| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921388
Identifier: 117921388
GI number: 117921388
Start: 3542442
End: 3543233
Strand: Reverse
Name: 117921388
Synonym: Shewana3_2948
Alternate gene names: NA
Gene position: 3543233-3542442 (Counterclockwise)
Preceding gene: 117921390
Following gene: 117921387
Centisome position: 71.26
GC content: 49.49
Gene sequence:
>792_bases TTGGGATCACTCGTTTGTGTGGGTACGGGGTTACAGCTCGCGGGGCAAATTAGCGTATTAAGCCGCAGCTATATTGAACA TGCCGATATTGTATTTTCACTCTTACCAGACGGTTTCTCGCAGCGTTGGTTGACGAAGCTCAACCCCAATGTCATCAATT TGCAGCAGTTTTATGCGCAAAATGGTGAAGTTAAAAATCGCCGAGACACCTACGAGCAAATGGTCAATGCCATTCTAGAT GCGGTGAGAGCGGGTAAAAAAACCGTGTGTGCACTCTATGGTCATCCGGGGGTATTTGCCTGTGTATCCCATATGGCGAT AACTCGCGCCAAGGCCGAAGGGTTTTCGGCCAAGATGGAGCCGGGGATTTCGGCCGAAGCTTGCCTGTGGGCCGACTTAG GGATTGATCCCGGCAACTCAGGGCATCAAAGCTTTGAAGCCAGCCAGTTTATGTTTTTCAACCATGTGCCGGATCCCACC ACCCACTTATTACTCTGGCAAATCGCCATTGCGGGCGAACATACCCTAACCCAATTTCATACCTCGAGTGACAGGTTGCA GATCCTCGTGGAGCAGTTAAATCAATGGTATCCCCTCAACCATGAGGTGGTCATCTACGAAGCGGCCAATTTGCCAATCC AAGCCCCCCGTATCGAGCGTTTACCTTTAGCGAATTTACCCCAAGCACACTTAACGCCGATTAGTACGTTGTTAATTCCG CCAGCAAAAAAGCTGGAGTACAACTATGCTATTTTGGCTAAGTTAGGGATCGGTCCCGAAGATTTGGGCTAA
Upstream 100 bases:
>100_bases TCGCGACTTTAGGGAGTAGCATAGGGTTTAGCGGTTGCTATCAAAGTTATGGCTTGAGTTCATCAATCAGCCTGCGGTAG TGCATTTTTAGGAGAGACCA
Downstream 100 bases:
>100_bases ATTGAAGTGTGATATTGAGTCATTATTAACAATAAGGAATAAGTATGTCTGCATTATCGGATTTTTTTACCCAGCTAGGC CAAGATGCGCTGTTAATGGA
Product: uroporphyrin-III C/tetrapyrrole methyltransferase
Products: NA
Alternate protein names: Methylase; Tetrapyrrole Methylase; Uroporphyrinogen III Methylase; Tetrapyrrole Methylases Domain Protein
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MGSLVCVGTGLQLAGQISVLSRSYIEHADIVFSLLPDGFSQRWLTKLNPNVINLQQFYAQNGEVKNRRDTYEQMVNAILD AVRAGKKTVCALYGHPGVFACVSHMAITRAKAEGFSAKMEPGISAEACLWADLGIDPGNSGHQSFEASQFMFFNHVPDPT THLLLWQIAIAGEHTLTQFHTSSDRLQILVEQLNQWYPLNHEVVIYEAANLPIQAPRIERLPLANLPQAHLTPISTLLIP PAKKLEYNYAILAKLGIGPEDLG
Sequences:
>Translated_263_residues MGSLVCVGTGLQLAGQISVLSRSYIEHADIVFSLLPDGFSQRWLTKLNPNVINLQQFYAQNGEVKNRRDTYEQMVNAILD AVRAGKKTVCALYGHPGVFACVSHMAITRAKAEGFSAKMEPGISAEACLWADLGIDPGNSGHQSFEASQFMFFNHVPDPT THLLLWQIAIAGEHTLTQFHTSSDRLQILVEQLNQWYPLNHEVVIYEAANLPIQAPRIERLPLANLPQAHLTPISTLLIP PAKKLEYNYAILAKLGIGPEDLG >Mature_262_residues GSLVCVGTGLQLAGQISVLSRSYIEHADIVFSLLPDGFSQRWLTKLNPNVINLQQFYAQNGEVKNRRDTYEQMVNAILDA VRAGKKTVCALYGHPGVFACVSHMAITRAKAEGFSAKMEPGISAEACLWADLGIDPGNSGHQSFEASQFMFFNHVPDPTT HLLLWQIAIAGEHTLTQFHTSSDRLQILVEQLNQWYPLNHEVVIYEAANLPIQAPRIERLPLANLPQAHLTPISTLLIPP AKKLEYNYAILAKLGIGPEDLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29010; Mature: 28878
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLVCVGTGLQLAGQISVLSRSYIEHADIVFSLLPDGFSQRWLTKLNPNVINLQQFYAQ CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHC NGEVKNRRDTYEQMVNAILDAVRAGKKTVCALYGHPGVFACVSHMAITRAKAEGFSAKME CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC PGISAEACLWADLGIDPGNSGHQSFEASQFMFFNHVPDPTTHLLLWQIAIAGEHTLTQFH CCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEEECCCHHHEEEC TSSDRLQILVEQLNQWYPLNHEVVIYEAANLPIQAPRIERLPLANLPQAHLTPISTLLIP CCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCHHHEECC PAKKLEYNYAILAKLGIGPEDLG CHHHHCCCEEEEEEECCCHHCCC >Mature Secondary Structure GSLVCVGTGLQLAGQISVLSRSYIEHADIVFSLLPDGFSQRWLTKLNPNVINLQQFYAQ CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHC NGEVKNRRDTYEQMVNAILDAVRAGKKTVCALYGHPGVFACVSHMAITRAKAEGFSAKME CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC PGISAEACLWADLGIDPGNSGHQSFEASQFMFFNHVPDPTTHLLLWQIAIAGEHTLTQFH CCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEEECCCHHHEEEC TSSDRLQILVEQLNQWYPLNHEVVIYEAANLPIQAPRIERLPLANLPQAHLTPISTLLIP CCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCHHHEECC PAKKLEYNYAILAKLGIGPEDLG CHHHHCCCEEEEEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA