| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921407
Identifier: 117921407
GI number: 117921407
Start: 3568991
End: 3569353
Strand: Reverse
Name: 117921407
Synonym: Shewana3_2968
Alternate gene names: NA
Gene position: 3569353-3568991 (Counterclockwise)
Preceding gene: 117921408
Following gene: 117921406
Centisome position: 71.79
GC content: 50.69
Gene sequence:
>363_bases ATGAGTACAAGTCAAGCGAGCAGCGCTAAACCCCTGCTTGCCACCATGGCCGCCGCCGTTGTTGCGGCGGTTGCCTCTAG CCTTTGCTGCATTGCGCCCTTAATTTATTTGGTGTTTGGCGTATCTGCGGCGGGGCTGTCGGGGTTATCGAGCTTAGCTT GGTTACAAGTGCCCATGTTGCTTCTATCAACCGGGTTGATTTTGCTGGGTTTTTGGCGCTTGTACTTTGCGAAAAAGCCG CTTTGCACAGGCAAGTTTAGCCGAGGACAAATGTTATTAGCCTATTGGCTGACTGTGCCTATTGTGCTGGCATTCCAACT GTATCCCTTTGTTTTACCTTGGCTACTTGAGGTGTTCGAATGA
Upstream 100 bases:
>100_bases TTCCCCGTGGCGGAGCAGACTCCACTGAACAATTTTGGTTATCCCTATGCCGAAGTGGACGGCGATCCTGTGAATTACTA TGAGCCAAAAGTTTTCGCCT
Downstream 100 bases:
>100_bases AGCCACTATTACGCACTACTCTCATACTCATAGTATCGCTGGGGTTTGCGCCATTCATTTGGGCGGATAACGTGCAGGTA ACACTCGATGTGAAAGGCAT
Product: mercuric transport protein MerT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSTSQASSAKPLLATMAAAVVAAVASSLCCIAPLIYLVFGVSAAGLSGLSSLAWLQVPMLLLSTGLILLGFWRLYFAKKP LCTGKFSRGQMLLAYWLTVPIVLAFQLYPFVLPWLLEVFE
Sequences:
>Translated_120_residues MSTSQASSAKPLLATMAAAVVAAVASSLCCIAPLIYLVFGVSAAGLSGLSSLAWLQVPMLLLSTGLILLGFWRLYFAKKP LCTGKFSRGQMLLAYWLTVPIVLAFQLYPFVLPWLLEVFE >Mature_119_residues STSQASSAKPLLATMAAAVVAAVASSLCCIAPLIYLVFGVSAAGLSGLSSLAWLQVPMLLLSTGLILLGFWRLYFAKKPL CTGKFSRGQMLLAYWLTVPIVLAFQLYPFVLPWLLEVFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12916; Mature: 12785
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSQASSAKPLLATMAAAVVAAVASSLCCIAPLIYLVFGVSAAGLSGLSSLAWLQVPML CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLSTGLILLGFWRLYFAKKPLCTGKFSRGQMLLAYWLTVPIVLAFQLYPFVLPWLLEVFE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure STSQASSAKPLLATMAAAVVAAVASSLCCIAPLIYLVFGVSAAGLSGLSSLAWLQVPML CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLSTGLILLGFWRLYFAKKPLCTGKFSRGQMLLAYWLTVPIVLAFQLYPFVLPWLLEVFE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]