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The map label for this gene is ybaR [H]

Identifier: 117921009

GI number: 117921009

Start: 3071714

End: 3073273

Strand: Direct

Name: ybaR [H]

Synonym: Shewana3_2568

Alternate gene names: 117921009

Gene position: 3071714-3073273 (Clockwise)

Preceding gene: 117921008

Following gene: 117921013

Centisome position: 61.78

GC content: 48.08

Gene sequence:

>1560_bases
ATGTTCGATCTTTTTCGCCACAAAACATCTAGTCACAAAGCCGATATTCTCTCGGGGCTGACGGTCGCACTTGCGCTTAT
CCCAGAAGCCGTTGCCTTTGCCTTTGTCGCCAATGTCGAACCTATGGTCGGCCTCTATGCGGCCTTTATTATGGGATTGG
TTACCGCACTGATTGGCGGCCGCCCAGGCATGATTTCGGGCGCAACAGGGGCCATGGCCGTGGTGATGGTGTCCTTAGTG
GTTGAACATGGCGTGCAATACTTATTCGCCGCTGTGGTGCTGGCGGGGTTAATCCAAATCAGCGCTGGGATATTTAAACT
GGGTAAGTTTATCCGTATTGTGCCCTATCCTGTGATGATAGGTTTTGTGAATGGCCTTGCCATTGTGATTTTCTTGGCTC
AGCTCGGGCAATTTAAAGTCAAAAATGCCGCAGGGGAATTAGTCTGGCTACCACAAGAGCCTTTAATGCTGATGTTAGGG
TTAGTCGCACTGACCATGGCAATTATTTACTTTCTCCCCAAACTGACTACAGCGGTCCCCTCATCGTTAGTTGCGATTTT
AAGCGTGACCGCCATCGTGGTGGGTTTTGACTTAGAAACCCGTAATGTGTTGGATTTTCTTAAAACCATGAGTGGTGACG
AACACGCCACAATCGCAGGCTCACTCCCAAGCTTTGCGATCCCACAGGTGCCGTTTAACCTTGAGACACTCTACATTATT
CTGCCCTATTCCTTTATTTTAGCCGCCGTCGGATTAATCGAATCCCTGTTAACCTTGACGGTTATCGATGAGATGACTAA
TACCCGAGGACGCAGCAATAAAGAATGTATAGGTCAAGGCGTGGGCAACATCACCAGCGGCTTTTTTGGGGCTATGGGCG
GCTGCGCTATGATTGGTCAATCGATGATTAACATTAACTCGGGTGGACGCGGCAGATTATCCGGTATTACCGCAGCTATC
GGTTTATTGACTTTTATCCTGTTTGGCGCATCTTTTATCGAAATCATTCCGCTAGCCGCTTTGGTTGGCGTGATGTTTAT
CGTGGTGCTCGGCACATTCGAATGGGCAAGCTTTAAGTTTATGGGCAAAATCCCTAAACATGATGCCTTTGTGATTGTGC
TCGTGACTACTGTGACCGTTTTTACCGATCTCGCCTTTGCCGTCTTTGTCGGCGTCGTGGTATCGGCGCTTGTGTTTGCA
TGGCAACATGCCAAGCACATCAGCGTAAAAGTAACCTCAAATAGCCTTGGCTGGAAAGTCTATGAGCTGAACGGCCCATT
GTTTTTTGGCTCAGTGGCCAGTTTCCTCGAATTATTTGATGCCTCGCAGGATCCCCAGGATGTCGTTATCGATTTCAAAC
ATTCACGCGTAGCCGATCATTCAGCATTAGAAGCCATAGATACCCTTGCCGAACGTTATGTTGCGCTGGGGAAAAAGCTG
CATTTGGTGCATTTAAGTGCCGATTGTAAAGCCTTACTTCACAAAGCAGGCGATCTGGTTGAAGTGAATTTGCTAGACGA
TCCCCACTATAAAGTTGCGGACGATAAGCTCGATTCTTAA

Upstream 100 bases:

>100_bases
TATTTTCAGCAAATTAAGCCATATTTAAGGTTTAGCTCAATCGGCTTTTTTGTTAGTATGCGCGGCTATTTTGCCAACAC
AAGTCATTAACAGAGGTTTC

Downstream 100 bases:

>100_bases
ATAAGCACCTAATAAGGCTGCAATAACTGCTAACCCACGATCTGAAGGCTAACTTCGCAAAAGATTGTGGGTTTATTATT
GCTGGCAAAACAAGACTTGA

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MFDLFRHKTSSHKADILSGLTVALALIPEAVAFAFVANVEPMVGLYAAFIMGLVTALIGGRPGMISGATGAMAVVMVSLV
VEHGVQYLFAAVVLAGLIQISAGIFKLGKFIRIVPYPVMIGFVNGLAIVIFLAQLGQFKVKNAAGELVWLPQEPLMLMLG
LVALTMAIIYFLPKLTTAVPSSLVAILSVTAIVVGFDLETRNVLDFLKTMSGDEHATIAGSLPSFAIPQVPFNLETLYII
LPYSFILAAVGLIESLLTLTVIDEMTNTRGRSNKECIGQGVGNITSGFFGAMGGCAMIGQSMININSGGRGRLSGITAAI
GLLTFILFGASFIEIIPLAALVGVMFIVVLGTFEWASFKFMGKIPKHDAFVIVLVTTVTVFTDLAFAVFVGVVVSALVFA
WQHAKHISVKVTSNSLGWKVYELNGPLFFGSVASFLELFDASQDPQDVVIDFKHSRVADHSALEAIDTLAERYVALGKKL
HLVHLSADCKALLHKAGDLVEVNLLDDPHYKVADDKLDS

Sequences:

>Translated_519_residues
MFDLFRHKTSSHKADILSGLTVALALIPEAVAFAFVANVEPMVGLYAAFIMGLVTALIGGRPGMISGATGAMAVVMVSLV
VEHGVQYLFAAVVLAGLIQISAGIFKLGKFIRIVPYPVMIGFVNGLAIVIFLAQLGQFKVKNAAGELVWLPQEPLMLMLG
LVALTMAIIYFLPKLTTAVPSSLVAILSVTAIVVGFDLETRNVLDFLKTMSGDEHATIAGSLPSFAIPQVPFNLETLYII
LPYSFILAAVGLIESLLTLTVIDEMTNTRGRSNKECIGQGVGNITSGFFGAMGGCAMIGQSMININSGGRGRLSGITAAI
GLLTFILFGASFIEIIPLAALVGVMFIVVLGTFEWASFKFMGKIPKHDAFVIVLVTTVTVFTDLAFAVFVGVVVSALVFA
WQHAKHISVKVTSNSLGWKVYELNGPLFFGSVASFLELFDASQDPQDVVIDFKHSRVADHSALEAIDTLAERYVALGKKL
HLVHLSADCKALLHKAGDLVEVNLLDDPHYKVADDKLDS
>Mature_519_residues
MFDLFRHKTSSHKADILSGLTVALALIPEAVAFAFVANVEPMVGLYAAFIMGLVTALIGGRPGMISGATGAMAVVMVSLV
VEHGVQYLFAAVVLAGLIQISAGIFKLGKFIRIVPYPVMIGFVNGLAIVIFLAQLGQFKVKNAAGELVWLPQEPLMLMLG
LVALTMAIIYFLPKLTTAVPSSLVAILSVTAIVVGFDLETRNVLDFLKTMSGDEHATIAGSLPSFAIPQVPFNLETLYII
LPYSFILAAVGLIESLLTLTVIDEMTNTRGRSNKECIGQGVGNITSGFFGAMGGCAMIGQSMININSGGRGRLSGITAAI
GLLTFILFGASFIEIIPLAALVGVMFIVVLGTFEWASFKFMGKIPKHDAFVIVLVTTVTVFTDLAFAVFVGVVVSALVFA
WQHAKHISVKVTSNSLGWKVYELNGPLFFGSVASFLELFDASQDPQDVVIDFKHSRVADHSALEAIDTLAERYVALGKKL
HLVHLSADCKALLHKAGDLVEVNLLDDPHYKVADDKLDS

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=567, Percent_Identity=22.5749559082892, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI262206075, Length=567, Percent_Identity=22.5749559082892, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI262206069, Length=567, Percent_Identity=22.5749559082892, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI262206063, Length=567, Percent_Identity=22.5749559082892, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI94721257, Length=417, Percent_Identity=21.1031175059952, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI94721259, Length=417, Percent_Identity=21.1031175059952, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI94721255, Length=417, Percent_Identity=21.1031175059952, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI94721253, Length=417, Percent_Identity=21.1031175059952, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI39752683, Length=482, Percent_Identity=20.954356846473, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI45827800, Length=482, Percent_Identity=20.954356846473, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI45827802, Length=435, Percent_Identity=21.6091954022989, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI269784651, Length=482, Percent_Identity=21.3692946058091, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87081859, Length=501, Percent_Identity=27.7445109780439, Blast_Score=161, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17551690, Length=592, Percent_Identity=20.777027027027, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI86565215, Length=429, Percent_Identity=20.7459207459207, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193203292, Length=504, Percent_Identity=21.6269841269841, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6325260, Length=462, Percent_Identity=24.025974025974, Blast_Score=71, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6319771, Length=442, Percent_Identity=21.9457013574661, Blast_Score=63, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24647160, Length=422, Percent_Identity=23.696682464455, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21355087, Length=411, Percent_Identity=24.330900243309, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI85815873, Length=432, Percent_Identity=26.1574074074074, Blast_Score=95, Evalue=2e-19,
Organism=Drosophila melanogaster, GI19922482, Length=439, Percent_Identity=23.9179954441913, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24651449, Length=523, Percent_Identity=24.4741873804971, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24649801, Length=546, Percent_Identity=22.1611721611722, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI21358633, Length=511, Percent_Identity=22.7005870841487, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21358229, Length=573, Percent_Identity=24.2582897033159, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24663084, Length=124, Percent_Identity=29.0322580645161, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI21357695, Length=124, Percent_Identity=29.0322580645161, Blast_Score=72, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 55437; Mature: 55437

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLFRHKTSSHKADILSGLTVALALIPEAVAFAFVANVEPMVGLYAAFIMGLVTALIGG
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
RPGMISGATGAMAVVMVSLVVEHGVQYLFAAVVLAGLIQISAGIFKLGKFIRIVPYPVMI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GFVNGLAIVIFLAQLGQFKVKNAAGELVWLPQEPLMLMLGLVALTMAIIYFLPKLTTAVP
HHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLVAILSVTAIVVGFDLETRNVLDFLKTMSGDEHATIAGSLPSFAIPQVPFNLETLYII
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEEE
LPYSFILAAVGLIESLLTLTVIDEMTNTRGRSNKECIGQGVGNITSGFFGAMGGCAMIGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
SMININSGGRGRLSGITAAIGLLTFILFGASFIEIIPLAALVGVMFIVVLGTFEWASFKF
HHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHH
MGKIPKHDAFVIVLVTTVTVFTDLAFAVFVGVVVSALVFAWQHAKHISVKVTSNSLGWKV
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEE
YELNGPLFFGSVASFLELFDASQDPQDVVIDFKHSRVADHSALEAIDTLAERYVALGKKL
EEECCCEEHHHHHHHHHHHCCCCCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHCCEE
HLVHLSADCKALLHKAGDLVEVNLLDDPHYKVADDKLDS
EEEEECHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCC
>Mature Secondary Structure
MFDLFRHKTSSHKADILSGLTVALALIPEAVAFAFVANVEPMVGLYAAFIMGLVTALIGG
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
RPGMISGATGAMAVVMVSLVVEHGVQYLFAAVVLAGLIQISAGIFKLGKFIRIVPYPVMI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GFVNGLAIVIFLAQLGQFKVKNAAGELVWLPQEPLMLMLGLVALTMAIIYFLPKLTTAVP
HHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLVAILSVTAIVVGFDLETRNVLDFLKTMSGDEHATIAGSLPSFAIPQVPFNLETLYII
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEEE
LPYSFILAAVGLIESLLTLTVIDEMTNTRGRSNKECIGQGVGNITSGFFGAMGGCAMIGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
SMININSGGRGRLSGITAAIGLLTFILFGASFIEIIPLAALVGVMFIVVLGTFEWASFKF
HHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHH
MGKIPKHDAFVIVLVTTVTVFTDLAFAVFVGVVVSALVFAWQHAKHISVKVTSNSLGWKV
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEE
YELNGPLFFGSVASFLELFDASQDPQDVVIDFKHSRVADHSALEAIDTLAERYVALGKKL
EEECCCEEHHHHHHHHHHHCCCCCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHCCEE
HLVHLSADCKALLHKAGDLVEVNLLDDPHYKVADDKLDS
EEEEECHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]