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The map label for this gene is rseB [H]

Identifier: 117921469

GI number: 117921469

Start: 3635650

End: 3636582

Strand: Reverse

Name: rseB [H]

Synonym: Shewana3_3030

Alternate gene names: 117921469

Gene position: 3636582-3635650 (Counterclockwise)

Preceding gene: 117921470

Following gene: 117921468

Centisome position: 73.14

GC content: 46.84

Gene sequence:

>933_bases
TTGCGTCTAATCCTGTTGGCTTTGTTAGCCTTGGTATTCCCTGCAGTGGCGCAGGAAGATATGCCTGCCAAAGTCTGGCT
TGAGAAAATGAGCCAGGCTTTAAAAGAGAAAGAGTTCAAAGCATCGATTATACAACTTCAGGCCGACCATATTCGGCCTT
TGGTTTATCTTCACGGTAAGGTGAATAATCAAGAAGTTGCGTTTCTTGAGTACCTCAATGGCCCGCCAAAAAATGCGGTC
AGAGTGGGCAATAGAGTCACCTTTATTGAACACGATCAACCCGCCTATAGCATCCTTTCTAATCATATTCAGGGCGTGTG
GCCTGCGGCTTTCTCGTCAAAGATGAGTGACTTAGAAGTGGGGTATCAGTTTGTGCTCGGTGGTCGTACGCGTATTGCGG
GACGTCCAGGTCAAATGATCCGTTTACTGCCAAATGATGAGTACCGTTACGGTTTCCAAATTTGGCTGGATATGGACACT
TATCTGCCGCTGAGATACGACATGCTAACTCAAGATAAACAATTACTTGAACAGCTGATGGTGATTGAGCTGATTGAGTT
AAATGAGCCGCCATCGATTCTGCAGGAAGCCTATAAACAAGAATGGCCAGCGGTTATCGATCAGGCCGAACGCCAAGATG
GACAAAACTGGCAGTTCTCTTGGTTACCAGCAGGATTTAGTGTGGTAGTGCGTGACCATCACCGTTTAATTGGCAGTCAC
GAGGCGGTTGAATATATTGCCTTAACCGATGGCTTAGCCAGCATTTCTGTCTATGTCGCGCGAGCTGGCTCGACGCCATT
ACCTGAAGAGTTAATCACTCGTAATGGCTTGTCTTTGGTGTCTGAAAAAGTGGGTAATGCCGAAGTAGTTGCCGTGGGTA
AAGTGCCTACCGAAACCTTGGCCCGTATCGCGAAAAGTCTGATGTTAGAATAA

Upstream 100 bases:

>100_bases
TCAGGACCATATGTTGCAACAACGATTGAATACGGGTGCCGTTGTAGAAGACAATAGCGAGGTTATTCCCGTTCCTGTCA
ATCAGTAGTAAGGAGTTAGC

Downstream 100 bases:

>100_bases
GGCCCCTTATCATGATGGAAGAAGTGGCGCGGGTTGTCGCCTGCGATAATCAAGGTTGGCTGACCGTCGAGGTAGAGCTC
AAAAGTACCTGTAAGAGCTG

Product: sigma E regulatory protein, MucB/RseB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MRLILLALLALVFPAVAQEDMPAKVWLEKMSQALKEKEFKASIIQLQADHIRPLVYLHGKVNNQEVAFLEYLNGPPKNAV
RVGNRVTFIEHDQPAYSILSNHIQGVWPAAFSSKMSDLEVGYQFVLGGRTRIAGRPGQMIRLLPNDEYRYGFQIWLDMDT
YLPLRYDMLTQDKQLLEQLMVIELIELNEPPSILQEAYKQEWPAVIDQAERQDGQNWQFSWLPAGFSVVVRDHHRLIGSH
EAVEYIALTDGLASISVYVARAGSTPLPEELITRNGLSLVSEKVGNAEVVAVGKVPTETLARIAKSLMLE

Sequences:

>Translated_310_residues
MRLILLALLALVFPAVAQEDMPAKVWLEKMSQALKEKEFKASIIQLQADHIRPLVYLHGKVNNQEVAFLEYLNGPPKNAV
RVGNRVTFIEHDQPAYSILSNHIQGVWPAAFSSKMSDLEVGYQFVLGGRTRIAGRPGQMIRLLPNDEYRYGFQIWLDMDT
YLPLRYDMLTQDKQLLEQLMVIELIELNEPPSILQEAYKQEWPAVIDQAERQDGQNWQFSWLPAGFSVVVRDHHRLIGSH
EAVEYIALTDGLASISVYVARAGSTPLPEELITRNGLSLVSEKVGNAEVVAVGKVPTETLARIAKSLMLE
>Mature_310_residues
MRLILLALLALVFPAVAQEDMPAKVWLEKMSQALKEKEFKASIIQLQADHIRPLVYLHGKVNNQEVAFLEYLNGPPKNAV
RVGNRVTFIEHDQPAYSILSNHIQGVWPAAFSSKMSDLEVGYQFVLGGRTRIAGRPGQMIRLLPNDEYRYGFQIWLDMDT
YLPLRYDMLTQDKQLLEQLMVIELIELNEPPSILQEAYKQEWPAVIDQAERQDGQNWQFSWLPAGFSVVVRDHHRLIGSH
EAVEYIALTDGLASISVYVARAGSTPLPEELITRNGLSLVSEKVGNAEVVAVGKVPTETLARIAKSLMLE

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=301, Percent_Identity=30.2325581395349, Blast_Score=142, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 34974; Mature: 34974

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLILLALLALVFPAVAQEDMPAKVWLEKMSQALKEKEFKASIIQLQADHIRPLVYLHGK
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCEEEEEECC
VNNQEVAFLEYLNGPPKNAVRVGNRVTFIEHDQPAYSILSNHIQGVWPAAFSSKMSDLEV
CCCCEEEEEECCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHCCHHHHHH
GYQFVLGGRTRIAGRPGQMIRLLPNDEYRYGFQIWLDMDTYLPLRYDMLTQDKQLLEQLM
CEEEEECCCEEECCCCCCEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
VIELIELNEPPSILQEAYKQEWPAVIDQAERQDGQNWQFSWLPAGFSVVVRDHHRLIGSH
HHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHHHHCCH
EAVEYIALTDGLASISVYVARAGSTPLPEELITRNGLSLVSEKVGNAEVVAVGKVPTETL
HHHEEEEECCCHHHEEEEEEECCCCCCCHHHHHCCCHHHHHHHCCCEEEEEECCCCHHHH
ARIAKSLMLE
HHHHHHHCCC
>Mature Secondary Structure
MRLILLALLALVFPAVAQEDMPAKVWLEKMSQALKEKEFKASIIQLQADHIRPLVYLHGK
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCEEEEEECC
VNNQEVAFLEYLNGPPKNAVRVGNRVTFIEHDQPAYSILSNHIQGVWPAAFSSKMSDLEV
CCCCEEEEEECCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHCCHHHHHH
GYQFVLGGRTRIAGRPGQMIRLLPNDEYRYGFQIWLDMDTYLPLRYDMLTQDKQLLEQLM
CEEEEECCCEEECCCCCCEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
VIELIELNEPPSILQEAYKQEWPAVIDQAERQDGQNWQFSWLPAGFSVVVRDHHRLIGSH
HHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHHHHCCH
EAVEYIALTDGLASISVYVARAGSTPLPEELITRNGLSLVSEKVGNAEVVAVGKVPTETL
HHHEEEEECCCHHHEEEEEEECCCCCCCHHHHHCCCHHHHHHHCCCEEEEEECCCCHHHH
ARIAKSLMLE
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]