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The map label for this gene is 117921324

Identifier: 117921324

GI number: 117921324

Start: 3448820

End: 3450982

Strand: Direct

Name: 117921324

Synonym: Shewana3_2883

Alternate gene names: NA

Gene position: 3448820-3450982 (Clockwise)

Preceding gene: 117921322

Following gene: 117921325

Centisome position: 69.36

GC content: 46.74

Gene sequence:

>2163_bases
ATGCGTAAATTCATTGTTATTTTCGTGACCTTGTTGATGTCTATTTCGTTTCAAACACAGGCTGCCGATCTCGAAGCCGA
AGAAATAGAATTGCGTGAAACGCCACAGAAGATGTACGACAGGCTCAATCAATCCCTTTCTTTTCCTATCGCCTTTAAGA
CCCGCGAACAGTTTGAACGTGCTGCCCAAGAGCAGGGCTACAGCAGCGATGAATTCGAGCATATTTTGCAGCTACTGGCG
CGATTGAATATGGAGCCGAATGTAAAATCTAAGGTCGGGTTTCAAGACGCTAATACCCTTATCGAATTGCTTGCAAGCAT
AGCGCAAACGCCGTTCGAGCAAGCCACGGTCGCCATGTTAAAGGGCCGCTATATAGGCCGCACCGAGCAAAAATACCAAG
AAGCCATCGCCTTTTATAATGAGGCGCTGACACGGATTAACGACAGTTACGATGTCGAGTCCATGCTGCTCAAGCACACA
ATTCATGAACACTTAGGCGGTTTGCACCTCGTTATCCGTCAGGATGTGCCTGCCTTAATGCATTTTCATACCTATCGCGA
TATCGCCTACAAACTCAGGAACGATTATTTGATTGCGGCGGCCGAGTCAAAGCTCGGGCATTATTACAATAAAAATCAGC
AACTCACTAAGTCATTACAACACTATAGCGAAGCGATTCGCCTATCTAATCGCTCCAATTATCCTTCGATGAAGACCCAT
CTGCAGCTACAACTGGCGAAGGTCTATCGGGATTTAAAACAATGGGATGAAGCCTTAAAGAATGCCCATGAGGCCGCCGC
TGGCTTTAAAAAACTGGGCAACGACACTTATCTGTCCAGCTGTATGACGGTCATCGCCATGGTGTATGGCGAACAAGGGG
ATTGGAACCGCGCCATCGATTACTATCTCAATGCCCAGCAGCTCGATGCTAAACGCGGTAACTACATCGCTCAAGGGTTG
AACTTCCATAATCTCGGCCAAGCCTATTCGCACTTAGATGACGAGGCAAACGCCCTCAAATATTTACTGATGGCGAACCA
AATCTTTGTTGAAAAACAAAGTCATCACTATTTAGTTTATAACGAGCTACTGATCGGTGAGATAGCCCAAGCTAAGGAAG
ATTGGTCGCTGATGATGAGCCATGCCGAAAACGCTTTGGCCCTAGCGACCGATTTAAAATTGCAAGATGAGCAAAAGTCG
GCACTGACGCAAATCGCCCTGTCGGCGGAAAAACTTAACGATCAAGCCAAGGTGATAAGCACACAAAAACGCATTATCGA
ATTAAGCCAAGCATCCGAAAATACCGCGCAGGACTCGTCGGTATCTTCCTCAGTACTGGCCGAGCAGCAACTCAAACTTG
AGCTCAGTATGCTACAGGGCAAACTGAACGATGCGATTGAAACCACTAAAAATACCAACAAGTTGCTTGCCTTGAGTGGT
CTTATCGCCACGCTACTCTTAGTGGGAATAGTTATCCTATTAAATCAACGCCGTAAAACGAGGCGCCAAAACGCAGCCTT
ACTCGCAGTAAGTTTGCAGGAGCCTTTTACTCAGCATCAAGGCTATGCCGCACTCTTAAAGGATCTGGCTCAGCCTCCTG
CGAATGCGTCCACTACTGCCCTCGCCTTGATTGAATTTGGCGAACACGTCAATACCGATCTGAATCACGGCCAATACTTT
GCTAATGCTATTACCCAACAATTGACTCACCATATAGGCAATAGTCTATTAATGCCCGTCTATGTGATCCGCCAAGGCTT
ATTTGCCGTAAGATTTACTGAGGCGCTAGAGCCGCAGCAAGTATTACACACGCTGCGTAGATACCTTGATGGCAAAGGCT
TAAGCCATAGCTTTAACCTTGGCTTGATTAATTTGCCTCTGCTAGCCAAAGCAGAAATTAAAATCGCCCCCAAATTACTG
TTTGAAACAGTGCAAATGGCATTGGCGGGTGCCCGAAGTTTACCGAATGATACCAGCCATTATGTGTGCCTAAGGGCCTT
GGATTTTGTACCGCCAACACTCTTTGCAAACCCGCTATTCTTGCACTTGGAGAAAGGGATTGAGCGCGGCCTTATTCGAG
TCGACACCGATGCACCTAAGGAGCAGATTGCCTGGCCCTGCTGGGAAAACAACCAAGATAGGCATTTATTGGAAAATATT
TGA

Upstream 100 bases:

>100_bases
TTTTTCCAAGTATAACAAGTCGATGTAGCATCCTCATTAGGCGCTAACAAAAGCTAACAAAATAAGTTCCTTGACTTAGG
GAATATAGGGCCACCTACAC

Downstream 100 bases:

>100_bases
TCAATATCGACTATTAATCACAAGGACATGGGCAAACCGATTTGCACTCCACTGCCGTTGTTATAACATTAGTAGCATAT
GAGTTAACTGCTAATCTAGA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein

Number of amino acids: Translated: 720; Mature: 720

Protein sequence:

>720_residues
MRKFIVIFVTLLMSISFQTQAADLEAEEIELRETPQKMYDRLNQSLSFPIAFKTREQFERAAQEQGYSSDEFEHILQLLA
RLNMEPNVKSKVGFQDANTLIELLASIAQTPFEQATVAMLKGRYIGRTEQKYQEAIAFYNEALTRINDSYDVESMLLKHT
IHEHLGGLHLVIRQDVPALMHFHTYRDIAYKLRNDYLIAAAESKLGHYYNKNQQLTKSLQHYSEAIRLSNRSNYPSMKTH
LQLQLAKVYRDLKQWDEALKNAHEAAAGFKKLGNDTYLSSCMTVIAMVYGEQGDWNRAIDYYLNAQQLDAKRGNYIAQGL
NFHNLGQAYSHLDDEANALKYLLMANQIFVEKQSHHYLVYNELLIGEIAQAKEDWSLMMSHAENALALATDLKLQDEQKS
ALTQIALSAEKLNDQAKVISTQKRIIELSQASENTAQDSSVSSSVLAEQQLKLELSMLQGKLNDAIETTKNTNKLLALSG
LIATLLLVGIVILLNQRRKTRRQNAALLAVSLQEPFTQHQGYAALLKDLAQPPANASTTALALIEFGEHVNTDLNHGQYF
ANAITQQLTHHIGNSLLMPVYVIRQGLFAVRFTEALEPQQVLHTLRRYLDGKGLSHSFNLGLINLPLLAKAEIKIAPKLL
FETVQMALAGARSLPNDTSHYVCLRALDFVPPTLFANPLFLHLEKGIERGLIRVDTDAPKEQIAWPCWENNQDRHLLENI

Sequences:

>Translated_720_residues
MRKFIVIFVTLLMSISFQTQAADLEAEEIELRETPQKMYDRLNQSLSFPIAFKTREQFERAAQEQGYSSDEFEHILQLLA
RLNMEPNVKSKVGFQDANTLIELLASIAQTPFEQATVAMLKGRYIGRTEQKYQEAIAFYNEALTRINDSYDVESMLLKHT
IHEHLGGLHLVIRQDVPALMHFHTYRDIAYKLRNDYLIAAAESKLGHYYNKNQQLTKSLQHYSEAIRLSNRSNYPSMKTH
LQLQLAKVYRDLKQWDEALKNAHEAAAGFKKLGNDTYLSSCMTVIAMVYGEQGDWNRAIDYYLNAQQLDAKRGNYIAQGL
NFHNLGQAYSHLDDEANALKYLLMANQIFVEKQSHHYLVYNELLIGEIAQAKEDWSLMMSHAENALALATDLKLQDEQKS
ALTQIALSAEKLNDQAKVISTQKRIIELSQASENTAQDSSVSSSVLAEQQLKLELSMLQGKLNDAIETTKNTNKLLALSG
LIATLLLVGIVILLNQRRKTRRQNAALLAVSLQEPFTQHQGYAALLKDLAQPPANASTTALALIEFGEHVNTDLNHGQYF
ANAITQQLTHHIGNSLLMPVYVIRQGLFAVRFTEALEPQQVLHTLRRYLDGKGLSHSFNLGLINLPLLAKAEIKIAPKLL
FETVQMALAGARSLPNDTSHYVCLRALDFVPPTLFANPLFLHLEKGIERGLIRVDTDAPKEQIAWPCWENNQDRHLLENI
>Mature_720_residues
MRKFIVIFVTLLMSISFQTQAADLEAEEIELRETPQKMYDRLNQSLSFPIAFKTREQFERAAQEQGYSSDEFEHILQLLA
RLNMEPNVKSKVGFQDANTLIELLASIAQTPFEQATVAMLKGRYIGRTEQKYQEAIAFYNEALTRINDSYDVESMLLKHT
IHEHLGGLHLVIRQDVPALMHFHTYRDIAYKLRNDYLIAAAESKLGHYYNKNQQLTKSLQHYSEAIRLSNRSNYPSMKTH
LQLQLAKVYRDLKQWDEALKNAHEAAAGFKKLGNDTYLSSCMTVIAMVYGEQGDWNRAIDYYLNAQQLDAKRGNYIAQGL
NFHNLGQAYSHLDDEANALKYLLMANQIFVEKQSHHYLVYNELLIGEIAQAKEDWSLMMSHAENALALATDLKLQDEQKS
ALTQIALSAEKLNDQAKVISTQKRIIELSQASENTAQDSSVSSSVLAEQQLKLELSMLQGKLNDAIETTKNTNKLLALSG
LIATLLLVGIVILLNQRRKTRRQNAALLAVSLQEPFTQHQGYAALLKDLAQPPANASTTALALIEFGEHVNTDLNHGQYF
ANAITQQLTHHIGNSLLMPVYVIRQGLFAVRFTEALEPQQVLHTLRRYLDGKGLSHSFNLGLINLPLLAKAEIKIAPKLL
FETVQMALAGARSLPNDTSHYVCLRALDFVPPTLFANPLFLHLEKGIERGLIRVDTDAPKEQIAWPCWENNQDRHLLENI

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81509; Mature: 81509

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFIVIFVTLLMSISFQTQAADLEAEEIELRETPQKMYDRLNQSLSFPIAFKTREQFER
CCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCHHHHHHHHCCCCCCCEEECCHHHHHH
AAQEQGYSSDEFEHILQLLARLNMEPNVKSKVGFQDANTLIELLASIAQTPFEQATVAML
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
KGRYIGRTEQKYQEAIAFYNEALTRINDSYDVESMLLKHTIHEHLGGLHLVIRQDVPALM
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHH
HFHTYRDIAYKLRNDYLIAAAESKLGHYYNKNQQLTKSLQHYSEAIRLSNRSNYPSMKTH
HHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LQLQLAKVYRDLKQWDEALKNAHEAAAGFKKLGNDTYLSSCMTVIAMVYGEQGDWNRAID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHH
YYLNAQQLDAKRGNYIAQGLNFHNLGQAYSHLDDEANALKYLLMANQIFVEKQSHHYLVY
HHCCHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCEEEE
NELLIGEIAQAKEDWSLMMSHAENALALATDLKLQDEQKSALTQIALSAEKLNDQAKVIS
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
TQKRIIELSQASENTAQDSSVSSSVLAEQQLKLELSMLQGKLNDAIETTKNTNKLLALSG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LIATLLLVGIVILLNQRRKTRRQNAALLAVSLQEPFTQHQGYAALLKDLAQPPANASTTA
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCHHHHCCHHHHHHHHCCCCCCCCHHH
LALIEFGEHVNTDLNHGQYFANAITQQLTHHIGNSLLMPVYVIRQGLFAVRFTEALEPQQ
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHH
VLHTLRRYLDGKGLSHSFNLGLINLPLLAKAEIKIAPKLLFETVQMALAGARSLPNDTSH
HHHHHHHHHCCCCCCCCCCCCEEECCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
YVCLRALDFVPPTLFANPLFLHLEKGIERGLIRVDTDAPKEQIAWPCWENNQDRHLLENI
HHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCEEECCCCCHHHCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MRKFIVIFVTLLMSISFQTQAADLEAEEIELRETPQKMYDRLNQSLSFPIAFKTREQFER
CCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCHHHHHHHHCCCCCCCEEECCHHHHHH
AAQEQGYSSDEFEHILQLLARLNMEPNVKSKVGFQDANTLIELLASIAQTPFEQATVAML
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
KGRYIGRTEQKYQEAIAFYNEALTRINDSYDVESMLLKHTIHEHLGGLHLVIRQDVPALM
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHH
HFHTYRDIAYKLRNDYLIAAAESKLGHYYNKNQQLTKSLQHYSEAIRLSNRSNYPSMKTH
HHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LQLQLAKVYRDLKQWDEALKNAHEAAAGFKKLGNDTYLSSCMTVIAMVYGEQGDWNRAID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHH
YYLNAQQLDAKRGNYIAQGLNFHNLGQAYSHLDDEANALKYLLMANQIFVEKQSHHYLVY
HHCCHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCEEEE
NELLIGEIAQAKEDWSLMMSHAENALALATDLKLQDEQKSALTQIALSAEKLNDQAKVIS
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
TQKRIIELSQASENTAQDSSVSSSVLAEQQLKLELSMLQGKLNDAIETTKNTNKLLALSG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LIATLLLVGIVILLNQRRKTRRQNAALLAVSLQEPFTQHQGYAALLKDLAQPPANASTTA
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCHHHHCCHHHHHHHHCCCCCCCCHHH
LALIEFGEHVNTDLNHGQYFANAITQQLTHHIGNSLLMPVYVIRQGLFAVRFTEALEPQQ
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHH
VLHTLRRYLDGKGLSHSFNLGLINLPLLAKAEIKIAPKLLFETVQMALAGARSLPNDTSH
HHHHHHHHHCCCCCCCCCCCCEEECCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
YVCLRALDFVPPTLFANPLFLHLEKGIERGLIRVDTDAPKEQIAWPCWENNQDRHLLENI
HHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCEEECCCCCHHHCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA