Click here to switch to the map view.

The map label for this gene is 117921082

Identifier: 117921082

GI number: 117921082

Start: 3154100

End: 3155380

Strand: Reverse

Name: 117921082

Synonym: Shewana3_2641

Alternate gene names: NA

Gene position: 3155380-3154100 (Counterclockwise)

Preceding gene: 117921083

Following gene: 117921079

Centisome position: 63.46

GC content: 44.18

Gene sequence:

>1281_bases
GTGGTACACTTGGTGGTACATTTCATGGGAAGTCATCTCGATAAATCTCCAGCTTATTTGTTCAAGTCACGACATGGCAT
TTGGTACGCAAGAATAGTTATTCCCGAAGCAATGCAGTCCACTCTTGGTAAGCGCGAACTTAGAAAGTCTTTAGAGACTA
GAGAGCGCTTTGAAGCCGTGAGAAAGTCTTGGCAAGTTCTAATGCAGTTAAAAAGCATTATTGAGGGACACGTTCAGAAT
GATTCTGAATTTTCTCAAGTAGTTGCAATTACAAGCGCAGTTCACCAAGTTGCACCGATGGCGGCAGCAATCACCTCAAG
TCCAATTCAAAGCCCAAAACCTAAACTTCCCAAATTGAGCCAAGTATCTGAAGAGTTCTGTCAGGAAAAGCTTAAGCAAG
GTGCTTGGTCAGCGGGTAGTGAGAAAGTTAACCGTCAATCATTTAAAGACTTAATAAACCTCATTGGTGATTTGCATCTG
GATGAGTTCACATTGCCCAAAGCTTTGGAGTATAAGCGGCATTTCTCTTCAAAGTCTGAGTTGTCAGTTGCTACGGTAAA
CAAGCGACTAACCAGAGTGTCAGCACTCATGCAATGGGCTTCAATTCATTACGGTACAAATAATCCGATGACAGGATTGA
GCATAAAGGTCTCTGAAAGGGTGAAAGCTTCAAAGGCTAGGGATGCTCTGAGTGATAACCAAATCAAGCAGTTATTTAGA
GAAATTCCTCCTGTTACCGAAATCAATTTACCTTATAGAGCTTGGCTGCCTAGATTGGCTGCATACACAGGGGCGAGGAT
AGGGGAGCTGGCTCAGCTCTACTTGGATGACCTTCAAGTGGTTGATAATCATCCTTGCATACTCATCAGGGCAACCCACA
AAGACCAATCTATAAAGACTGCTTCAAGTGAGCGCGTTATCCCAATTCACCCTGAGTTAATAGCTATGGGCTTCCTGAAG
TTTGTTGAAAAACAGCAGGAAAAGGGGGGTGAGCGCCTGTTCCCAGAGCTGAGGAAATTGCCAGCTAGAGGCTATTCACA
TCAAGTCTCAAAGTGGTTTAGTACCTTCAAGGCCAAGTTGGGCTGGGGTGAAAGGGAGACTTTGCACGGTATTAGGCATG
CGGTAGCTACCCAGCTAAAGCATAAGGAGTTTAGCTCGGACATGGTTGCAGGATTGCTTGGACATTCTCATGGCTCAATC
ACCTTCGACAGGTACGGTAAGGATTATAAGATTGAAAATATGCTTAAACTTATTAACGCCTTGGGTTGGTGCCAGAAATG
A

Upstream 100 bases:

>100_bases
AGCAAGCGACTCGTGTGCCGGGGTGTCGGCTCTAGGGGAACCTCCAAATCTCCTCATAAATCAATCTCTTATATCAGCAG
TTCAGTGAAATTTCATCCGA

Downstream 100 bases:

>100_bases
CATGCGCAACTAATGGGAATTAATAATAAATGTGAGCCTTTATCAGGATACTTACAAATCCATCCTTATCTTCAAATTTG
AACTCGAAAGCATTCCTTAA

Product: phage integrase family protein

Products: NA

Alternate protein names: Integrase; Phage-Related Integrase; Phage Integrase; Phage Integrase Family Protein; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase; Integrase/Resolvase Recombinase Protein; Integrase Domain-Containing Protein; Integrase Domain Protein SAM Domain Protein; DNA-Binfing Protein

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MVHLVVHFMGSHLDKSPAYLFKSRHGIWYARIVIPEAMQSTLGKRELRKSLETRERFEAVRKSWQVLMQLKSIIEGHVQN
DSEFSQVVAITSAVHQVAPMAAAITSSPIQSPKPKLPKLSQVSEEFCQEKLKQGAWSAGSEKVNRQSFKDLINLIGDLHL
DEFTLPKALEYKRHFSSKSELSVATVNKRLTRVSALMQWASIHYGTNNPMTGLSIKVSERVKASKARDALSDNQIKQLFR
EIPPVTEINLPYRAWLPRLAAYTGARIGELAQLYLDDLQVVDNHPCILIRATHKDQSIKTASSERVIPIHPELIAMGFLK
FVEKQQEKGGERLFPELRKLPARGYSHQVSKWFSTFKAKLGWGERETLHGIRHAVATQLKHKEFSSDMVAGLLGHSHGSI
TFDRYGKDYKIENMLKLINALGWCQK

Sequences:

>Translated_426_residues
MVHLVVHFMGSHLDKSPAYLFKSRHGIWYARIVIPEAMQSTLGKRELRKSLETRERFEAVRKSWQVLMQLKSIIEGHVQN
DSEFSQVVAITSAVHQVAPMAAAITSSPIQSPKPKLPKLSQVSEEFCQEKLKQGAWSAGSEKVNRQSFKDLINLIGDLHL
DEFTLPKALEYKRHFSSKSELSVATVNKRLTRVSALMQWASIHYGTNNPMTGLSIKVSERVKASKARDALSDNQIKQLFR
EIPPVTEINLPYRAWLPRLAAYTGARIGELAQLYLDDLQVVDNHPCILIRATHKDQSIKTASSERVIPIHPELIAMGFLK
FVEKQQEKGGERLFPELRKLPARGYSHQVSKWFSTFKAKLGWGERETLHGIRHAVATQLKHKEFSSDMVAGLLGHSHGSI
TFDRYGKDYKIENMLKLINALGWCQK
>Mature_426_residues
MVHLVVHFMGSHLDKSPAYLFKSRHGIWYARIVIPEAMQSTLGKRELRKSLETRERFEAVRKSWQVLMQLKSIIEGHVQN
DSEFSQVVAITSAVHQVAPMAAAITSSPIQSPKPKLPKLSQVSEEFCQEKLKQGAWSAGSEKVNRQSFKDLINLIGDLHL
DEFTLPKALEYKRHFSSKSELSVATVNKRLTRVSALMQWASIHYGTNNPMTGLSIKVSERVKASKARDALSDNQIKQLFR
EIPPVTEINLPYRAWLPRLAAYTGARIGELAQLYLDDLQVVDNHPCILIRATHKDQSIKTASSERVIPIHPELIAMGFLK
FVEKQQEKGGERLFPELRKLPARGYSHQVSKWFSTFKAKLGWGERETLHGIRHAVATQLKHKEFSSDMVAGLLGHSHGSI
TFDRYGKDYKIENMLKLINALGWCQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48336; Mature: 48336

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHLVVHFMGSHLDKSPAYLFKSRHGIWYARIVIPEAMQSTLGKRELRKSLETRERFEAV
CCEEHEEHHHCCCCCCHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
RKSWQVLMQLKSIIEGHVQNDSEFSQVVAITSAVHQVAPMAAAITSSPIQSPKPKLPKLS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
QVSEEFCQEKLKQGAWSAGSEKVNRQSFKDLINLIGDLHLDEFTLPKALEYKRHFSSKSE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC
LSVATVNKRLTRVSALMQWASIHYGTNNPMTGLSIKVSERVKASKARDALSDNQIKQLFR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHH
EIPPVTEINLPYRAWLPRLAAYTGARIGELAQLYLDDLQVVDNHPCILIRATHKDQSIKT
HCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHC
ASSERVIPIHPELIAMGFLKFVEKQQEKGGERLFPELRKLPARGYSHQVSKWFSTFKAKL
CCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GWGERETLHGIRHAVATQLKHKEFSSDMVAGLLGHSHGSITFDRYGKDYKIENMLKLINA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCHHHHHHHHHH
LGWCQK
HHCCCC
>Mature Secondary Structure
MVHLVVHFMGSHLDKSPAYLFKSRHGIWYARIVIPEAMQSTLGKRELRKSLETRERFEAV
CCEEHEEHHHCCCCCCHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
RKSWQVLMQLKSIIEGHVQNDSEFSQVVAITSAVHQVAPMAAAITSSPIQSPKPKLPKLS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
QVSEEFCQEKLKQGAWSAGSEKVNRQSFKDLINLIGDLHLDEFTLPKALEYKRHFSSKSE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC
LSVATVNKRLTRVSALMQWASIHYGTNNPMTGLSIKVSERVKASKARDALSDNQIKQLFR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHH
EIPPVTEINLPYRAWLPRLAAYTGARIGELAQLYLDDLQVVDNHPCILIRATHKDQSIKT
HCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHC
ASSERVIPIHPELIAMGFLKFVEKQQEKGGERLFPELRKLPARGYSHQVSKWFSTFKAKL
CCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GWGERETLHGIRHAVATQLKHKEFSSDMVAGLLGHSHGSITFDRYGKDYKIENMLKLINA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCHHHHHHHHHH
LGWCQK
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA