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The map label for this gene is ygaZ [H]

Identifier: 117921135

GI number: 117921135

Start: 3220649

End: 3221416

Strand: Direct

Name: ygaZ [H]

Synonym: Shewana3_2694

Alternate gene names: 117921135

Gene position: 3220649-3221416 (Clockwise)

Preceding gene: 117921134

Following gene: 117921136

Centisome position: 64.77

GC content: 53.39

Gene sequence:

>768_bases
GTGTCAGAGCCGTATATTGTCCACACCCATTCATCCAGTAAGACCAAGGCGTTTTTCAAAGGCACACTCGCCATGTTGCC
ACTCACTATTGCCGTGGTGCCTTGGGGGATCCTCGCAGGCTCGTTCGCGATTGAGGTCGGACTGACACCAATAGAAAGTC
AGGCCATGTCGGCGATTATTTTTGCGGGCGCCGCACAATTGGTCGCGCTTGGTATGGTTAAAGCGGGGATTGGTCTGTGG
AGCATTTTAATCACGACTTTGCTGATCACTTCACGTCACTTGCTGTACGCCATGGCGATGCGCAGCCAAATCAGCCCCTT
ACCACTAAAATGGCGCCTCACTCTGGGCTTTTTATTGACCGATGAACTCTTTGCCATCGCCAACCAAGGCAAGCTGCATA
AGTTCGATCCTTGGTACGCGCTGGGCGGAGGTCTGAGTTTTTACCTCGGCTGGAACCTCGCCACCCTGCTCGGCATTATT
GCCGGCAATGCTATCGATAACTTGGGCGAATTAGGACTCGACTTTGCCATTGCCGCGACTTTTATTGCCCTCGTAGTCCC
CACAGTGAAAAAGCCGTCCATCTTAGTCTGTGTGCTGGTTTCGCTCACCTTAGCTGTGGTATGCGCCGTACTGGATATTC
AGGCGGGACTGTTAATTGCCGCCCTCTCGGGAATGAGCGCTGGCGTGCTCTATGCCAAAGTCACGGGTGAAGATAAGCCA
GCCCCCAAAACCGACACGACTGCCACCCAAGCTGAGGAAACACTATGA

Upstream 100 bases:

>100_bases
CAAGGGGATTGGCCGCAATATTATCCAAGCTTAAACCCTGATTTTACGTTAGCCTTAACCCCTTATATTCTTTTTATCCC
AGCCGTAGTGAGGAGTCAGA

Downstream 100 bases:

>100_bases
TCTGGTTAATGATTTTTTCAATGGCGGCAGTGGTGTTTATCAGTCGGCATTTACTGCTCGAACCCAAACTGCCGCTAAGG
CTGAGTAAAAACACTCAGAC

Product: AzlC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MSEPYIVHTHSSSKTKAFFKGTLAMLPLTIAVVPWGILAGSFAIEVGLTPIESQAMSAIIFAGAAQLVALGMVKAGIGLW
SILITTLLITSRHLLYAMAMRSQISPLPLKWRLTLGFLLTDELFAIANQGKLHKFDPWYALGGGLSFYLGWNLATLLGII
AGNAIDNLGELGLDFAIAATFIALVVPTVKKPSILVCVLVSLTLAVVCAVLDIQAGLLIAALSGMSAGVLYAKVTGEDKP
APKTDTTATQAEETL

Sequences:

>Translated_255_residues
MSEPYIVHTHSSSKTKAFFKGTLAMLPLTIAVVPWGILAGSFAIEVGLTPIESQAMSAIIFAGAAQLVALGMVKAGIGLW
SILITTLLITSRHLLYAMAMRSQISPLPLKWRLTLGFLLTDELFAIANQGKLHKFDPWYALGGGLSFYLGWNLATLLGII
AGNAIDNLGELGLDFAIAATFIALVVPTVKKPSILVCVLVSLTLAVVCAVLDIQAGLLIAALSGMSAGVLYAKVTGEDKP
APKTDTTATQAEETL
>Mature_254_residues
SEPYIVHTHSSSKTKAFFKGTLAMLPLTIAVVPWGILAGSFAIEVGLTPIESQAMSAIIFAGAAQLVALGMVKAGIGLWS
ILITTLLITSRHLLYAMAMRSQISPLPLKWRLTLGFLLTDELFAIANQGKLHKFDPWYALGGGLSFYLGWNLATLLGIIA
GNAIDNLGELGLDFAIAATFIALVVPTVKKPSILVCVLVSLTLAVVCAVLDIQAGLLIAALSGMSAGVLYAKVTGEDKPA
PKTDTTATQAEETL

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=233, Percent_Identity=29.6137339055794, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 26837; Mature: 26706

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPYIVHTHSSSKTKAFFKGTLAMLPLTIAVVPWGILAGSFAIEVGLTPIESQAMSAII
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHH
FAGAAQLVALGMVKAGIGLWSILITTLLITSRHLLYAMAMRSQISPLPLKWRLTLGFLLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHH
DELFAIANQGKLHKFDPWYALGGGLSFYLGWNLATLLGIIAGNAIDNLGELGLDFAIAAT
HHHHHHHCCCCCEECCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIALVVPTVKKPSILVCVLVSLTLAVVCAVLDIQAGLLIAALSGMSAGVLYAKVTGEDKP
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
APKTDTTATQAEETL
CCCCCCCHHHHHHCC
>Mature Secondary Structure 
SEPYIVHTHSSSKTKAFFKGTLAMLPLTIAVVPWGILAGSFAIEVGLTPIESQAMSAII
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHH
FAGAAQLVALGMVKAGIGLWSILITTLLITSRHLLYAMAMRSQISPLPLKWRLTLGFLLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHH
DELFAIANQGKLHKFDPWYALGGGLSFYLGWNLATLLGIIAGNAIDNLGELGLDFAIAAT
HHHHHHHCCCCCEECCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIALVVPTVKKPSILVCVLVSLTLAVVCAVLDIQAGLLIAALSGMSAGVLYAKVTGEDKP
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
APKTDTTATQAEETL
CCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]