| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921178
Identifier: 117921178
GI number: 117921178
Start: 3268561
End: 3269721
Strand: Reverse
Name: 117921178
Synonym: Shewana3_2737
Alternate gene names: NA
Gene position: 3269721-3268561 (Counterclockwise)
Preceding gene: 117921181
Following gene: 117921177
Centisome position: 65.76
GC content: 47.98
Gene sequence:
>1161_bases ATGCGGATTGTATTAGGGCTGATTTTTTTCTTGTCAATGCAGGTGATGGCGCAGGCAGACAAGATGCAGATCCATTCTGA AATATTGAATGATGATATTAACTTACAAATCAAACTCCCCGATACCTATGGTCATTCCAGCGATTTTCGTTATCCCGTTT TAGTTGTCTTGGATGGCTCAACACAATTTGAGCATATTGCCGCGAATGTCGGCTTTTTAAGTAGCTATGCCATTATCCCT GAACTGATTGTCGTGGGTGTCAGCTCGAATAATCGCTTAAAGTCGTTTACGCCGACCCAATTAGAACAGTTCAAAGACCG AAGTGGTGGAGCAGAGAACTACAGGCAGTTTTTAGAAACAGAACTACTCAGCAGTTTGGGCCAGAAATATCGCATTGCCG ATTACCACATACTGTCGGGACACTCTATGGCTGGGCTATTCAGCAGTTATGTGGCTCTGACGCCTGACACTCGGTTTAAT GCGGCGATATCCATCAGCCCGAGCCTTTGGTGGGACAATAATTGGCTCGTACAGGAGTCCGCTAAGCTAGCCGTTGCCAA ACGGACAAAACCCATGCGCTGGTTTTTGAGTATCGCCAGTGAACCCAATGAGATGGCCAGCGCCTTTGCAGTCCAAATCA CCCAATTGCAAAATACCTTGGGAAATAGCCCGTCAGTGAAGCCTCCTTCAACCCAAATGTTGCAATGGTTTGATAAACGC TTCCCCGAAGAAACCCATGACAGCACCCCGCTTATCGGCAATGTTGCGGCATTAAAGACGCTGTTTGCGGGCTGGAATGC GGTGCCCGAAATCGCGGTGATGCCGCTAAAGGCATTAAAGCAGTTCTATCACCAGCAAACGGCGGTCTTCGGCTATGAGT TTCCGCTCTCTGCCCAGCAGTACAATGTCTATGGTCTCAAGGCCAGCTATGAGCAAAAAACGGCGTGGGGTGTGGAGATT TTACTGGAAGGGACAAAGGTGTTTCCTATGTCTGAGGTGCTCTGGGATAGCTTAGCAACCGCCTACGATCTTGATGGTCA AACCGCCCTTGCGATCGATGCTTCCAACAAAGCGGTGCTGTTGGCAAAGCAATCAGACTCAGTGTTTTTAAATGAAATCT TGAGTCAGGCCAAAAGTCTACAAGGCAAGACTCTCCAGTAG
Upstream 100 bases:
>100_bases TGTGGCTAATCAGGGCTTTCTGGTGGCGTAATTATGTTAATAAATTGATTGTCTTGATAAAAACCAGTAACTTAGCAGCC GTTGTTCATGGAGGTTAACG
Downstream 100 bases:
>100_bases CGCACGGTTTAAACTCTAACAGTATCGCAACATATTTGGACAAGCGCTCAGCATCTGGGTAATCTTGTCATCCTTTAAAT CATTGAGACCGTATCTTGCC
Product: putative esterase
Products: NA
Alternate protein names: Alpha/Beta Superfamily Hydrolase; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Alpha/Beta Fold Family Hydrolase-Like Protein; Ferric-Enterobactin Hydrolase; TPR Repeat-Containing Protein; Cysteine Synthase A; IroE Protein; Esterase Family Protein; Alpha/Beta Fold Family Hydrolase
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MRIVLGLIFFLSMQVMAQADKMQIHSEILNDDINLQIKLPDTYGHSSDFRYPVLVVLDGSTQFEHIAANVGFLSSYAIIP ELIVVGVSSNNRLKSFTPTQLEQFKDRSGGAENYRQFLETELLSSLGQKYRIADYHILSGHSMAGLFSSYVALTPDTRFN AAISISPSLWWDNNWLVQESAKLAVAKRTKPMRWFLSIASEPNEMASAFAVQITQLQNTLGNSPSVKPPSTQMLQWFDKR FPEETHDSTPLIGNVAALKTLFAGWNAVPEIAVMPLKALKQFYHQQTAVFGYEFPLSAQQYNVYGLKASYEQKTAWGVEI LLEGTKVFPMSEVLWDSLATAYDLDGQTALAIDASNKAVLLAKQSDSVFLNEILSQAKSLQGKTLQ
Sequences:
>Translated_386_residues MRIVLGLIFFLSMQVMAQADKMQIHSEILNDDINLQIKLPDTYGHSSDFRYPVLVVLDGSTQFEHIAANVGFLSSYAIIP ELIVVGVSSNNRLKSFTPTQLEQFKDRSGGAENYRQFLETELLSSLGQKYRIADYHILSGHSMAGLFSSYVALTPDTRFN AAISISPSLWWDNNWLVQESAKLAVAKRTKPMRWFLSIASEPNEMASAFAVQITQLQNTLGNSPSVKPPSTQMLQWFDKR FPEETHDSTPLIGNVAALKTLFAGWNAVPEIAVMPLKALKQFYHQQTAVFGYEFPLSAQQYNVYGLKASYEQKTAWGVEI LLEGTKVFPMSEVLWDSLATAYDLDGQTALAIDASNKAVLLAKQSDSVFLNEILSQAKSLQGKTLQ >Mature_386_residues MRIVLGLIFFLSMQVMAQADKMQIHSEILNDDINLQIKLPDTYGHSSDFRYPVLVVLDGSTQFEHIAANVGFLSSYAIIP ELIVVGVSSNNRLKSFTPTQLEQFKDRSGGAENYRQFLETELLSSLGQKYRIADYHILSGHSMAGLFSSYVALTPDTRFN AAISISPSLWWDNNWLVQESAKLAVAKRTKPMRWFLSIASEPNEMASAFAVQITQLQNTLGNSPSVKPPSTQMLQWFDKR FPEETHDSTPLIGNVAALKTLFAGWNAVPEIAVMPLKALKQFYHQQTAVFGYEFPLSAQQYNVYGLKASYEQKTAWGVEI LLEGTKVFPMSEVLWDSLATAYDLDGQTALAIDASNKAVLLAKQSDSVFLNEILSQAKSLQGKTLQ
Specific function: Unknown
COG id: COG2819
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43037; Mature: 43037
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVLGLIFFLSMQVMAQADKMQIHSEILNDDINLQIKLPDTYGHSSDFRYPVLVVLDGS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCC TQFEHIAANVGFLSSYAIIPELIVVGVSSNNRLKSFTPTQLEQFKDRSGGAENYRQFLET CCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH ELLSSLGQKYRIADYHILSGHSMAGLFSSYVALTPDTRFNAAISISPSLWWDNNWLVQES HHHHHCCCCEEEEEEEEECCCCHHHHHHHHEEECCCCCCCEEEEECCCEEECCCEEEECC AKLAVAKRTKPMRWFLSIASEPNEMASAFAVQITQLQNTLGNSPSVKPPSTQMLQWFDKR CHHHHHHCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH FPEETHDSTPLIGNVAALKTLFAGWNAVPEIAVMPLKALKQFYHQQTAVFGYEFPLSAQQ CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCE YNVYGLKASYEQKTAWGVEILLEGTKVFPMSEVLWDSLATAYDLDGQTALAIDASNKAVL EEEEEEECCCCCCHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEE LAKQSDSVFLNEILSQAKSLQGKTLQ EEECCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRIVLGLIFFLSMQVMAQADKMQIHSEILNDDINLQIKLPDTYGHSSDFRYPVLVVLDGS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCC TQFEHIAANVGFLSSYAIIPELIVVGVSSNNRLKSFTPTQLEQFKDRSGGAENYRQFLET CCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH ELLSSLGQKYRIADYHILSGHSMAGLFSSYVALTPDTRFNAAISISPSLWWDNNWLVQES HHHHHCCCCEEEEEEEEECCCCHHHHHHHHEEECCCCCCCEEEEECCCEEECCCEEEECC AKLAVAKRTKPMRWFLSIASEPNEMASAFAVQITQLQNTLGNSPSVKPPSTQMLQWFDKR CHHHHHHCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH FPEETHDSTPLIGNVAALKTLFAGWNAVPEIAVMPLKALKQFYHQQTAVFGYEFPLSAQQ CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCE YNVYGLKASYEQKTAWGVEILLEGTKVFPMSEVLWDSLATAYDLDGQTALAIDASNKAVL EEEEEEECCCCCCHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEE LAKQSDSVFLNEILSQAKSLQGKTLQ EEECCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA