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The map label for this gene is nrfB [C]

Identifier: 117921118

GI number: 117921118

Start: 3200156

End: 3201145

Strand: Direct

Name: nrfB [C]

Synonym: Shewana3_2677

Alternate gene names: 117921118

Gene position: 3200156-3201145 (Clockwise)

Preceding gene: 117921117

Following gene: 117921119

Centisome position: 64.36

GC content: 49.7

Gene sequence:

>990_bases
ATGAAGAACAGCCACAAAATGAAAAACCTACTGCCGGCATTGATGATGTCTGCGGTCATGGCATTTGCCATCGCACCGAG
CGCTCACGCCTCCAAGTGGGATGAAAAAATGACGCCTGAGCAAGTCGAAGCGACCTTAGATAAGAAGTTTGCCGAAGGCA
ACTACTCACCCAAAGGCGCCGACTCTTGCTTGATGTGCCATAAAAAATCCGAAAAAGTTATGGACCTTTTCAAAGGTGTC
CACGGCGCCATTGACTCCACTAAGAGCCCGATGGCTGGCCTACAATGTGAGGCTTGCCACGGACCTATGGGTCAACACAA
CAAGGGCGGCAACGAGCCGATGATCACTTTTGGTAAGCAATCGACCTTAAGTGCCGACAAGCAAAACAGCGTGTGTATGA
GCTGTCACCAAGACGATAAGCGTATGTCTTGGAATGGCGGTCACCATGACAACGCCGATGTTGCTTGTGCCTCGTGCCAC
CAAGTACACGTCGCGAAAGACCCTGTGTTATCTAAAAACACTGAGATGGACGTCTGTACAAGCTGCCACACTAAGCAAAA
AGCGGATATGAACAAACGCTCAAGTCACCCACTCAAATGGGCACAAATGACCTGTAGCGACTGTCACAATCCCCATGGGA
GCATGACAGATTCTGATCTGAACAAGCCAAGCATTAACGAAACTTGTTATTCCTGTCACGCCGAGAAGCGCGGCCCAAAA
CTCTGGGAGCATGCACCCGTCACTGAGAGTTGTGTTACTTGCCACAATCCTCACGGTAGTGTGAATGATGCCATGCTGAA
AACCCGTGCACCGCAGTTATGTCAGCAATGTCACGCCAGCGATGGCCATGCCAGCAATGCCTATTTAGGTAACACTGGTT
TAGGTTCAAATGTCGGTGACAATGCCTTTACGGGTGGAAGAAGCTGCTTAAATTGCCATAGTCAGGTCCATGGTTCTAAC
CATCCATCTGGCAAGCTATTACAGCGCTAA

Upstream 100 bases:

>100_bases
CAGTTGCAGATCACACTCAAGTGAAAATGTAATTTGCCCAAGCAGGGGGAGTTCGCTCCCCCTTTCTTGAATTTTGTTGG
GACAAATTGGGAAGCCTATT

Downstream 100 bases:

>100_bases
GGAGACGAGAAGATGAAATTCAAACTCAATTTGATCACTCTAGCGTTATTAGCCAACACAGGTTTCGCCGTAGCTGCCGA
TGGTTATGGTCTCGCCAATG

Product: cytochrome C family protein

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: Decaheme C-Type Cytochrome DmsE Family; Decaheme Cytochrome C MtrA; Multiheme Cytochrome; Decaheme Cytochrome C; Nitrate/TMAO Reductase; Multiheme C-Type Cytochrome; Doubled CXXCH Domain-Containing Protein; Cytochrome; Lipoprotein Cytochrome C; Decaheme Cytochrome C MtrD; Multiheme Cytochrome Family Protein; Double CXXCH Motif-Containing Protein; Cytochrome C; Cytochrome C-Type Protein NrfB

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKNSHKMKNLLPALMMSAVMAFAIAPSAHASKWDEKMTPEQVEATLDKKFAEGNYSPKGADSCLMCHKKSEKVMDLFKGV
HGAIDSTKSPMAGLQCEACHGPMGQHNKGGNEPMITFGKQSTLSADKQNSVCMSCHQDDKRMSWNGGHHDNADVACASCH
QVHVAKDPVLSKNTEMDVCTSCHTKQKADMNKRSSHPLKWAQMTCSDCHNPHGSMTDSDLNKPSINETCYSCHAEKRGPK
LWEHAPVTESCVTCHNPHGSVNDAMLKTRAPQLCQQCHASDGHASNAYLGNTGLGSNVGDNAFTGGRSCLNCHSQVHGSN
HPSGKLLQR

Sequences:

>Translated_329_residues
MKNSHKMKNLLPALMMSAVMAFAIAPSAHASKWDEKMTPEQVEATLDKKFAEGNYSPKGADSCLMCHKKSEKVMDLFKGV
HGAIDSTKSPMAGLQCEACHGPMGQHNKGGNEPMITFGKQSTLSADKQNSVCMSCHQDDKRMSWNGGHHDNADVACASCH
QVHVAKDPVLSKNTEMDVCTSCHTKQKADMNKRSSHPLKWAQMTCSDCHNPHGSMTDSDLNKPSINETCYSCHAEKRGPK
LWEHAPVTESCVTCHNPHGSVNDAMLKTRAPQLCQQCHASDGHASNAYLGNTGLGSNVGDNAFTGGRSCLNCHSQVHGSN
HPSGKLLQR
>Mature_329_residues
MKNSHKMKNLLPALMMSAVMAFAIAPSAHASKWDEKMTPEQVEATLDKKFAEGNYSPKGADSCLMCHKKSEKVMDLFKGV
HGAIDSTKSPMAGLQCEACHGPMGQHNKGGNEPMITFGKQSTLSADKQNSVCMSCHQDDKRMSWNGGHHDNADVACASCH
QVHVAKDPVLSKNTEMDVCTSCHTKQKADMNKRSSHPLKWAQMTCSDCHNPHGSMTDSDLNKPSINETCYSCHAEKRGPK
LWEHAPVTESCVTCHNPHGSVNDAMLKTRAPQLCQQCHASDGHASNAYLGNTGLGSNVGDNAFTGGRSCLNCHSQVHGSN
HPSGKLLQR

Specific function: Plays A Role In Nitrite Reduction. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082366, Length=196, Percent_Identity=31.6326530612245, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35651; Mature: 35651

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
11.6 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
11.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSHKMKNLLPALMMSAVMAFAIAPSAHASKWDEKMTPEQVEATLDKKFAEGNYSPKGA
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
DSCLMCHKKSEKVMDLFKGVHGAIDSTKSPMAGLQCEACHGPMGQHNKGGNEPMITFGKQ
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCC
STLSADKQNSVCMSCHQDDKRMSWNGGHHDNADVACASCHQVHVAKDPVLSKNTEMDVCT
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHEEEECCCCCCCCCCCHHHHH
SCHTKQKADMNKRSSHPLKWAQMTCSDCHNPHGSMTDSDLNKPSINETCYSCHAEKRGPK
HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
LWEHAPVTESCVTCHNPHGSVNDAMLKTRAPQLCQQCHASDGHASNAYLGNTGLGSNVGD
CHHCCCCCHHHHCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCC
NAFTGGRSCLNCHSQVHGSNHPSGKLLQR
CCCCCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKNSHKMKNLLPALMMSAVMAFAIAPSAHASKWDEKMTPEQVEATLDKKFAEGNYSPKGA
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
DSCLMCHKKSEKVMDLFKGVHGAIDSTKSPMAGLQCEACHGPMGQHNKGGNEPMITFGKQ
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCC
STLSADKQNSVCMSCHQDDKRMSWNGGHHDNADVACASCHQVHVAKDPVLSKNTEMDVCT
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHEEEECCCCCCCCCCCHHHHH
SCHTKQKADMNKRSSHPLKWAQMTCSDCHNPHGSMTDSDLNKPSINETCYSCHAEKRGPK
HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
LWEHAPVTESCVTCHNPHGSVNDAMLKTRAPQLCQQCHASDGHASNAYLGNTGLGSNVGD
CHHCCCCCHHHHCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCC
NAFTGGRSCLNCHSQVHGSNHPSGKLLQR
CCCCCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA