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The map label for this gene is 117921282

Identifier: 117921282

GI number: 117921282

Start: 3394311

End: 3396575

Strand: Direct

Name: 117921282

Synonym: Shewana3_2841

Alternate gene names: NA

Gene position: 3394311-3396575 (Clockwise)

Preceding gene: 117921281

Following gene: 117921283

Centisome position: 68.27

GC content: 50.11

Gene sequence:

>2265_bases
ATGCAGAGTGTGCTTAGCCATACTCAAACTGATGCCACTGCGCTGCAACGCTTGCTGGCCTCTCGGGTGCGACTTAATGT
CGAAGATAAGCCATTAACCAATGAGTCGACAGATGATCCAACCTTAGTTGGCTTACTCAGCGAGCAGCTCGCCCATATTG
CGCAAAAACAACTTGTTGAAATTCGCTTTGAATATCAGCAGCAAGTCCGTTGCCTGTATCTGCTCAATGGGCTGCTTGCC
GCACAATTACATCTGCATGCCGAGGCTTATATTTCAGCATTAGCGCAAATCCAAGCTGAAACCGCCGAAGAAACAAATAC
AAATACTATCAATACAAATACAGTCGAGCGCTGCTTAAACAGCGCTTTTACCTTGGCGAAACGCGATTGTGCTCAGGCGG
TTAATAGCTACGCGCAGGCAGGCAATCTTGCCAGTCAGTTGAATGTATTAGCTCAAGCGGTTGAGGCATTTAGTCATCGA
ACGCTAGCAGGTATGACACCAATGCTTGACGCGACTGATGCAGCACAACTTGCTGAACAATACGCTGAACTGGGCGCTGA
AAAGCCCGTAAAAACCGCGCAGAACGGCTATTGGTTTACCAAGCCCCATCAGGCAAGGGTGTTAAGCCTAAATCTCTTGG
GTAATATCTTGGGTAAGCCCCCTCAAGCGAGCACTGCCCAAAGCCTTATCTTGACCCAAGGCACTCGGCTTATCCCTCAG
CCATTGCTCAATGCCAATAGGCTTTTTATTCCCATTAGCGGTAATACGCTTGAGTCGTTAACGGCAAAGCTATCGCAACT
CATTGATTCATTAGATTTATCGGCAAGCCTTCCCGATACAGATTGGCTCAGCAGCCAAGGCAGTGATTGGTTTAAGCGCT
ATCAAGCAAAGGATACATTGGCATTAGTACTTATGGCAGGCTCCCTTGAGGAGTTAATGCAAGAAGCCAAGGCGATGCGC
GCTTATATTGAAAAGACGCAACAGACTCCAGCGCCAATGACAACGCCATCGGCCAATCTAGCCTTTAAAACTCCTTCGGG
CAGCTATTATACGCCAACGCCCCTCGGCGATACGGGCTTAACCTTTGTCTACCCCGGCGTCGGCACGGTTTACCCGAATA
TGTTCAGTGACTTACATGGCTATTTCCCTGAACTTTATCGCGAGCTTGAACGTGAAGGGGATTTAGCCGCCATGCTGCAG
GCCGAGGCGATTTACCACAGCGCTGCTTATGCCAAAAGTACTGTTGATGCAAAAGACGCGGCAGAGATGAGCTTAAGCCA
GCTTGCGATTAGCGGTGTTGGCGCCAGTTACCTATTTAGTCGGCTGTTAACTCGAATCTTTAATATCCAACCGCAACTCG
CTCTGGGCTATTCCATGGGTGAAGCGGCCATGTGGGCAAGTTTGGATATCTGGCAAACGCCACATGCCCTGATTAACGCC
ACCCAAAACAGCGCCATCTTCAATCAGGAGATTTCAGGCCCACTGCTTGCGGTGCGCCGCGATTGGCAGTTGAGTGAAGA
TGCTCCGCTGGTGTGGAATAGCTTTTTAGTGCGCGCCTCTCGCGCCGAAATTAATGCCCTGCTCCCTGATTTTCCACGGG
TTTATCTGGCGATTGAACAGGGTGATACCTGTATTATCGCGGGCTGCGAAACAAGCTGCTTACAACTCCTTAAAAGGCTG
AATAAGCGTGGCATTGCCAGCAATAAAGTCACCGCCATGCATACCCCGCCCTCGCAGTCACAGCACAGTGCTATCCAAAG
GTTTTATACCTTGGGCTTAAAGGCGAATGCCTGCGAGACTCAGGTGCGTTTTATTAGCGCGGCGCAGCAAAGCGCCGTCA
GTATCGACAGCCAAAGCATTGCCAAGAGTATTGCCGATACCTTTTGTGCGCCGCTTAATTTTACCGCGCTGATTAACACC
GCCTATAACCAAGGTGCGCGCTTATTTGTTGAGGTGGGCGCCGATCGGCAAACCAGCACACTTATCGATAAAATCGGCCG
CCAACTTGAGTTGGGTGCCGATGGCACTCAAACACAGGGGCAACCGATATTAGCAATGGCATGTAATGCCAAGGGCAGCG
ATACGATCACTTGCTTACTCAAATGCTTAGCTCAACTTATCAGCCATAGAGTGCCACTCTCCCTTGCGCCGCTTATGCCT
CAATCGGCAGATAAGGCTAGAGCGAAAACGATAGCGCCACATTCTGCCAGCGCCAGCGCATTAGGCCATTTTTCAAACGT
ATTCCAAGAAGGAGAACCCCTTTGA

Upstream 100 bases:

>100_bases
CGACCCAAGCGCACATGCCGCATTAAGCAATGCGACATTAAACAGTCCGCCTCCCAATGCCAAGCCACTGCGAATTGCCG
TATGGCTTGGTGATGGGTGG

Downstream 100 bases:

>100_bases
GTTCTCAAATGCATGCTCACCCTACTCAGCAAGACAGCACCGCTGTGCCAAACGACCAGCGCCAAAGCTCAAAGGCGATG
CCAAAGATTGCCATCGTCGG

Product: omega-3 polyunsaturated fatty acid synthase PfaB

Products: NA

Alternate protein names: Beta-Ketoacyl Synthase; PfaB Family Protein; Polyunsaturated Fatty Acid Synthase PfaB; Polyketide Synthase; Beta-Ketoacyl Synthase HglC; LOW QUALITY PROTEIN Polyketide Synthase; LOW QUALITY PROTEIN Beta-Ketoacyl Synthase; Heterocyst Glycolipid Synthase; Glycolipid Synthase; Short-Chain Dehydrogenase/Reductase; Multi-Domain Beta-Ketoacyl Polyketide Synthase; Beta Keto-Acyl Synthase; Polyketide Synthase Modules And Related Proteins-Like

Number of amino acids: Translated: 754; Mature: 754

Protein sequence:

>754_residues
MQSVLSHTQTDATALQRLLASRVRLNVEDKPLTNESTDDPTLVGLLSEQLAHIAQKQLVEIRFEYQQQVRCLYLLNGLLA
AQLHLHAEAYISALAQIQAETAEETNTNTINTNTVERCLNSAFTLAKRDCAQAVNSYAQAGNLASQLNVLAQAVEAFSHR
TLAGMTPMLDATDAAQLAEQYAELGAEKPVKTAQNGYWFTKPHQARVLSLNLLGNILGKPPQASTAQSLILTQGTRLIPQ
PLLNANRLFIPISGNTLESLTAKLSQLIDSLDLSASLPDTDWLSSQGSDWFKRYQAKDTLALVLMAGSLEELMQEAKAMR
AYIEKTQQTPAPMTTPSANLAFKTPSGSYYTPTPLGDTGLTFVYPGVGTVYPNMFSDLHGYFPELYRELEREGDLAAMLQ
AEAIYHSAAYAKSTVDAKDAAEMSLSQLAISGVGASYLFSRLLTRIFNIQPQLALGYSMGEAAMWASLDIWQTPHALINA
TQNSAIFNQEISGPLLAVRRDWQLSEDAPLVWNSFLVRASRAEINALLPDFPRVYLAIEQGDTCIIAGCETSCLQLLKRL
NKRGIASNKVTAMHTPPSQSQHSAIQRFYTLGLKANACETQVRFISAAQQSAVSIDSQSIAKSIADTFCAPLNFTALINT
AYNQGARLFVEVGADRQTSTLIDKIGRQLELGADGTQTQGQPILAMACNAKGSDTITCLLKCLAQLISHRVPLSLAPLMP
QSADKARAKTIAPHSASASALGHFSNVFQEGEPL

Sequences:

>Translated_754_residues
MQSVLSHTQTDATALQRLLASRVRLNVEDKPLTNESTDDPTLVGLLSEQLAHIAQKQLVEIRFEYQQQVRCLYLLNGLLA
AQLHLHAEAYISALAQIQAETAEETNTNTINTNTVERCLNSAFTLAKRDCAQAVNSYAQAGNLASQLNVLAQAVEAFSHR
TLAGMTPMLDATDAAQLAEQYAELGAEKPVKTAQNGYWFTKPHQARVLSLNLLGNILGKPPQASTAQSLILTQGTRLIPQ
PLLNANRLFIPISGNTLESLTAKLSQLIDSLDLSASLPDTDWLSSQGSDWFKRYQAKDTLALVLMAGSLEELMQEAKAMR
AYIEKTQQTPAPMTTPSANLAFKTPSGSYYTPTPLGDTGLTFVYPGVGTVYPNMFSDLHGYFPELYRELEREGDLAAMLQ
AEAIYHSAAYAKSTVDAKDAAEMSLSQLAISGVGASYLFSRLLTRIFNIQPQLALGYSMGEAAMWASLDIWQTPHALINA
TQNSAIFNQEISGPLLAVRRDWQLSEDAPLVWNSFLVRASRAEINALLPDFPRVYLAIEQGDTCIIAGCETSCLQLLKRL
NKRGIASNKVTAMHTPPSQSQHSAIQRFYTLGLKANACETQVRFISAAQQSAVSIDSQSIAKSIADTFCAPLNFTALINT
AYNQGARLFVEVGADRQTSTLIDKIGRQLELGADGTQTQGQPILAMACNAKGSDTITCLLKCLAQLISHRVPLSLAPLMP
QSADKARAKTIAPHSASASALGHFSNVFQEGEPL
>Mature_754_residues
MQSVLSHTQTDATALQRLLASRVRLNVEDKPLTNESTDDPTLVGLLSEQLAHIAQKQLVEIRFEYQQQVRCLYLLNGLLA
AQLHLHAEAYISALAQIQAETAEETNTNTINTNTVERCLNSAFTLAKRDCAQAVNSYAQAGNLASQLNVLAQAVEAFSHR
TLAGMTPMLDATDAAQLAEQYAELGAEKPVKTAQNGYWFTKPHQARVLSLNLLGNILGKPPQASTAQSLILTQGTRLIPQ
PLLNANRLFIPISGNTLESLTAKLSQLIDSLDLSASLPDTDWLSSQGSDWFKRYQAKDTLALVLMAGSLEELMQEAKAMR
AYIEKTQQTPAPMTTPSANLAFKTPSGSYYTPTPLGDTGLTFVYPGVGTVYPNMFSDLHGYFPELYRELEREGDLAAMLQ
AEAIYHSAAYAKSTVDAKDAAEMSLSQLAISGVGASYLFSRLLTRIFNIQPQLALGYSMGEAAMWASLDIWQTPHALINA
TQNSAIFNQEISGPLLAVRRDWQLSEDAPLVWNSFLVRASRAEINALLPDFPRVYLAIEQGDTCIIAGCETSCLQLLKRL
NKRGIASNKVTAMHTPPSQSQHSAIQRFYTLGLKANACETQVRFISAAQQSAVSIDSQSIAKSIADTFCAPLNFTALINT
AYNQGARLFVEVGADRQTSTLIDKIGRQLELGADGTQTQGQPILAMACNAKGSDTITCLLKCLAQLISHRVPLSLAPLMP
QSADKARAKTIAPHSASASALGHFSNVFQEGEPL

Specific function: Unknown

COG id: COG3321

COG function: function code Q; Polyketide synthase modules and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81852; Mature: 81852

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSVLSHTQTDATALQRLLASRVRLNVEDKPLTNESTDDPTLVGLLSEQLAHIAQKQLVE
CCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IRFEYQQQVRCLYLLNGLLAAQLHLHAEAYISALAQIQAETAEETNTNTINTNTVERCLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SAFTLAKRDCAQAVNSYAQAGNLASQLNVLAQAVEAFSHRTLAGMTPMLDATDAAQLAEQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHH
YAELGAEKPVKTAQNGYWFTKPHQARVLSLNLLGNILGKPPQASTAQSLILTQGTRLIPQ
HHHCCCCCCCHHCCCCEEECCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCH
PLLNANRLFIPISGNTLESLTAKLSQLIDSLDLSASLPDTDWLSSQGSDWFKRYQAKDTL
HHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHCCHHH
ALVLMAGSLEELMQEAKAMRAYIEKTQQTPAPMTTPSANLAFKTPSGSYYTPTPLGDTGL
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCC
TFVYPGVGTVYPNMFSDLHGYFPELYRELEREGDLAAMLQAEAIYHSAAYAKSTVDAKDA
EEEECCCHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
AEMSLSQLAISGVGASYLFSRLLTRIFNIQPQLALGYSMGEAAMWASLDIWQTPHALINA
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHEECHHHCCCHHHHCC
TQNSAIFNQEISGPLLAVRRDWQLSEDAPLVWNSFLVRASRAEINALLPDFPRVYLAIEQ
CCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
GDTCIIAGCETSCLQLLKRLNKRGIASNKVTAMHTPPSQSQHSAIQRFYTLGLKANACET
CCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHH
QVRFISAAQQSAVSIDSQSIAKSIADTFCAPLNFTALINTAYNQGARLFVEVGADRQTST
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHH
LIDKIGRQLELGADGTQTQGQPILAMACNAKGSDTITCLLKCLAQLISHRVPLSLAPLMP
HHHHCCCEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEECCCCC
QSADKARAKTIAPHSASASALGHFSNVFQEGEPL
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQSVLSHTQTDATALQRLLASRVRLNVEDKPLTNESTDDPTLVGLLSEQLAHIAQKQLVE
CCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IRFEYQQQVRCLYLLNGLLAAQLHLHAEAYISALAQIQAETAEETNTNTINTNTVERCLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SAFTLAKRDCAQAVNSYAQAGNLASQLNVLAQAVEAFSHRTLAGMTPMLDATDAAQLAEQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHH
YAELGAEKPVKTAQNGYWFTKPHQARVLSLNLLGNILGKPPQASTAQSLILTQGTRLIPQ
HHHCCCCCCCHHCCCCEEECCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCH
PLLNANRLFIPISGNTLESLTAKLSQLIDSLDLSASLPDTDWLSSQGSDWFKRYQAKDTL
HHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHCCHHH
ALVLMAGSLEELMQEAKAMRAYIEKTQQTPAPMTTPSANLAFKTPSGSYYTPTPLGDTGL
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCC
TFVYPGVGTVYPNMFSDLHGYFPELYRELEREGDLAAMLQAEAIYHSAAYAKSTVDAKDA
EEEECCCHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
AEMSLSQLAISGVGASYLFSRLLTRIFNIQPQLALGYSMGEAAMWASLDIWQTPHALINA
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHEECHHHCCCHHHHCC
TQNSAIFNQEISGPLLAVRRDWQLSEDAPLVWNSFLVRASRAEINALLPDFPRVYLAIEQ
CCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
GDTCIIAGCETSCLQLLKRLNKRGIASNKVTAMHTPPSQSQHSAIQRFYTLGLKANACET
CCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHH
QVRFISAAQQSAVSIDSQSIAKSIADTFCAPLNFTALINTAYNQGARLFVEVGADRQTST
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHH
LIDKIGRQLELGADGTQTQGQPILAMACNAKGSDTITCLLKCLAQLISHRVPLSLAPLMP
HHHHCCCEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEECCCCC
QSADKARAKTIAPHSASASALGHFSNVFQEGEPL
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA