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The map label for this gene is 117921280

Identifier: 117921280

GI number: 117921280

Start: 3385466

End: 3386335

Strand: Direct

Name: 117921280

Synonym: Shewana3_2839

Alternate gene names: NA

Gene position: 3385466-3386335 (Clockwise)

Preceding gene: 117921276

Following gene: 117921281

Centisome position: 68.09

GC content: 50.23

Gene sequence:

>870_bases
ATGAGTTCTCGAAAAGTGGGTACTCAAGCCGCGGATCATGCTCAGGCTGATAAGCCAAACTCGGAGCACAAATCCGCCCC
CAAAACGGCTAGGCACCGCAATGCCACAACCACGCCGGAGATGCGACACTTTATTCAGCAATCTGAATTAAGTGTGAGTC
AGCTTGCCAAAATTTTAAATATTACTGAAGCGACCGTGCGTAAATGGCGCAAGCGCGAGTCGGTAAACGACAGCCCGAAT
ACCCCGCATCACCTCAATACCACCCTCACGCCGATGGAAGAATACGTGGTAGTGGGACTGAGATATCAGCTTAAACTGCC
ATTAGATAGGCTGCTCAAGGCCACTCAAACCTTTATCAACCCCAATGTGTCCCGCTCGGGATTAGCCCGCTGCCTTAAGC
GTTATGGAGTTTCGCGCCTCGATGAGTTTGATCAAGAGCTCGTGCCAAAACAATATTTTAATCAATTACCTATCAGCCAA
GGCAGCGATGTTCAGACCTACACGGTTAACTCCGAAACCTTGGCCAAGGCGCTTGCCCTGCCAAGTACCGATGGCGATAC
CGTAGTGCAAGTGGTGTCCCTCACCCTGCCGCCGCAATTGACCGAGGCCGAACCTAAATCGGTACTCCTTGGCATAGATA
GCAAGGCAGATTGGATTTATATCGATATTTATCAAGACAGTAACACCCAAGCGGCCAATCGCTACATCGCCTACGTGCTG
AAAGATGGGCCGTTTCATCTGCGTAAATTGCTGGTACGCAACTACCACACTTTTTTAGCCCGCTTTCCTGGCGTACAAAC
CCCAAAAGCCATCGCTAAATCCCTTAATAAGGCAACGGCCAAACGCTTTGCCAGTGGAGACTCGTTATGA

Upstream 100 bases:

>100_bases
GATTAAGCATGAGTCCACACTCCGCTTTTGCTGGCAAGTTTAAGCAGTCCCGATAGATTATGTTGGATGAAAATAATAAA
GATGGGACAGCACTAACAAG

Downstream 100 bases:

>100_bases
GCCATACCCCTTCACAGCCTCAATTATCAACCGATGAAAAAGCCGATAAGAGACTGAATAAACGCTTAAAAGATATGCCG
ATTGCCATCGTAGGCATGGC

Product: transcriptional regulator

Products: NA

Alternate protein names: Integrase Catalytic Region; Transcriptional Regulator; Integrase Catalytic Subunit; Integrase; Integrase Protein; Integrase Catalytic Domain-Containing Protein; Fis Family Transcriptional Regulator; ISKpn8 Transposase; Instegrase; Integrase Catalytic Core

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSSRKVGTQAADHAQADKPNSEHKSAPKTARHRNATTTPEMRHFIQQSELSVSQLAKILNITEATVRKWRKRESVNDSPN
TPHHLNTTLTPMEEYVVVGLRYQLKLPLDRLLKATQTFINPNVSRSGLARCLKRYGVSRLDEFDQELVPKQYFNQLPISQ
GSDVQTYTVNSETLAKALALPSTDGDTVVQVVSLTLPPQLTEAEPKSVLLGIDSKADWIYIDIYQDSNTQAANRYIAYVL
KDGPFHLRKLLVRNYHTFLARFPGVQTPKAIAKSLNKATAKRFASGDSL

Sequences:

>Translated_289_residues
MSSRKVGTQAADHAQADKPNSEHKSAPKTARHRNATTTPEMRHFIQQSELSVSQLAKILNITEATVRKWRKRESVNDSPN
TPHHLNTTLTPMEEYVVVGLRYQLKLPLDRLLKATQTFINPNVSRSGLARCLKRYGVSRLDEFDQELVPKQYFNQLPISQ
GSDVQTYTVNSETLAKALALPSTDGDTVVQVVSLTLPPQLTEAEPKSVLLGIDSKADWIYIDIYQDSNTQAANRYIAYVL
KDGPFHLRKLLVRNYHTFLARFPGVQTPKAIAKSLNKATAKRFASGDSL
>Mature_288_residues
SSRKVGTQAADHAQADKPNSEHKSAPKTARHRNATTTPEMRHFIQQSELSVSQLAKILNITEATVRKWRKRESVNDSPNT
PHHLNTTLTPMEEYVVVGLRYQLKLPLDRLLKATQTFINPNVSRSGLARCLKRYGVSRLDEFDQELVPKQYFNQLPISQG
SDVQTYTVNSETLAKALALPSTDGDTVVQVVSLTLPPQLTEAEPKSVLLGIDSKADWIYIDIYQDSNTQAANRYIAYVLK
DGPFHLRKLLVRNYHTFLARFPGVQTPKAIAKSLNKATAKRFASGDSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32383; Mature: 32252

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRKVGTQAADHAQADKPNSEHKSAPKTARHRNATTTPEMRHFIQQSELSVSQLAKILN
CCCCCCCCHHHHHHCCCCCCCHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
ITEATVRKWRKRESVNDSPNTPHHLNTTLTPMEEYVVVGLRYQLKLPLDRLLKATQTFIN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHEEHHHEEEECCHHHHHHHHHHHHC
PNVSRSGLARCLKRYGVSRLDEFDQELVPKQYFNQLPISQGSDVQTYTVNSETLAKALAL
CCCCHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEECHHHHHHHHHC
PSTDGDTVVQVVSLTLPPQLTEAEPKSVLLGIDSKADWIYIDIYQDSNTQAANRYIAYVL
CCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHEEEEEE
KDGPFHLRKLLVRNYHTFLARFPGVQTPKAIAKSLNKATAKRFASGDSL
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSRKVGTQAADHAQADKPNSEHKSAPKTARHRNATTTPEMRHFIQQSELSVSQLAKILN
CCCCCCCHHHHHHCCCCCCCHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
ITEATVRKWRKRESVNDSPNTPHHLNTTLTPMEEYVVVGLRYQLKLPLDRLLKATQTFIN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHEEHHHEEEECCHHHHHHHHHHHHC
PNVSRSGLARCLKRYGVSRLDEFDQELVPKQYFNQLPISQGSDVQTYTVNSETLAKALAL
CCCCHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEECHHHHHHHHHC
PSTDGDTVVQVVSLTLPPQLTEAEPKSVLLGIDSKADWIYIDIYQDSNTQAANRYIAYVL
CCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHEEEEEE
KDGPFHLRKLLVRNYHTFLARFPGVQTPKAIAKSLNKATAKRFASGDSL
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA