957528957529, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI161076486, Length=259, Percent_Identity=28.957528957529, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI161076488, Length=259, Percent_Identity=28.957528957529, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24660075, Length=204, Percent_Identity=31.3725490196078, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI281365776, Length=204, Percent_Identity=31.3725490196078, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI45552965, Length=204, Percent_Identity=31.3725490196078, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24652279, Length=221, Percent_Identity=29.8642533936652, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI17738151, Length=301, Percent_Identity=27.906976744186, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24649446, Length=222, Percent_Identity=31.5315315315315, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24639391, Length=258, Percent_Identity=31.3953488372093, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24665814, Length=203, Percent_Identity=33.9901477832512, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28574878, Length=203, Percent_Identity=33.9901477832512, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI20129529, Length=195, Percent_Identity=34.3589743589744, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17137738, Length=212, Percent_Identity=31.1320754716981, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI20129423, Length=198, Percent_Identity=33.8383838383838, Blast_Score=93, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24663015, Length=245, Percent_Identity=28.9795918367347, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI19920408, Length=192, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24640100, Length=311, Percent_Identity=27.6527331189711, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281363136, Length=201, Percent_Identity=30.8457711442786, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI78707192, Length=201, Percent_Identity=30.8457711442786, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21355121, Length=233, Percent_Identity=29.1845493562232, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24581396, Length=226, Percent_Identity=30.9734513274336, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI18859657, Length=184, Percent_Identity=32.6086956521739, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24651451, Length=194, Percent_Identity=33.5051546391753, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24656820, Length=221, Percent_Identity=28.5067873303167, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24656825, Length=221, Percent_Identity=28.5067873303167, Blast_Score=85, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281361487, Length=184, Percent_Identity=31.5217391304348, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24644145, Length=228, Percent_Identity=31.140350877193, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI19921202, Length=247, Percent_Identity=27.9352226720648, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI18860063, Length=194, Percent_Identity=30.4123711340206, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24658770, Length=187, Percent_Identity=30.4812834224599, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI281360136, Length=205, Percent_Identity=30.2439024390244, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24644411, Length=205, Percent_Identity=30.2439024390244, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281360144, Length=205, Percent_Identity=31.219512195122, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281360140, Length=205, Percent_Identity=31.219512195122, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281360146, Length=205, Percent_Identity=31.219512195122, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281360142, Length=205, Percent_Identity=30.2439024390244, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281360138, Length=205, Percent_Identity=31.219512195122, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21357333, Length=205, Percent_Identity=30.2439024390244, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28571849, Length=179, Percent_Identity=31.8435754189944, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI28571847, Length=179, Percent_Identity=31.8435754189944, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI28573010, Length=199, Percent_Identity=28.1407035175879, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17864540, Length=202, Percent_Identity=29.2079207920792, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR001984
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 58158; Mature: 58158

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKILFVAVFYVNFSFHNGLWKTKMQDIRDLTAVLRSKTPIVVIETYEEYRVVDMLKRVA
CHHHHEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
NVLYQPLFTWSITQGLTRVDKPMAAQKFNTEPGDILGQIKSTTQQGIYVLCDFHPFVVDA
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEEC
PKNVRLLKEIALEYDALQHTLVLVSHAFEIPPEIKRYCAYFQLTLPSTSQLENLIYLEVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCHHHHCCEEEEEEE
KVRGEGMPLTVDDKAVGKLAENLRGVTLDDARRLIHKAIVDDGAITHSDVDLINKAKFQL
ECCCCCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEE
LDLNGVLQFEYDTSDFSQIAGLHNLKKWLKQRAPATQATTDDKATVQPDAPKGVLLLGVQ
EECCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEEEEC
GSGKSLAAKAVAGVWQRPLLRLDMGALYNKYIGETEKNLRNALELADMMSPCILWIDEIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLSGSSSDEGTSTRILGTLLTWMAERKSEVFVVATANDIQVLPPELMRKGRMDEIFFVD
HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCHHHHCCCCCCCEEEEE
LPDEAIRQAIFLIHCQRRGIDVTRLDLAQLSRHSQGFSGAEIEQAVIAAMYSARSLARSL
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
DQDMLLEELTKTKPLSIVMGDKINALRQWAAGRTVNAHE
CHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVKILFVAVFYVNFSFHNGLWKTKMQDIRDLTAVLRSKTPIVVIETYEEYRVVDMLKRVA
CHHHHEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
NVLYQPLFTWSITQGLTRVDKPMAAQKFNTEPGDILGQIKSTTQQGIYVLCDFHPFVVDA
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEEC
PKNVRLLKEIALEYDALQHTLVLVSHAFEIPPEIKRYCAYFQLTLPSTSQLENLIYLEVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCHHHHCCEEEEEEE
KVRGEGMPLTVDDKAVGKLAENLRGVTLDDARRLIHKAIVDDGAITHSDVDLINKAKFQL
ECCCCCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEE
LDLNGVLQFEYDTSDFSQIAGLHNLKKWLKQRAPATQATTDDKATVQPDAPKGVLLLGVQ
EECCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEEEEC
GSGKSLAAKAVAGVWQRPLLRLDMGALYNKYIGETEKNLRNALELADMMSPCILWIDEIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLSGSSSDEGTSTRILGTLLTWMAERKSEVFVVATANDIQVLPPELMRKGRMDEIFFVD
HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCHHHHCCCCCCCEEEEE
LPDEAIRQAIFLIHCQRRGIDVTRLDLAQLSRHSQGFSGAEIEQAVIAAMYSARSLARSL
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
DQDMLLEELTKTKPLSIVMGDKINALRQWAAGRTVNAHE
CHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]