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The map label for this gene is mipA [H]

Identifier: 117921620

GI number: 117921620

Start: 3821466

End: 3822380

Strand: Direct

Name: mipA [H]

Synonym: Shewana3_3182

Alternate gene names: 117921620

Gene position: 3821466-3822380 (Clockwise)

Preceding gene: 117921619

Following gene: 117921621

Centisome position: 76.86

GC content: 44.92

Gene sequence:

>915_bases
ATGCTAATCTGTTGCCTATTATCGACAGACATTAAACCCGAACGCAAAATCATGTATCGAATTCTATTTATCTTACTCGC
CGCACTTAGCCTACCTTCAATAGGAATGGCGAAAGAACCGTGCGTCACTAAAGATGAATGTATTGAAATGCGTAACTGGG
ATTTAGGGGTAGCGATCGGCTGGGGACAGAAGACCAATCCATTGCGAGATTTTGATGATATCCCAGTCTTCTTTATTCCC
ACCGTAGCTTACTATGGTGAGCATTGGTTTTTTGATAATGGCAACTTGGGCTACAGTTTAACCGAGCAGAAGTACTTCAG
CTTAAACTTAGTCACCAGTTATAGCTTAGATAGGGCCTACTTTTACCGTTGGGATCCGTCCAATATCTTCCTAAAACGCA
GTTCACAGGAAGAGGCCAGACTGCTCTCAACCAATACCGCCCTGAGCAGTGAGCCGGACCCCGTATTTAACTCCTTAGAA
TCGCGCAACTTTACCATGCTCGGCGGCGCCGAAGCCTTTATTTATAGCCCGTTAGGTGTAGTGAGATTGGCCTATACCCA
TGATATGTTTAATGTGCACCAAGGGTCTGAAGCGCAAATCAAATGGACCTATGGCTGGCATTTAACGCGCTGGTTGATGG
ATATGTCACTCGTATTCGATTGGAAGAGTACGAATGTGGTCGACTATTACTATGGTGTTCGCCCGAGTGAAAATGATTAT
TGGAGCCAACATTACCATGCCGATGCAGGTTGGAATAAAGGAATAGAAATGACAGCCCGTTATATCTTAACTGATAACTG
GGATATGCTGTTTGCGTTCCGCTACACACAACTTGCAGACGAAATTGCCGCCAGCCCCTTGCTCGATCAAGACTATAGCA
GCACATATTTTATTGGCGCAACGTATAGGTTCTGA

Upstream 100 bases:

>100_bases
GTCTTTCAAGTGATTGCGTAATCTACATATCAGCTATTTATATGATATCTGTATCATTTTGCATCCCTAAAGGTGAAAGC
ACTGTGGAATTAAGCATAAA

Downstream 100 bases:

>100_bases
CACTAGTGACTCCTCTTCATATCAGGATGCTGTGCGTGTTAGGCCTAAGCGTTAGCTTGATGGGGCCCAGTTATGCACTT
GCAGCATCAGATGAAGAGTC

Product: MltA-interacting MipA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MLICCLLSTDIKPERKIMYRILFILLAALSLPSIGMAKEPCVTKDECIEMRNWDLGVAIGWGQKTNPLRDFDDIPVFFIP
TVAYYGEHWFFDNGNLGYSLTEQKYFSLNLVTSYSLDRAYFYRWDPSNIFLKRSSQEEARLLSTNTALSSEPDPVFNSLE
SRNFTMLGGAEAFIYSPLGVVRLAYTHDMFNVHQGSEAQIKWTYGWHLTRWLMDMSLVFDWKSTNVVDYYYGVRPSENDY
WSQHYHADAGWNKGIEMTARYILTDNWDMLFAFRYTQLADEIAASPLLDQDYSSTYFIGATYRF

Sequences:

>Translated_304_residues
MLICCLLSTDIKPERKIMYRILFILLAALSLPSIGMAKEPCVTKDECIEMRNWDLGVAIGWGQKTNPLRDFDDIPVFFIP
TVAYYGEHWFFDNGNLGYSLTEQKYFSLNLVTSYSLDRAYFYRWDPSNIFLKRSSQEEARLLSTNTALSSEPDPVFNSLE
SRNFTMLGGAEAFIYSPLGVVRLAYTHDMFNVHQGSEAQIKWTYGWHLTRWLMDMSLVFDWKSTNVVDYYYGVRPSENDY
WSQHYHADAGWNKGIEMTARYILTDNWDMLFAFRYTQLADEIAASPLLDQDYSSTYFIGATYRF
>Mature_304_residues
MLICCLLSTDIKPERKIMYRILFILLAALSLPSIGMAKEPCVTKDECIEMRNWDLGVAIGWGQKTNPLRDFDDIPVFFIP
TVAYYGEHWFFDNGNLGYSLTEQKYFSLNLVTSYSLDRAYFYRWDPSNIFLKRSSQEEARLLSTNTALSSEPDPVFNSLE
SRNFTMLGGAEAFIYSPLGVVRLAYTHDMFNVHQGSEAQIKWTYGWHLTRWLMDMSLVFDWKSTNVVDYYYGVRPSENDY
WSQHYHADAGWNKGIEMTARYILTDNWDMLFAFRYTQLADEIAASPLLDQDYSSTYFIGATYRF

Specific function: May serve as a scaffold protein required for the formation of a complex with mrcB/ponB and mltA, this complex could play a role in enlargement and septation of the murein sacculus [H]

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

Organism=Escherichia coli, GI1788082, Length=288, Percent_Identity=23.2638888888889, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1790010, Length=252, Percent_Identity=21.031746031746, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 35420; Mature: 35420

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLICCLLSTDIKPERKIMYRILFILLAALSLPSIGMAKEPCVTKDECIEMRNWDLGVAIG
CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEE
WGQKTNPLRDFDDIPVFFIPTVAYYGEHWFFDNGNLGYSLTEQKYFSLNLVTSYSLDRAY
CCCCCCCCCCCCCCCEEEECHHHHCCCEEEEECCCCCEEECCCEEEEEEEEEEECCCCEE
FYRWDPSNIFLKRSSQEEARLLSTNTALSSEPDPVFNSLESRNFTMLGGAEAFIYSPLGV
EEEECCCCEEEEECCCHHHHEEECCCCCCCCCCHHHHHHCCCCEEEECCCCEEEECCHHH
VRLAYTHDMFNVHQGSEAQIKWTYGWHLTRWLMDMSLVFDWKSTNVVDYYYGVRPSENDY
EEEEEECCHHCCCCCCCCEEEEEECHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCC
WSQHYHADAGWNKGIEMTARYILTDNWDMLFAFRYTQLADEIAASPLLDQDYSSTYFIGA
HHHCEECCCCCCCCCEEEEEEEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEE
TYRF
EECC
>Mature Secondary Structure
MLICCLLSTDIKPERKIMYRILFILLAALSLPSIGMAKEPCVTKDECIEMRNWDLGVAIG
CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEE
WGQKTNPLRDFDDIPVFFIPTVAYYGEHWFFDNGNLGYSLTEQKYFSLNLVTSYSLDRAY
CCCCCCCCCCCCCCCEEEECHHHHCCCEEEEECCCCCEEECCCEEEEEEEEEEECCCCEE
FYRWDPSNIFLKRSSQEEARLLSTNTALSSEPDPVFNSLESRNFTMLGGAEAFIYSPLGV
EEEECCCCEEEEECCCHHHHEEECCCCCCCCCCHHHHHHCCCCEEEECCCCEEEECCHHH
VRLAYTHDMFNVHQGSEAQIKWTYGWHLTRWLMDMSLVFDWKSTNVVDYYYGVRPSENDY
EEEEEECCHHCCCCCCCCEEEEEECHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCC
WSQHYHADAGWNKGIEMTARYILTDNWDMLFAFRYTQLADEIAASPLLDQDYSSTYFIGA
HHHCEECCCCCCCCCEEEEEEEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEE
TYRF
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10037771; 10806384 [H]