Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921167

Identifier: 117921167

GI number: 117921167

Start: 3257285

End: 3258676

Strand: Direct

Name: 117921167

Synonym: Shewana3_2726

Alternate gene names: NA

Gene position: 3257285-3258676 (Clockwise)

Preceding gene: 117921166

Following gene: 117921168

Centisome position: 65.51

GC content: 37.28

Gene sequence:

>1392_bases
ATGCCTGAAAGATTAGAGCTCACAAAAAATGCACAATTCTATGTACCAAAAAACACAATTGATGATGCCATCATAAATGA
TATTCTCGGTGCAGCAGTCGACAATATGGATACGGACGCTCAGTTTGTTGTTGACCTTTTCAGAGCTGATAAGAGAGTTG
ATGAATCAGAGTTAGAATATAAATGCTCAGTTAGAGTATTCCCCTCTGTTAGACCTGTATATTTTATTAACGAAGAGCTC
GAAGATAGGGTGTACGCATTTATTATATTGATCGAATATCAGAATTATTTGGCAATTTTTAAGAAAAGTTGTGCAAATAT
ATCCGAGTTATTAAAAGAGCATTTCACCCTTGTTGATAGTAGAGATTTGACAAGTACATTTGGCGATAACGATGTTGAGT
TTCAAAAAATCGCTTTAAGAAATATGACTATTTCAGATAGAGCAATGAGAGCAAGGTCTTATGAAGCTGCAGACTTAAAG
GGACTTCTTTCGACACACTCTGCAGGAAGGTCAATTCCATTTTATTTAAAATTACGTCAAGGCGCTGTCACAAAAACAAT
TTCTGGAACTGGGCGATTAGTTGAGTCTTCTCAAAGAAAGTCCCTCGATGAGATAGCTGTTTGGGTGAGGGAGCAAGTTG
AGCTTATTGAAAACCCTTCGAATGATAATAACTTCCTAGATTCTTTTGCTAAGAAAGTAGAATTAAGTGATGTTCTAAAC
GCATGTGAACCTAATGCAATTCTTGTAGAAAGTACTCCGTTACAGGAAAGAATCGAAAGGGACGGACTGACTTTAAGATA
TAAGACAGCCGGAGGTGTAAATGTAGTTATTTCTTCTCGGATTAAGAACAAGCTTTTTGCAGGCCTTGAAAAAGTATATG
AACTTGACCCAGAGTGTAAGGTTGTTGGAAGAGAAAACTGCACGCGCCTTAGAAAGAATGAAAAAAGCTTAACATTGACA
TCGAAGGTATTGACAAAGTTTCGAGTAATCGAAAACGGAAAGGAAGTAACCTTACAAAAATTTATCGTGAAAAATGGTTA
CTATAGCGTCACATTCACTGACCCTAAATACATGTACTTTATGGGGGCATGCTTTGAAGACTCGTCAGGTATTTCTGAGA
TAAATAGTATCTTAGAGATAATGCACCCTAAACTTGAAATGCCCACAGTAACTTCCGAAAAAGGTGGTTTTACTAATACA
ACTACGGCGTTTGAGGTTAACTCAATGTTTGGTGTGGTTGAGAGCTTACATCAAAACGACGACTATATATTCTGTGATGA
TTTGGGTATTGAATGGGCTGATCACATTACATTAAACCGTGCCGAATCTAATATAAGCTTCATCCATTCTAAGCATGGCA
GTACCATGCACTTCAGCAAGCAACCTTCATGA

Upstream 100 bases:

>100_bases
ACTATGCGTTAGTTTTAGTGGTTAAGGTGGTATGCGGATGTTTTGGTATCGCGTGCCTCACACCTTAACAAGGCGTTAGC
ACTACAAGGAGGTACTGAGC

Downstream 100 bases:

>100_bases
TGTAGTTGGTCAAGGAATTAAAAATCTGGGAAATATGTATTTTACTAAAGAGCAGATGCTCGAAAGAATCAATGGTAAGT
TCTCGGATACATACTCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MPERLELTKNAQFYVPKNTIDDAIINDILGAAVDNMDTDAQFVVDLFRADKRVDESELEYKCSVRVFPSVRPVYFINEEL
EDRVYAFIILIEYQNYLAIFKKSCANISELLKEHFTLVDSRDLTSTFGDNDVEFQKIALRNMTISDRAMRARSYEAADLK
GLLSTHSAGRSIPFYLKLRQGAVTKTISGTGRLVESSQRKSLDEIAVWVREQVELIENPSNDNNFLDSFAKKVELSDVLN
ACEPNAILVESTPLQERIERDGLTLRYKTAGGVNVVISSRIKNKLFAGLEKVYELDPECKVVGRENCTRLRKNEKSLTLT
SKVLTKFRVIENGKEVTLQKFIVKNGYYSVTFTDPKYMYFMGACFEDSSGISEINSILEIMHPKLEMPTVTSEKGGFTNT
TTAFEVNSMFGVVESLHQNDDYIFCDDLGIEWADHITLNRAESNISFIHSKHGSTMHFSKQPS

Sequences:

>Translated_463_residues
MPERLELTKNAQFYVPKNTIDDAIINDILGAAVDNMDTDAQFVVDLFRADKRVDESELEYKCSVRVFPSVRPVYFINEEL
EDRVYAFIILIEYQNYLAIFKKSCANISELLKEHFTLVDSRDLTSTFGDNDVEFQKIALRNMTISDRAMRARSYEAADLK
GLLSTHSAGRSIPFYLKLRQGAVTKTISGTGRLVESSQRKSLDEIAVWVREQVELIENPSNDNNFLDSFAKKVELSDVLN
ACEPNAILVESTPLQERIERDGLTLRYKTAGGVNVVISSRIKNKLFAGLEKVYELDPECKVVGRENCTRLRKNEKSLTLT
SKVLTKFRVIENGKEVTLQKFIVKNGYYSVTFTDPKYMYFMGACFEDSSGISEINSILEIMHPKLEMPTVTSEKGGFTNT
TTAFEVNSMFGVVESLHQNDDYIFCDDLGIEWADHITLNRAESNISFIHSKHGSTMHFSKQPS
>Mature_462_residues
PERLELTKNAQFYVPKNTIDDAIINDILGAAVDNMDTDAQFVVDLFRADKRVDESELEYKCSVRVFPSVRPVYFINEELE
DRVYAFIILIEYQNYLAIFKKSCANISELLKEHFTLVDSRDLTSTFGDNDVEFQKIALRNMTISDRAMRARSYEAADLKG
LLSTHSAGRSIPFYLKLRQGAVTKTISGTGRLVESSQRKSLDEIAVWVREQVELIENPSNDNNFLDSFAKKVELSDVLNA
CEPNAILVESTPLQERIERDGLTLRYKTAGGVNVVISSRIKNKLFAGLEKVYELDPECKVVGRENCTRLRKNEKSLTLTS
KVLTKFRVIENGKEVTLQKFIVKNGYYSVTFTDPKYMYFMGACFEDSSGISEINSILEIMHPKLEMPTVTSEKGGFTNTT
TAFEVNSMFGVVESLHQNDDYIFCDDLGIEWADHITLNRAESNISFIHSKHGSTMHFSKQPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52557; Mature: 52426

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERLELTKNAQFYVPKNTIDDAIINDILGAAVDNMDTDAQFVVDLFRADKRVDESELEY
CCCCCEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCE
KCSVRVFPSVRPVYFINEELEDRVYAFIILIEYQNYLAIFKKSCANISELLKEHFTLVDS
EEEEEECCCCCEEEEECCHHHCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCC
RDLTSTFGDNDVEFQKIALRNMTISDRAMRARSYEAADLKGLLSTHSAGRSIPFYLKLRQ
CCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEC
GAVTKTISGTGRLVESSQRKSLDEIAVWVREQVELIENPSNDNNFLDSFAKKVELSDVLN
CCEEEEECCCCHHHHCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ACEPNAILVESTPLQERIERDGLTLRYKTAGGVNVVISSRIKNKLFAGLEKVYELDPECK
CCCCCEEEEECCCHHHHHHHCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCE
VVGRENCTRLRKNEKSLTLTSKVLTKFRVIENGKEVTLQKFIVKNGYYSVTFTDPKYMYF
EECCHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEEECCCEEEE
MGACFEDSSGISEINSILEIMHPKLEMPTVTSEKGGFTNTTTAFEVNSMFGVVESLHQND
EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCC
DYIFCDDLGIEWADHITLNRAESNISFIHSKHGSTMHFSKQPS
CEEEEECCCCCEECCEEEECCCCCEEEEECCCCCEEECCCCCC
>Mature Secondary Structure 
PERLELTKNAQFYVPKNTIDDAIINDILGAAVDNMDTDAQFVVDLFRADKRVDESELEY
CCCCEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCE
KCSVRVFPSVRPVYFINEELEDRVYAFIILIEYQNYLAIFKKSCANISELLKEHFTLVDS
EEEEEECCCCCEEEEECCHHHCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCC
RDLTSTFGDNDVEFQKIALRNMTISDRAMRARSYEAADLKGLLSTHSAGRSIPFYLKLRQ
CCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEC
GAVTKTISGTGRLVESSQRKSLDEIAVWVREQVELIENPSNDNNFLDSFAKKVELSDVLN
CCEEEEECCCCHHHHCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ACEPNAILVESTPLQERIERDGLTLRYKTAGGVNVVISSRIKNKLFAGLEKVYELDPECK
CCCCCEEEEECCCHHHHHHHCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCE
VVGRENCTRLRKNEKSLTLTSKVLTKFRVIENGKEVTLQKFIVKNGYYSVTFTDPKYMYF
EECCHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEEECCCEEEE
MGACFEDSSGISEINSILEIMHPKLEMPTVTSEKGGFTNTTTAFEVNSMFGVVESLHQND
EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCC
DYIFCDDLGIEWADHITLNRAESNISFIHSKHGSTMHFSKQPS
CEEEEECCCCCEECCEEEECCCCCEEEEECCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA