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The map label for this gene is 117921397

Identifier: 117921397

GI number: 117921397

Start: 3550768

End: 3551529

Strand: Reverse

Name: 117921397

Synonym: Shewana3_2957

Alternate gene names: NA

Gene position: 3551529-3550768 (Counterclockwise)

Preceding gene: 117921398

Following gene: 117921396

Centisome position: 71.43

GC content: 42.65

Gene sequence:

>762_bases
ATGGTCAATAGTATAACTCCGCAACAATTCGAACCTGCATTTGATATTGCTAAGGCTATGCGCGAAGGGCGTTTAGATAC
ATCTCAAGCTCTTGAACGAATGGTTGAAAATGGCTTTAGTCATAGTTCTGCAACCATGTACCTGAACGCACTTATGGCGA
TGCCAGTTGGAAAGGTATATCAAAAAACCATTAATAACCCAGCAGCTCGCTATTATCTGCAGAGATTTATGAGCGAGATG
ACTGCGACTGAATTTGCGACTGTATTATTGTCAGTCACGAGGCATATACATTACTACAATGCACAAGGAGCGGGTAAACA
TCGGCAATTGGCCACCATCCTAGCGGAGTTTCAATCTCTAGCTAAAGTACATTACGGTCAAAACTTTAACCCTACACTAC
TACCTTCTGAGATTAGTGAAGCCGAAACCGGATTTGTATTTCATGAAGGCGCGATGAAAACCATTGAGCTTAGTGTGCAT
GAGCGAGAACCTGCTGCACGAAGAGCTTGTATTGAGCATTATGGTGTTTCTTGCCACGTGTGTGGATTCGATTTTGAGCA
TGCCTATGGTGATATAGGAAAAGGTTTCATTCATGTTCACCATAGAGTTGATTTAGCTTTAGTTTCAAATCGCAGAGAAG
TTAACCCTATTGAAGATCTGATCCCCGTATGCCCTAACTGCCATGCTATGCTGCATACTGAAACGCCCGCGATGGCGGTC
GATAAACTCAAAGAATTGCTTAAACAGAATCTTCAAGGATGA

Upstream 100 bases:

>100_bases
ATTTGCGGGCTCATAGAGATCTCCCGGAAGTGAAAGATATTTTGAATCTGGATTAATAGTTTTCGCTAAGTCTGACTAGT
AGTAACCTCAAGGACGAGCA

Downstream 100 bases:

>100_bases
ACCGACTGTGGGATTATTAAGCGAAATTAACGCATTTTTCTCTCTCAAAGATAGGTTTTGGAAAGCTTCAGCAAATGAAC
CGGAAGCGCCTAACACTGCG

Product: HNH endonuclease

Products: NA

Alternate protein names: Restriction Endonuclease-Like Protein; 5-Methylcytosine-Specific Restriction A; Restriction Endonuclease; Endonuclease; HNH Endonuclease Family Protein; Hnh Endonuclease; Endonuclease-Like Protein

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MVNSITPQQFEPAFDIAKAMREGRLDTSQALERMVENGFSHSSATMYLNALMAMPVGKVYQKTINNPAARYYLQRFMSEM
TATEFATVLLSVTRHIHYYNAQGAGKHRQLATILAEFQSLAKVHYGQNFNPTLLPSEISEAETGFVFHEGAMKTIELSVH
EREPAARRACIEHYGVSCHVCGFDFEHAYGDIGKGFIHVHHRVDLALVSNRREVNPIEDLIPVCPNCHAMLHTETPAMAV
DKLKELLKQNLQG

Sequences:

>Translated_253_residues
MVNSITPQQFEPAFDIAKAMREGRLDTSQALERMVENGFSHSSATMYLNALMAMPVGKVYQKTINNPAARYYLQRFMSEM
TATEFATVLLSVTRHIHYYNAQGAGKHRQLATILAEFQSLAKVHYGQNFNPTLLPSEISEAETGFVFHEGAMKTIELSVH
EREPAARRACIEHYGVSCHVCGFDFEHAYGDIGKGFIHVHHRVDLALVSNRREVNPIEDLIPVCPNCHAMLHTETPAMAV
DKLKELLKQNLQG
>Mature_253_residues
MVNSITPQQFEPAFDIAKAMREGRLDTSQALERMVENGFSHSSATMYLNALMAMPVGKVYQKTINNPAARYYLQRFMSEM
TATEFATVLLSVTRHIHYYNAQGAGKHRQLATILAEFQSLAKVHYGQNFNPTLLPSEISEAETGFVFHEGAMKTIELSVH
EREPAARRACIEHYGVSCHVCGFDFEHAYGDIGKGFIHVHHRVDLALVSNRREVNPIEDLIPVCPNCHAMLHTETPAMAV
DKLKELLKQNLQG

Specific function: Unknown

COG id: COG3183

COG function: function code V; Predicted restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28430; Mature: 28430

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNSITPQQFEPAFDIAKAMREGRLDTSQALERMVENGFSHSSATMYLNALMAMPVGKVY
CCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHH
QKTINNPAARYYLQRFMSEMTATEFATVLLSVTRHIHYYNAQGAGKHRQLATILAEFQSL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH
AKVHYGQNFNPTLLPSEISEAETGFVFHEGAMKTIELSVHEREPAARRACIEHYGVSCHV
HHHHCCCCCCCCCCCHHHHHHHCCEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCEEEE
CGFDFEHAYGDIGKGFIHVHHRVDLALVSNRREVNPIEDLIPVCPNCHAMLHTETPAMAV
ECCCHHHHHHHHCCCEEEEHHHHEEHHHCCCCCCCCHHHHHCCCCCCCEEEECCCCHHHH
DKLKELLKQNLQG
HHHHHHHHHHCCC
>Mature Secondary Structure
MVNSITPQQFEPAFDIAKAMREGRLDTSQALERMVENGFSHSSATMYLNALMAMPVGKVY
CCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHH
QKTINNPAARYYLQRFMSEMTATEFATVLLSVTRHIHYYNAQGAGKHRQLATILAEFQSL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH
AKVHYGQNFNPTLLPSEISEAETGFVFHEGAMKTIELSVHEREPAARRACIEHYGVSCHV
HHHHCCCCCCCCCCCHHHHHHHCCEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCEEEE
CGFDFEHAYGDIGKGFIHVHHRVDLALVSNRREVNPIEDLIPVCPNCHAMLHTETPAMAV
ECCCHHHHHHHHCCCEEEEHHHHEEHHHCCCCCCCCHHHHHCCCCCCCEEEECCCCHHHH
DKLKELLKQNLQG
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA