| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921205
Identifier: 117921205
GI number: 117921205
Start: 3303121
End: 3303363
Strand: Reverse
Name: 117921205
Synonym: Shewana3_2764
Alternate gene names: NA
Gene position: 3303363-3303121 (Counterclockwise)
Preceding gene: 117921206
Following gene: 117921204
Centisome position: 66.44
GC content: 43.21
Gene sequence:
>243_bases ATGTCATGGCAGGATAAGGCCCTTTGGCTTGAAAAAATCACTAAGCGCATGATGTTAATCGTCGGTGTCTTAGGTGTCAT AGTGATCTACGGCGGCTTCTTCTTTCTTCTCTTCACAGGTCGTTCGGTCGAGGTGATCCCGTGGTTTTTTCTGCTATCGC CTTGGATTTGTATTTACTTTGGTCTCACGCAGGTGCAGCAGGCCAATGTCATCAAGTGGTTTATTAAAAAAGTAAAAAAA TAA
Upstream 100 bases:
>100_bases AGTTGACATTTACTGGCTATCCTTCAACAATCGCACTCCACTTTTTTTACATAACTTTACAAATAGGGTTGACATTATAG TGATGGAGTTGATTATCTGA
Downstream 100 bases:
>100_bases GCCCGCAAAGGGCAGTGGCATATTTCGGTTTGTTTAGTTGGCAAACTTGGGGAATACAATGGGGTTAGGACGCTATTTAC CGTATCTGCTGAGTGCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSWQDKALWLEKITKRMMLIVGVLGVIVIYGGFFFLLFTGRSVEVIPWFFLLSPWICIYFGLTQVQQANVIKWFIKKVKK
Sequences:
>Translated_80_residues MSWQDKALWLEKITKRMMLIVGVLGVIVIYGGFFFLLFTGRSVEVIPWFFLLSPWICIYFGLTQVQQANVIKWFIKKVKK >Mature_79_residues SWQDKALWLEKITKRMMLIVGVLGVIVIYGGFFFLLFTGRSVEVIPWFFLLSPWICIYFGLTQVQQANVIKWFIKKVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9460; Mature: 9329
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWQDKALWLEKITKRMMLIVGVLGVIVIYGGFFFLLFTGRSVEVIPWFFLLSPWICIYF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GLTQVQQANVIKWFIKKVKK HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SWQDKALWLEKITKRMMLIVGVLGVIVIYGGFFFLLFTGRSVEVIPWFFLLSPWICIYF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GLTQVQQANVIKWFIKKVKK HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA