Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921272

Identifier: 117921272

GI number: 117921272

Start: 3379030

End: 3379428

Strand: Reverse

Name: 117921272

Synonym: Shewana3_2831

Alternate gene names: NA

Gene position: 3379428-3379030 (Counterclockwise)

Preceding gene: 117921275

Following gene: 117921270

Centisome position: 67.97

GC content: 46.37

Gene sequence:

>399_bases
ATGAACGCAAATATTAATCGCAAACTCATCGCGGTCACGTTTTTAGGGTTAGCAAGCTTAGGTCTTAGCGGTTGTGTGGT
CAATGTCGGCGACAGTGAATCTAAGTGGGATAGCAACGAATCTTGGGAAAAAACACAGGACAAAAACCGCAATAATCTGA
CTAAGCTCAGCCTTGGCATGAGCAAAGACCAAGTGATGACCCTGATGGGCGCCTCGGATTTTAGCGAATCTTATCTGCAG
CAGAAAGACGGCCAAGCCGATAAAGAAGTGTTGGTACTCTTCTATCGCACCCAGCATACCCACAGTGACGGTAAAACCAC
TAAGGATGAATGCACACCAATCGTCTTAAGTAACAGTGTGTTGGTCGGGTGGGGCGACACTGCTTACAGCAAAATTTAA

Upstream 100 bases:

>100_bases
GTGGTGTGGTTATTTTAGTTCTTATAAATCAATGCATTGCTGTTTGGCATTGATTTTGCTTTTTAAGCATTTTTATAACA
AGTACACAGGAAGTCATAAT

Downstream 100 bases:

>100_bases
CGACTCAACGCAACTCGCTATTAAGTGGTTCAGTGTCAGCCCTAAACTATTAGGGCTTTCTTAATTGCACATCTAGCTGC
TCGATAAGTTCGGTCCACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MNANINRKLIAVTFLGLASLGLSGCVVNVGDSESKWDSNESWEKTQDKNRNNLTKLSLGMSKDQVMTLMGASDFSESYLQ
QKDGQADKEVLVLFYRTQHTHSDGKTTKDECTPIVLSNSVLVGWGDTAYSKI

Sequences:

>Translated_132_residues
MNANINRKLIAVTFLGLASLGLSGCVVNVGDSESKWDSNESWEKTQDKNRNNLTKLSLGMSKDQVMTLMGASDFSESYLQ
QKDGQADKEVLVLFYRTQHTHSDGKTTKDECTPIVLSNSVLVGWGDTAYSKI
>Mature_132_residues
MNANINRKLIAVTFLGLASLGLSGCVVNVGDSESKWDSNESWEKTQDKNRNNLTKLSLGMSKDQVMTLMGASDFSESYLQ
QKDGQADKEVLVLFYRTQHTHSDGKTTKDECTPIVLSNSVLVGWGDTAYSKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14552; Mature: 14552

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNANINRKLIAVTFLGLASLGLSGCVVNVGDSESKWDSNESWEKTQDKNRNNLTKLSLGM
CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEECCC
SKDQVMTLMGASDFSESYLQQKDGQADKEVLVLFYRTQHTHSDGKTTKDECTPIVLSNSV
CHHHEEEEECCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCE
LVGWGDTAYSKI
EEEECCCCCCCC
>Mature Secondary Structure
MNANINRKLIAVTFLGLASLGLSGCVVNVGDSESKWDSNESWEKTQDKNRNNLTKLSLGM
CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEECCC
SKDQVMTLMGASDFSESYLQQKDGQADKEVLVLFYRTQHTHSDGKTTKDECTPIVLSNSV
CHHHEEEEECCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCE
LVGWGDTAYSKI
EEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA