| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921304
Identifier: 117921304
GI number: 117921304
Start: 3423499
End: 3424206
Strand: Direct
Name: 117921304
Synonym: Shewana3_2863
Alternate gene names: NA
Gene position: 3423499-3424206 (Clockwise)
Preceding gene: 117921301
Following gene: 117921306
Centisome position: 68.85
GC content: 50.0
Gene sequence:
>708_bases ATGACTAAGCGAACCGCACAACCCCAAACCGAGTTGGCATTTACGGCCGCCAGCTTAGATTTTCTCAAACTGCTGGCGCT CAATAACTCCCGTGACTGGTTTAAAGCCCATCAGGAAGAATATGAAAGTAAGGTCAGAACCCCTGCGCTGCGTTTTATCG AGCAAATTCAGCCCGATATTGTTGCTATTTCCCCAAGATTAACGGCGGTTGCCAAAAAAGTCGGTGGCAGCTTAATGCGC CCACAGCGCGATAGCCGCTTTAGCAACGACAAAACGCCCTACAAGACCAATGTGGGGATCCAGTTTCGGCATTTTCAGGG CAAAGATGTGCATGCACCAGGGCTGTATTTACACATTGCCGAGGATGGATGTTTTATTGCCGCCGGTATTTGGCATCCCG AATCCAAGGTGCTGAATGCCATTCGGACTTGTATCGATGAAAACCCCAACGGCTATAAAAAGGCGCTGCAGACCTTAACC AGTCAAGGATTTGTGATGGATGGTGATAGTTTGACTCGCCCGCCTAAGGGATTCGATAAACATCACCCAATGCTAGACGA GCTGAAACGTAAGGACTTTATCGCGCTAAAACCAATCCCCTTCGAGCGACTCTGCCAAGCCGATGCCGCCCGCTACTGCG CCGAACAATTCGCCCACTGTAGCCAATTGATGGCCTACTTGTGCTTCGCCCTCGAATTAGACTTTTAG
Upstream 100 bases:
>100_bases AAGAATTTGCAATATCCACGCGCATTTGTTCAACTCGCACTAGCCTGTTTTGATTAACGGTCGGAATCCCAGTCTCAAGC ACCTCAAAGGTTTTATGGAC
Downstream 100 bases:
>100_bases TTTTTGCTGTTGACGAGGCCAAGCATTCACTTGGCCTCATGCTTTTCGGTTTTGCTTAAGGGCTATTTCACATCGACGGG TTTAAGTGGCGTTAATGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MTKRTAQPQTELAFTAASLDFLKLLALNNSRDWFKAHQEEYESKVRTPALRFIEQIQPDIVAISPRLTAVAKKVGGSLMR PQRDSRFSNDKTPYKTNVGIQFRHFQGKDVHAPGLYLHIAEDGCFIAAGIWHPESKVLNAIRTCIDENPNGYKKALQTLT SQGFVMDGDSLTRPPKGFDKHHPMLDELKRKDFIALKPIPFERLCQADAARYCAEQFAHCSQLMAYLCFALELDF
Sequences:
>Translated_235_residues MTKRTAQPQTELAFTAASLDFLKLLALNNSRDWFKAHQEEYESKVRTPALRFIEQIQPDIVAISPRLTAVAKKVGGSLMR PQRDSRFSNDKTPYKTNVGIQFRHFQGKDVHAPGLYLHIAEDGCFIAAGIWHPESKVLNAIRTCIDENPNGYKKALQTLT SQGFVMDGDSLTRPPKGFDKHHPMLDELKRKDFIALKPIPFERLCQADAARYCAEQFAHCSQLMAYLCFALELDF >Mature_234_residues TKRTAQPQTELAFTAASLDFLKLLALNNSRDWFKAHQEEYESKVRTPALRFIEQIQPDIVAISPRLTAVAKKVGGSLMRP QRDSRFSNDKTPYKTNVGIQFRHFQGKDVHAPGLYLHIAEDGCFIAAGIWHPESKVLNAIRTCIDENPNGYKKALQTLTS QGFVMDGDSLTRPPKGFDKHHPMLDELKRKDFIALKPIPFERLCQADAARYCAEQFAHCSQLMAYLCFALELDF
Specific function: Unknown
COG id: COG5587
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26673; Mature: 26542
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRTAQPQTELAFTAASLDFLKLLALNNSRDWFKAHQEEYESKVRTPALRFIEQIQPDI CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCE VAISPRLTAVAKKVGGSLMRPQRDSRFSNDKTPYKTNVGIQFRHFQGKDVHAPGLYLHIA EEECHHHHHHHHHHCCHHCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCEEEEEE EDGCFIAAGIWHPESKVLNAIRTCIDENPNGYKKALQTLTSQGFVMDGDSLTRPPKGFDK CCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEECCCCCCCCCCCCCC HHPMLDELKRKDFIALKPIPFERLCQADAARYCAEQFAHCSQLMAYLCFALELDF CCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKRTAQPQTELAFTAASLDFLKLLALNNSRDWFKAHQEEYESKVRTPALRFIEQIQPDI CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCE VAISPRLTAVAKKVGGSLMRPQRDSRFSNDKTPYKTNVGIQFRHFQGKDVHAPGLYLHIA EEECHHHHHHHHHHCCHHCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCEEEEEE EDGCFIAAGIWHPESKVLNAIRTCIDENPNGYKKALQTLTSQGFVMDGDSLTRPPKGFDK CCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEECCCCCCCCCCCCCC HHPMLDELKRKDFIALKPIPFERLCQADAARYCAEQFAHCSQLMAYLCFALELDF CCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA