| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921045
Identifier: 117921045
GI number: 117921045
Start: 3108510
End: 3109205
Strand: Reverse
Name: 117921045
Synonym: Shewana3_2604
Alternate gene names: NA
Gene position: 3109205-3108510 (Counterclockwise)
Preceding gene: 117921046
Following gene: 117921044
Centisome position: 62.53
GC content: 48.71
Gene sequence:
>696_bases ATGAATCCTCTTTTAAATGCCTTAAATCTGAACCGTAGCAGTGTTGCCGATGCCTATGGCCTGAACAGCAAGAAGACGGA CACGAGTAAGACTGACGCAAGTAAGACAAAGCCCAGCACGGATGCCAACTCATCCACCAAGGATACGCCTAAAACTGAAG CGAAACCGAGTGATGAGATTGCCTTGTCACCCCGTGCGCTTCGGGCACAAAAAATCCAAGCCATGTCGAAGGACTTTTTT GCCGATGGCCAGTTTAGTGTGTCAGATATTCCGGCCCTAGTGTCTCGGCTGCAAAAGGACGGCATTTTGTCCGATGCACA GGTTGAGCGACTGTCACAAAACGGCATTAATTTGCCGAGCCAAAAGCCGAGCAAGCAATCCCTGCAAGACTTTATCGATG ACGAGCTGAAGTCCTTAGCGGAAAAGTCACCCAACAGTCCGATGATCAACACCTTAGTCGATGCTAAGAATGTATTGTCG AATATGGATGATGCGCAATCCCCTGTGCTGGCACAAAAAGCCACCAAGGTATTTGGCCAGTTAACCGATTATCTAAATAG CAATCCAACACTGAGTGACAGCCAAAAGCAGTTATGGCAGGGGCTTAAATCGACCATGCAAGTGGCTTCCTCCATGGGGA TGCAGCAATCGGCATCGGGGCAACTGAGTAGTTATCTTGCCTTAGCCAAGCGTTAA
Upstream 100 bases:
>100_bases GTGCTCGCGAAACGAATAATAATTTAGGCAAGTGACTGTTTGATTGGCTTATTTTTTGCTTTAACCCCATCACACAGTGT TAGATGCCGAATTATTGACG
Downstream 100 bases:
>100_bases CCCTGTCTGAATGCAAACCTTGGCTAAGGGCAAACGCCGAGCTAAGGACTCCTTTTATTCCAAGGACTTTTAATTCTAAG GATTTTTTATTACAAGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MNPLLNALNLNRSSVADAYGLNSKKTDTSKTDASKTKPSTDANSSTKDTPKTEAKPSDEIALSPRALRAQKIQAMSKDFF ADGQFSVSDIPALVSRLQKDGILSDAQVERLSQNGINLPSQKPSKQSLQDFIDDELKSLAEKSPNSPMINTLVDAKNVLS NMDDAQSPVLAQKATKVFGQLTDYLNSNPTLSDSQKQLWQGLKSTMQVASSMGMQQSASGQLSSYLALAKR
Sequences:
>Translated_231_residues MNPLLNALNLNRSSVADAYGLNSKKTDTSKTDASKTKPSTDANSSTKDTPKTEAKPSDEIALSPRALRAQKIQAMSKDFF ADGQFSVSDIPALVSRLQKDGILSDAQVERLSQNGINLPSQKPSKQSLQDFIDDELKSLAEKSPNSPMINTLVDAKNVLS NMDDAQSPVLAQKATKVFGQLTDYLNSNPTLSDSQKQLWQGLKSTMQVASSMGMQQSASGQLSSYLALAKR >Mature_231_residues MNPLLNALNLNRSSVADAYGLNSKKTDTSKTDASKTKPSTDANSSTKDTPKTEAKPSDEIALSPRALRAQKIQAMSKDFF ADGQFSVSDIPALVSRLQKDGILSDAQVERLSQNGINLPSQKPSKQSLQDFIDDELKSLAEKSPNSPMINTLVDAKNVLS NMDDAQSPVLAQKATKVFGQLTDYLNSNPTLSDSQKQLWQGLKSTMQVASSMGMQQSASGQLSSYLALAKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24928; Mature: 24928
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLLNALNLNRSSVADAYGLNSKKTDTSKTDASKTKPSTDANSSTKDTPKTEAKPSDEI CCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE ALSPRALRAQKIQAMSKDFFADGQFSVSDIPALVSRLQKDGILSDAQVERLSQNGINLPS ECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC QKPSKQSLQDFIDDELKSLAEKSPNSPMINTLVDAKNVLSNMDDAQSPVLAQKATKVFGQ CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHH LTDYLNSNPTLSDSQKQLWQGLKSTMQVASSMGMQQSASGQLSSYLALAKR HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPLLNALNLNRSSVADAYGLNSKKTDTSKTDASKTKPSTDANSSTKDTPKTEAKPSDEI CCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE ALSPRALRAQKIQAMSKDFFADGQFSVSDIPALVSRLQKDGILSDAQVERLSQNGINLPS ECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC QKPSKQSLQDFIDDELKSLAEKSPNSPMINTLVDAKNVLSNMDDAQSPVLAQKATKVFGQ CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHH LTDYLNSNPTLSDSQKQLWQGLKSTMQVASSMGMQQSASGQLSSYLALAKR HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA