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The map label for this gene is yfbK [H]

Identifier: 117921591

GI number: 117921591

Start: 3780541

End: 3782382

Strand: Reverse

Name: yfbK [H]

Synonym: Shewana3_3153

Alternate gene names: 117921591

Gene position: 3782382-3780541 (Counterclockwise)

Preceding gene: 117921596

Following gene: 117921590

Centisome position: 76.07

GC content: 50.22

Gene sequence:

>1842_bases
ATGAGATATCCATCTTCAGTCTTTCGCCATAAAGCGCATTTAAGTTTTGTTGTTTCGGGATTAACGCTCGCTATTTTGCT
CGGTTTGAGTGCTTGCAGTGATAAAGCCGCCGAGCAGCAAACCCCTGCTGAATTAGCCGCTCAAGCAAAACTCGCCGCCG
AGCAACAGGCCGAGCGTCAGGCCAATAGGCAAAGAGATGCCGCAATCGCCATGCATGAACAAGCCTCGTCAGCAAAACTG
CGGACAATGAGTGCTGAGAGTCGAGCCTATATTGCGCAACCTACTGCCAGTATCAGTGCTGCGCCCGCGTTAAACGGCGA
TTGGCCGGGGGCTGTGCCACCCGAGCGCAATCGCTTCGAGAAGCAAGTGCAAAACGGCATCATGGTTGCGGGGGAAATCC
CGGTCTCCACCTTTGCTATCGATGTCGATACTGGTAGTTACACGACCTTAAGGCGAATGTTAAAGGAAGGGCGGTTACCA
CAGAAGGACACGCTGCGGGTTGAGGAAATGCTGAATTATTTTTCCTATGACTATCCACTGCCGGGGAAAAATGACGCGCC
CTTTAGTGTTACGACCGAGCTTGCACCATCGCCCTATAACGATGACATGATGTTACTTCGCATCGGTTTGAAGGGATATG
AGCAGAGTAAGGCTGAACTGGGCGCCAGTAACTTAGTGTTTCTGCTGGATGTGTCAGGGTCGATGGCATCGCCCGATAAG
TTACCTTTGCTGCAAACTGCCTTGAAAATGCTGACCCAGCAATTGGATGCTCAGGATAAGGTATCGATTGTCGTCTACGC
CGGCGCCGCTGGTGTAGTGTTAGATGGTGCAGCTGGTAACGATACTCAAACCCTTAACTATGCGTTAGAGCAGCTTAGTG
CCGGCGGTTCAACCAATGGGGCGCAGGGGATTCAGCTTGCCTATCAGTTAGCGCAGAAACACTTTGTTGAAGGCGGCATC
AATCGAGTCATTCTCGCGACCGACGGTGACTTTAATGTCGGCACGACCAACCTCGATGAGTTAATCGATTTGGTTAGCGC
GCGGAAACAACAGGGCATAGGGCTCACGACACTCGGCTTTGGCATGGGCGACTACAATGACCATCTGATGGAGCAATTGG
CCGATAAGGGCAATGGGCAATATGCCTATATTGATTCTATCAATGAGGCGAGAAAAGTGCTGGTGGAACACTTAAGTGCA
ACCTTACTCACCATAGCAAAAGAGGTGAAAGTGCAGGTCGAGTTTAATCCCGCTCTTGTGGCCGAGTATCGCTTGATTGG
CTATGAGAACCGAGCGCTCGCGCGTGAAGATTTTAATAATGACAAGGTGGACGCGGGCGAAATTGGCGCAGGGCATACAG
TCACGGCGCTTTACGAGCTGCGTTATGTTGATGCGGGGAATTTGGCCAATGATAAACTTCGCTATGGCTATAATCCCAAA
ACGGGCAATGAAAAATATAGCCGCGACGAAATCGCCTTTCTGAAATTACGTTATCAGCTACCGGATGCGACTCAAAGCCA
GCTACTGAGTTATCCGATTCGAGCAGACCAAAGGGTAAAATCATTAGCGCAGGCGAGTGATGATTTTCGTTTTGCCGCTG
CAGTGGCTGGTTTAGGACAGTTGCTGAATCAAAGCCACTATTTGCATCAATTTGATTATAATAAGCTTAGTGCGCTCACA
CGTTCTGCGCTGGGGGAAGATACCAGCGGCTACCGACATGAATTTATGCAACTTGTCGATACCGCTGCGGCACTCGCACA
AACACAGCGAGCACCAATCAAAAAATCCTTTGATGTCGGAGATAAACCTTTCCCGCCCGAGGACAAACTGCATCAGCAAT
GA

Upstream 100 bases:

>100_bases
AAGCGGATGTGACAATTTCTCTCATCAAATAACCCTTTTGTGCCGAGGCTGCGTTTATAGGGATATCCACCATTGAGAAC
ACTTTGATTAGGTCACTATC

Downstream 100 bases:

>100_bases
GCCAGATAATTATTTTTCAGTTAGTTAACCATTAGGGAGCTGCCATGGCCCTGGCGATACCGCAAATGCATGCCCATGAG
CATACCGATGAACAGTTAAT

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 613; Mature: 613

Protein sequence:

>613_residues
MRYPSSVFRHKAHLSFVVSGLTLAILLGLSACSDKAAEQQTPAELAAQAKLAAEQQAERQANRQRDAAIAMHEQASSAKL
RTMSAESRAYIAQPTASISAAPALNGDWPGAVPPERNRFEKQVQNGIMVAGEIPVSTFAIDVDTGSYTTLRRMLKEGRLP
QKDTLRVEEMLNYFSYDYPLPGKNDAPFSVTTELAPSPYNDDMMLLRIGLKGYEQSKAELGASNLVFLLDVSGSMASPDK
LPLLQTALKMLTQQLDAQDKVSIVVYAGAAGVVLDGAAGNDTQTLNYALEQLSAGGSTNGAQGIQLAYQLAQKHFVEGGI
NRVILATDGDFNVGTTNLDELIDLVSARKQQGIGLTTLGFGMGDYNDHLMEQLADKGNGQYAYIDSINEARKVLVEHLSA
TLLTIAKEVKVQVEFNPALVAEYRLIGYENRALAREDFNNDKVDAGEIGAGHTVTALYELRYVDAGNLANDKLRYGYNPK
TGNEKYSRDEIAFLKLRYQLPDATQSQLLSYPIRADQRVKSLAQASDDFRFAAAVAGLGQLLNQSHYLHQFDYNKLSALT
RSALGEDTSGYRHEFMQLVDTAAALAQTQRAPIKKSFDVGDKPFPPEDKLHQQ

Sequences:

>Translated_613_residues
MRYPSSVFRHKAHLSFVVSGLTLAILLGLSACSDKAAEQQTPAELAAQAKLAAEQQAERQANRQRDAAIAMHEQASSAKL
RTMSAESRAYIAQPTASISAAPALNGDWPGAVPPERNRFEKQVQNGIMVAGEIPVSTFAIDVDTGSYTTLRRMLKEGRLP
QKDTLRVEEMLNYFSYDYPLPGKNDAPFSVTTELAPSPYNDDMMLLRIGLKGYEQSKAELGASNLVFLLDVSGSMASPDK
LPLLQTALKMLTQQLDAQDKVSIVVYAGAAGVVLDGAAGNDTQTLNYALEQLSAGGSTNGAQGIQLAYQLAQKHFVEGGI
NRVILATDGDFNVGTTNLDELIDLVSARKQQGIGLTTLGFGMGDYNDHLMEQLADKGNGQYAYIDSINEARKVLVEHLSA
TLLTIAKEVKVQVEFNPALVAEYRLIGYENRALAREDFNNDKVDAGEIGAGHTVTALYELRYVDAGNLANDKLRYGYNPK
TGNEKYSRDEIAFLKLRYQLPDATQSQLLSYPIRADQRVKSLAQASDDFRFAAAVAGLGQLLNQSHYLHQFDYNKLSALT
RSALGEDTSGYRHEFMQLVDTAAALAQTQRAPIKKSFDVGDKPFPPEDKLHQQ
>Mature_613_residues
MRYPSSVFRHKAHLSFVVSGLTLAILLGLSACSDKAAEQQTPAELAAQAKLAAEQQAERQANRQRDAAIAMHEQASSAKL
RTMSAESRAYIAQPTASISAAPALNGDWPGAVPPERNRFEKQVQNGIMVAGEIPVSTFAIDVDTGSYTTLRRMLKEGRLP
QKDTLRVEEMLNYFSYDYPLPGKNDAPFSVTTELAPSPYNDDMMLLRIGLKGYEQSKAELGASNLVFLLDVSGSMASPDK
LPLLQTALKMLTQQLDAQDKVSIVVYAGAAGVVLDGAAGNDTQTLNYALEQLSAGGSTNGAQGIQLAYQLAQKHFVEGGI
NRVILATDGDFNVGTTNLDELIDLVSARKQQGIGLTTLGFGMGDYNDHLMEQLADKGNGQYAYIDSINEARKVLVEHLSA
TLLTIAKEVKVQVEFNPALVAEYRLIGYENRALAREDFNNDKVDAGEIGAGHTVTALYELRYVDAGNLANDKLRYGYNPK
TGNEKYSRDEIAFLKLRYQLPDATQSQLLSYPIRADQRVKSLAQASDDFRFAAAVAGLGQLLNQSHYLHQFDYNKLSALT
RSALGEDTSGYRHEFMQLVDTAAALAQTQRAPIKKSFDVGDKPFPPEDKLHQQ

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0103 [H]

Homologues:

Organism=Escherichia coli, GI1788606, Length=475, Percent_Identity=43.3684210526316, Blast_Score=416, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021908
- InterPro:   IPR022156
- InterPro:   IPR002035 [H]

Pfam domain/function: PF12034 DUF3520; PF00092 VWA; PF12450 vWF_A [H]

EC number: NA

Molecular weight: Translated: 66942; Mature: 66942

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50234 VWFA ; PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYPSSVFRHKAHLSFVVSGLTLAILLGLSACSDKAAEQQTPAELAAQAKLAAEQQAERQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH
ANRQRDAAIAMHEQASSAKLRTMSAESRAYIAQPTASISAAPALNGDWPGAVPPERNRFE
HHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH
KQVQNGIMVAGEIPVSTFAIDVDTGSYTTLRRMLKEGRLPQKDTLRVEEMLNYFSYDYPL
HHHHCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PGKNDAPFSVTTELAPSPYNDDMMLLRIGLKGYEQSKAELGASNLVFLLDVSGSMASPDK
CCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCCCCC
LPLLQTALKMLTQQLDAQDKVSIVVYAGAAGVVLDGAAGNDTQTLNYALEQLSAGGSTNG
CHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCC
AQGIQLAYQLAQKHFVEGGINRVILATDGDFNVGTTNLDELIDLVSARKQQGIGLTTLGF
CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
GMGDYNDHLMEQLADKGNGQYAYIDSINEARKVLVEHLSATLLTIAKEVKVQVEFNPALV
CCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEE
AEYRLIGYENRALAREDFNNDKVDAGEIGAGHTVTALYELRYVDAGNLANDKLRYGYNPK
EEEHEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEECCCCCC
TGNEKYSRDEIAFLKLRYQLPDATQSQLLSYPIRADQRVKSLAQASDDFRFAAAVAGLGQ
CCCCCCCCCCEEEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
LLNQSHYLHQFDYNKLSALTRSALGEDTSGYRHEFMQLVDTAAALAQTQRAPIKKSFDVG
HHCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DKPFPPEDKLHQQ
CCCCCCCHHCCCC
>Mature Secondary Structure
MRYPSSVFRHKAHLSFVVSGLTLAILLGLSACSDKAAEQQTPAELAAQAKLAAEQQAERQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH
ANRQRDAAIAMHEQASSAKLRTMSAESRAYIAQPTASISAAPALNGDWPGAVPPERNRFE
HHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH
KQVQNGIMVAGEIPVSTFAIDVDTGSYTTLRRMLKEGRLPQKDTLRVEEMLNYFSYDYPL
HHHHCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PGKNDAPFSVTTELAPSPYNDDMMLLRIGLKGYEQSKAELGASNLVFLLDVSGSMASPDK
CCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCCCCC
LPLLQTALKMLTQQLDAQDKVSIVVYAGAAGVVLDGAAGNDTQTLNYALEQLSAGGSTNG
CHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCC
AQGIQLAYQLAQKHFVEGGINRVILATDGDFNVGTTNLDELIDLVSARKQQGIGLTTLGF
CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
GMGDYNDHLMEQLADKGNGQYAYIDSINEARKVLVEHLSATLLTIAKEVKVQVEFNPALV
CCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEE
AEYRLIGYENRALAREDFNNDKVDAGEIGAGHTVTALYELRYVDAGNLANDKLRYGYNPK
EEEHEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEECCCCCC
TGNEKYSRDEIAFLKLRYQLPDATQSQLLSYPIRADQRVKSLAQASDDFRFAAAVAGLGQ
CCCCCCCCCCEEEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
LLNQSHYLHQFDYNKLSALTRSALGEDTSGYRHEFMQLVDTAAALAQTQRAPIKKSFDVG
HHCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DKPFPPEDKLHQQ
CCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]