| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921171
Identifier: 117921171
GI number: 117921171
Start: 3260288
End: 3260740
Strand: Direct
Name: 117921171
Synonym: Shewana3_2730
Alternate gene names: NA
Gene position: 3260288-3260740 (Clockwise)
Preceding gene: 117921170
Following gene: 117921176
Centisome position: 65.57
GC content: 43.49
Gene sequence:
>453_bases ATGCCTAATACGCCCATGACACTTGCCGACCTTAAATCAAGTATTGATACCGAGCGCGACTGTGGCTATGTACGGCTGTT CGAAGTCCATTCCTCAGCCCCAGAAAACGAGGTCAATTGGCTACCTAACCAGTTGGCAGTTCATGCATTGAATTCTTCAA TGCATTTGCATCAAATCACAGAAGCAGAGGCTAAGGAACTGTTTTGCTATCTGCTGACGCATGACATGGCTCACGGAATC GATTTGATGCAAGTGCAAAAAGCGGAGTCATTTTGGAATGCAATTATGGCTCGGTTAAGTGAGCCCGCATGCTTCTTTAC CAACACAAAAGACATGCACAAAAATAACTGGGCTGGCTCTTATGATCCGGCAACGAATTCAACGTTTGATAGCTGCTTAG TGTTTAAAGAAAAACAGAAAGCACTAATTATGGTCATAGAAGATGAAGATTAG
Upstream 100 bases:
>100_bases GAGCAATGTGAGGCACTCTAACAATGCGCTCAACTGCCGCTCACTGCGTTCGCTGGACAGTCAAACGCTACGCGTTTGCC TGCCCGTTAGCTTAATCGTT
Downstream 100 bases:
>100_bases GCATCACCTTTCGGTCAACGTGACAGCCCAAAGCTGCTTCGCAGCTCCGGCAGCACGTTACCTCCAACGTTAACCCATAG AGATTTTTATCCGAAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MPNTPMTLADLKSSIDTERDCGYVRLFEVHSSAPENEVNWLPNQLAVHALNSSMHLHQITEAEAKELFCYLLTHDMAHGI DLMQVQKAESFWNAIMARLSEPACFFTNTKDMHKNNWAGSYDPATNSTFDSCLVFKEKQKALIMVIEDED
Sequences:
>Translated_150_residues MPNTPMTLADLKSSIDTERDCGYVRLFEVHSSAPENEVNWLPNQLAVHALNSSMHLHQITEAEAKELFCYLLTHDMAHGI DLMQVQKAESFWNAIMARLSEPACFFTNTKDMHKNNWAGSYDPATNSTFDSCLVFKEKQKALIMVIEDED >Mature_149_residues PNTPMTLADLKSSIDTERDCGYVRLFEVHSSAPENEVNWLPNQLAVHALNSSMHLHQITEAEAKELFCYLLTHDMAHGID LMQVQKAESFWNAIMARLSEPACFFTNTKDMHKNNWAGSYDPATNSTFDSCLVFKEKQKALIMVIEDED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17068; Mature: 16937
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTPMTLADLKSSIDTERDCGYVRLFEVHSSAPENEVNWLPNQLAVHALNSSMHLHQIT CCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHH EAEAKELFCYLLTHDMAHGIDLMQVQKAESFWNAIMARLSEPACFFTNTKDMHKNNWAGS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC YDPATNSTFDSCLVFKEKQKALIMVIEDED CCCCCCCCHHHHHEEECCCCEEEEEEECCC >Mature Secondary Structure PNTPMTLADLKSSIDTERDCGYVRLFEVHSSAPENEVNWLPNQLAVHALNSSMHLHQIT CCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHH EAEAKELFCYLLTHDMAHGIDLMQVQKAESFWNAIMARLSEPACFFTNTKDMHKNNWAGS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC YDPATNSTFDSCLVFKEKQKALIMVIEDED CCCCCCCCHHHHHEEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA