| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921570
Identifier: 117921570
GI number: 117921570
Start: 3758013
End: 3758573
Strand: Reverse
Name: 117921570
Synonym: Shewana3_3132
Alternate gene names: NA
Gene position: 3758573-3758013 (Counterclockwise)
Preceding gene: 117921571
Following gene: 117921569
Centisome position: 75.59
GC content: 42.78
Gene sequence:
>561_bases ATGACTAAATTCGAACGATTGACGCATAACAGAATTCAAAGGGGCTTCTCTTTAATTGAAGTGCTTGTCGCATTGGTGAT TCTAGTGATTGGCTTGATCGGTATTTTTAATTTACACATTGTGGCTAAACGCGGCAGCTTTGAATCCTTTCAGCAAACAC AAGCCTCCTATTACGCCAATGATATTATCAACCGCATGAAGCTAAACCGAACACAGCTTGATAGCTATGCCGGAGAATAC ACTGGCGCCCCAAGTTCTGTCGCAAAGGTGTGTGAAAACACAACACTTTGCAATCCAACAGAATTGAAGTTGTGGGATAT TTTTGAATGGCAATCTTCGTTAACCGGAGAGTCTGAGACTGTTGGCACTCAAAACGTTGGGGGATTGGACTCTCCTACGG CTTGTATTGAAGTGAATAATCGTGATGTGCTCGTTGTGATTACTTGGCGAGGTATACGCGAGACCAATATTGATACCTCA GCCGTTGCAGATGCTGCAGACACTTGTGGTGCTGACACTAAAAATAGGCGCATTTTTTCACTTAAGACAGTGATTATTTA G
Upstream 100 bases:
>100_bases GGCTACTTACATTTTACTCATCTATTATTAACTGCTAGTAATGTTTTTATCGTAAGATTAAGATTTAAAAGGGTAAATAG CTGAAAAGCTTGTCAAAAAT
Downstream 100 bases:
>100_bases ATGAAAAAATCATTTCGTATGAAGTTAAGTAAAACCATGGAACGGGGAATGTCACTCGTTGAGTTGATGGTCGCTATGGT CATCGGGCTTTTTTTGACTG
Product: type IV pilus modification protein PilV
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilV; Methylation
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTKFERLTHNRIQRGFSLIEVLVALVILVIGLIGIFNLHIVAKRGSFESFQQTQASYYANDIINRMKLNRTQLDSYAGEY TGAPSSVAKVCENTTLCNPTELKLWDIFEWQSSLTGESETVGTQNVGGLDSPTACIEVNNRDVLVVITWRGIRETNIDTS AVADAADTCGADTKNRRIFSLKTVII
Sequences:
>Translated_186_residues MTKFERLTHNRIQRGFSLIEVLVALVILVIGLIGIFNLHIVAKRGSFESFQQTQASYYANDIINRMKLNRTQLDSYAGEY TGAPSSVAKVCENTTLCNPTELKLWDIFEWQSSLTGESETVGTQNVGGLDSPTACIEVNNRDVLVVITWRGIRETNIDTS AVADAADTCGADTKNRRIFSLKTVII >Mature_185_residues TKFERLTHNRIQRGFSLIEVLVALVILVIGLIGIFNLHIVAKRGSFESFQQTQASYYANDIINRMKLNRTQLDSYAGEYT GAPSSVAKVCENTTLCNPTELKLWDIFEWQSSLTGESETVGTQNVGGLDSPTACIEVNNRDVLVVITWRGIRETNIDTSA VADAADTCGADTKNRRIFSLKTVII
Specific function: Unknown
COG id: COG4967
COG function: function code NU; Tfp pilus assembly protein PilV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20620; Mature: 20489
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFERLTHNRIQRGFSLIEVLVALVILVIGLIGIFNLHIVAKRGSFESFQQTQASYYAN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHH DIINRMKLNRTQLDSYAGEYTGAPSSVAKVCENTTLCNPTELKLWDIFEWQSSLTGESET HHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCCCCC VGTQNVGGLDSPTACIEVNNRDVLVVITWRGIRETNIDTSAVADAADTCGADTKNRRIFS CCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEE LKTVII EEEECC >Mature Secondary Structure TKFERLTHNRIQRGFSLIEVLVALVILVIGLIGIFNLHIVAKRGSFESFQQTQASYYAN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHH DIINRMKLNRTQLDSYAGEYTGAPSSVAKVCENTTLCNPTELKLWDIFEWQSSLTGESET HHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCCCCC VGTQNVGGLDSPTACIEVNNRDVLVVITWRGIRETNIDTSAVADAADTCGADTKNRRIFS CCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEE LKTVII EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA