Click here to switch to the map view.

The map label for this gene is 117921274

Identifier: 117921274

GI number: 117921274

Start: 3379959

End: 3380732

Strand: Direct

Name: 117921274

Synonym: Shewana3_2833

Alternate gene names: NA

Gene position: 3379959-3380732 (Clockwise)

Preceding gene: 117921273

Following gene: 117921276

Centisome position: 67.98

GC content: 49.74

Gene sequence:

>774_bases
ATGTTTGTCACCGAATTGCGCTTTGAATGCTTTGCCGATACCACCATCAGTGCGGCAGAACGTGCCATCAATCAATTACT
CGAAGCCTACCGCGCTAATGGCCAAATCCTTGGCCGCGAATTTGCCGTGGCCTTCAATGAGGGCGAATTCCGAGTACGCC
TACTCACGCCTGAAAAAAACAGTTTGGCTCATCGTTATCACAGCCCTTGGGTGAAAAAAGCACTGGCAGAATTAACCGAG
GCTAAGCTACTGGCGCCACGCGAAAAATTTATCGGTCAAGATATTAATTCTGAGGTGAGTAACACTGAGTCACCCAGTTG
GCAACTGCTCTACACTAGCTATGTACATATGTGCTCGCCCCTGCGAAGTGGCGATAACTTGCTGCCCATTCCGCTATACC
AAATCCCCGCCACCTTTAATGGCGATCATAAACGGGTGATCCGCTGGCAAACCGAGTGGCAAGCCTGTGATGAGTTACAA
ATGGCGGCAGCCACTAAGGCAGAATTTGCCGCGCTGGAAGAATTATCCAGCCCAAACAGTGATTTATTTAGAAGAGGTTG
GGACTTACGCGGCCGAATCGAATACCTAACCAAAATCCCCACTTACTATTATTTGTATCGCGTCGGGGGGCAGGATCTGC
AATCCGAGTTAGCTCGCCCCTGCCCACGCTGTGGCAGTCACGACTGGAAACTCAATGAGCCGCTATTAGATATGTTCCAC
TTTCGCTGCGAACCTTGCCGCATAGTGTCTAACTTGTCTTGGGATCATCAATAA

Upstream 100 bases:

>100_bases
CACTCGCGTTAAAAAACAACGAGATCATGCAACTCAAAAATGAACTTATCGAGCTGAAACAACGTGTCACTCAACTCGAA
TCCCAAGGAAAATCCGCTTA

Downstream 100 bases:

>100_bases
CTGACCCATTGATGAATGGCAAACTCGGCAGGCAAAATTGCCGAGCCGAGTTTGCGAAACAGGTTTGCAAGAGGCTTTTC
AAGAGACCTTTGCACATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MFVTELRFECFADTTISAAERAINQLLEAYRANGQILGREFAVAFNEGEFRVRLLTPEKNSLAHRYHSPWVKKALAELTE
AKLLAPREKFIGQDINSEVSNTESPSWQLLYTSYVHMCSPLRSGDNLLPIPLYQIPATFNGDHKRVIRWQTEWQACDELQ
MAAATKAEFAALEELSSPNSDLFRRGWDLRGRIEYLTKIPTYYYLYRVGGQDLQSELARPCPRCGSHDWKLNEPLLDMFH
FRCEPCRIVSNLSWDHQ

Sequences:

>Translated_257_residues
MFVTELRFECFADTTISAAERAINQLLEAYRANGQILGREFAVAFNEGEFRVRLLTPEKNSLAHRYHSPWVKKALAELTE
AKLLAPREKFIGQDINSEVSNTESPSWQLLYTSYVHMCSPLRSGDNLLPIPLYQIPATFNGDHKRVIRWQTEWQACDELQ
MAAATKAEFAALEELSSPNSDLFRRGWDLRGRIEYLTKIPTYYYLYRVGGQDLQSELARPCPRCGSHDWKLNEPLLDMFH
FRCEPCRIVSNLSWDHQ
>Mature_257_residues
MFVTELRFECFADTTISAAERAINQLLEAYRANGQILGREFAVAFNEGEFRVRLLTPEKNSLAHRYHSPWVKKALAELTE
AKLLAPREKFIGQDINSEVSNTESPSWQLLYTSYVHMCSPLRSGDNLLPIPLYQIPATFNGDHKRVIRWQTEWQACDELQ
MAAATKAEFAALEELSSPNSDLFRRGWDLRGRIEYLTKIPTYYYLYRVGGQDLQSELARPCPRCGSHDWKLNEPLLDMFH
FRCEPCRIVSNLSWDHQ

Specific function: Unknown

COG id: COG5595

COG function: function code R; Zn-ribbon-containing, possibly nucleic-acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016908 [H]

Pfam domain/function: PF10071 DUF2310 [H]

EC number: NA

Molecular weight: Translated: 29751; Mature: 29751

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVTELRFECFADTTISAAERAINQLLEAYRANGQILGREFAVAFNEGEFRVRLLTPEKN
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECEEEEEEECCCCEEEEEECCCCH
SLAHRYHSPWVKKALAELTEAKLLAPREKFIGQDINSEVSNTESPSWQLLYTSYVHMCSP
HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHCCCCCCCEEEHHHHHHHHHHH
LRSGDNLLPIPLYQIPATFNGDHKRVIRWQTEWQACDELQMAAATKAEFAALEELSSPNS
HCCCCCCCCCCCEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DLFRRGWDLRGRIEYLTKIPTYYYLYRVGGQDLQSELARPCPRCGSHDWKLNEPLLDMFH
HHHHCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
FRCEPCRIVSNLSWDHQ
HCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MFVTELRFECFADTTISAAERAINQLLEAYRANGQILGREFAVAFNEGEFRVRLLTPEKN
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECEEEEEEECCCCEEEEEECCCCH
SLAHRYHSPWVKKALAELTEAKLLAPREKFIGQDINSEVSNTESPSWQLLYTSYVHMCSP
HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHCCCCCCCEEEHHHHHHHHHHH
LRSGDNLLPIPLYQIPATFNGDHKRVIRWQTEWQACDELQMAAATKAEFAALEELSSPNS
HCCCCCCCCCCCEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DLFRRGWDLRGRIEYLTKIPTYYYLYRVGGQDLQSELARPCPRCGSHDWKLNEPLLDMFH
HHHHCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
FRCEPCRIVSNLSWDHQ
HCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]