| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is leuO [C]
Identifier: 117921227
GI number: 117921227
Start: 3324641
End: 3325654
Strand: Direct
Name: leuO [C]
Synonym: Shewana3_2786
Alternate gene names: 117921227
Gene position: 3324641-3325654 (Clockwise)
Preceding gene: 117921226
Following gene: 117921228
Centisome position: 66.86
GC content: 48.52
Gene sequence:
>1014_bases ATGTCTGCATATCGGGCGCACAGGCAAGGCAATCCCATGAGCAATCCCTTACTAAAACAAATCTGTGAACTCGACGTCTT TACCCTGCTCGTCTTTAAAAGCATTTTTGATACAGGCCATGCTAATAGTGCGGCTAAAGCATTAAATGTATCGGCTCCTA AGATTAGCCGTTGCCTGAATGCCCTACGATTAACGTTTAACGATGAGCTATTCTACCGCCGTCAACAGGGGCTCAAACCC ACCCCTTTAGCCGAGAGCCTCTATTTTGCTATCTGCCAGTTTACCGATTCGGTATATCACTTAGAGCAATCCGCACTACA AATTCAAAATGCGACCAGCCATGTTGAGCGGCCGCTACAAATAGCGGTGAGTAATGGGTTGCTGAGTTTTTTAGCGCCGC AGCTCAGTTCCCCCGAAGCAGTGGATGAGTTAGGGCAAGTCAGGTTACATAAGTGGCAGGAAAACAGTGCCGAATTAATC CACGCCGGAGAATTAGATTTTGGGATCTCACTGGAGAATGCAGAGAGCAAAGAGTTAACCGTCAGTCGCTTGGGTGGGAT CTCGATGATTTACGTGGTCGCCGCTAAGCAGCATCCCATATGGCAAGTTCAAACCCATATCAGTCTAGAACAGATATGTC GCCATCCGTTCTTGTGCATTGAACTCAAAGGATTTAACAGCAGAATCGATCCTCTCGAGCTCTTCTGTCAGCGCCAAGGG ATCTTATTGCCTTCGCTCGAAAAGGTACTCGATAGAGAAGAATGGTACGCTCATCTACTGACCATGCAGAGTGTGGCCTT CTGCTCAGGTATCGATATGCACACGGTCAAACATATGCCGGGGCTCAAATTAGCACCGCTACCGCTCACCGAACTGCATC GCCTGCACGATACTATTATGCCGCCACAATATTATTTAGTTGAAAAGCCTCGCAGCCACCGACGTTACAGCCCTGCCCAA TGTGAACTCGTCGTCAGCTCCTTACTGACGGCGCTTAGCCAAACTTACGCCTAA
Upstream 100 bases:
>100_bases TTTACTCTTGTTATATTCACGCCATTGGTTACACATTTGTTAATTTAACGATTGGATCACAGTTAAGCCGTATGGCAACT GCTAACCTTGCCTATCAATA
Downstream 100 bases:
>100_bases ATCCAGCCTTATTGCCATGGCATGCAGGCGCCATTTACTTTGTTGCAAATCTGCTTCTGAATGTTAAATCCAACCTAAAG AGGGATAAAAATTGACTCAA
Product: LysR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator-Like Protein; Regulatory Protein LysR; Transcriptional Regulator LysR Family Protein; Transcriptional Regulator LysR Family
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSAYRAHRQGNPMSNPLLKQICELDVFTLLVFKSIFDTGHANSAAKALNVSAPKISRCLNALRLTFNDELFYRRQQGLKP TPLAESLYFAICQFTDSVYHLEQSALQIQNATSHVERPLQIAVSNGLLSFLAPQLSSPEAVDELGQVRLHKWQENSAELI HAGELDFGISLENAESKELTVSRLGGISMIYVVAAKQHPIWQVQTHISLEQICRHPFLCIELKGFNSRIDPLELFCQRQG ILLPSLEKVLDREEWYAHLLTMQSVAFCSGIDMHTVKHMPGLKLAPLPLTELHRLHDTIMPPQYYLVEKPRSHRRYSPAQ CELVVSSLLTALSQTYA
Sequences:
>Translated_337_residues MSAYRAHRQGNPMSNPLLKQICELDVFTLLVFKSIFDTGHANSAAKALNVSAPKISRCLNALRLTFNDELFYRRQQGLKP TPLAESLYFAICQFTDSVYHLEQSALQIQNATSHVERPLQIAVSNGLLSFLAPQLSSPEAVDELGQVRLHKWQENSAELI HAGELDFGISLENAESKELTVSRLGGISMIYVVAAKQHPIWQVQTHISLEQICRHPFLCIELKGFNSRIDPLELFCQRQG ILLPSLEKVLDREEWYAHLLTMQSVAFCSGIDMHTVKHMPGLKLAPLPLTELHRLHDTIMPPQYYLVEKPRSHRRYSPAQ CELVVSSLLTALSQTYA >Mature_336_residues SAYRAHRQGNPMSNPLLKQICELDVFTLLVFKSIFDTGHANSAAKALNVSAPKISRCLNALRLTFNDELFYRRQQGLKPT PLAESLYFAICQFTDSVYHLEQSALQIQNATSHVERPLQIAVSNGLLSFLAPQLSSPEAVDELGQVRLHKWQENSAELIH AGELDFGISLENAESKELTVSRLGGISMIYVVAAKQHPIWQVQTHISLEQICRHPFLCIELKGFNSRIDPLELFCQRQGI LLPSLEKVLDREEWYAHLLTMQSVAFCSGIDMHTVKHMPGLKLAPLPLTELHRLHDTIMPPQYYLVEKPRSHRRYSPAQC ELVVSSLLTALSQTYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38051; Mature: 37920
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYRAHRQGNPMSNPLLKQICELDVFTLLVFKSIFDTGHANSAAKALNVSAPKISRCLN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHH ALRLTFNDELFYRRQQGLKPTPLAESLYFAICQFTDSVYHLEQSALQIQNATSHVERPLQ HHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IAVSNGLLSFLAPQLSSPEAVDELGQVRLHKWQENSAELIHAGELDFGISLENAESKELT HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCCCHHHH VSRLGGISMIYVVAAKQHPIWQVQTHISLEQICRHPFLCIELKGFNSRIDPLELFCQRQG HHHHCCEEEEEEEEECCCCCEEHHHHCCHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCC ILLPSLEKVLDREEWYAHLLTMQSVAFCSGIDMHTVKHMPGLKLAPLPLTELHRLHDTIM CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEECCCCHHHHHHHHHHCC PPQYYLVEKPRSHRRYSPAQCELVVSSLLTALSQTYA CCCCEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAYRAHRQGNPMSNPLLKQICELDVFTLLVFKSIFDTGHANSAAKALNVSAPKISRCLN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHH ALRLTFNDELFYRRQQGLKPTPLAESLYFAICQFTDSVYHLEQSALQIQNATSHVERPLQ HHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IAVSNGLLSFLAPQLSSPEAVDELGQVRLHKWQENSAELIHAGELDFGISLENAESKELT HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCCCHHHH VSRLGGISMIYVVAAKQHPIWQVQTHISLEQICRHPFLCIELKGFNSRIDPLELFCQRQG HHHHCCEEEEEEEEECCCCCEEHHHHCCHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCC ILLPSLEKVLDREEWYAHLLTMQSVAFCSGIDMHTVKHMPGLKLAPLPLTELHRLHDTIM CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEECCCCHHHHHHHHHHCC PPQYYLVEKPRSHRRYSPAQCELVVSSLLTALSQTYA CCCCEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA