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The map label for this gene is 117920973

Identifier: 117920973

GI number: 117920973

Start: 3028872

End: 3029894

Strand: Reverse

Name: 117920973

Synonym: Shewana3_2532

Alternate gene names: NA

Gene position: 3029894-3028872 (Counterclockwise)

Preceding gene: 117920974

Following gene: 117920972

Centisome position: 60.94

GC content: 49.95

Gene sequence:

>1023_bases
GTGGCGGATAATTCAAATGTTGCATTACCTCTGTCGATTTCAGCAGGTATTCATATTGGCGTGATAATTATTCTGGCCAT
TGGCATAGATTTCACCCATAAACCTGAACCTGTGCAACAAGTTAGCGCCCCTGCAGTAAAAGCTGTTATGGTTGATCAGC
AAAAAGTGGCTAATCAAGTTGAAAAGCTTAAGCAGGAAAAGCGCGATGCCGAGCGCCGCGAACGTGAGCGCCAAGCCGAA
CTTGAACGCAAAGCACAGGAAGCAAAGCAAGCCCGTGAGCGTGAACAAGCACAGCTGAAGAAACTGGCGGAAGAACGTAA
GCAGCAGGAAATTGAGACCCAAAAGGCCAATGATGCCGCGAAAGCCGCGCAGGTGAAGCAGCAACAGGAAAAGGAAAAAG
CGCAGAAAGCTGAAGCCGACCGCAAGCAGAAGGAGCAAGAACGTAAACTTGCTGAAGATGCAGCCCAAAAAGCGGCGGAA
AAACGCAAAGTAGAAGAGGCCGCTGCCGCGAAAGCCGAGGCTGACCGTAAGCAGAAGGAAGCCGAAGCCAAGGCGAAAGC
AGAAGCTGATGCTAAAGCCAAAGCGGAGGCAAAAGCCAAGGCCGATGCAGAAGCGAAAGCAAAAGCCGAAGCTAAGGCAA
AAGCGGATGCTGAAGCCAAGGCGCGTGCCCAGCAAGAGCAGGAAATGGCCGATGCGTTAGCCGCCGAGCAGGCTGCGTTA
TCGCAGACCATGAATAAGCAAATGCAAACGGAAGTGGGTAAATACACCGCGATGATTAAATCGACGATTCAACGTAACCT
AGTGGTTGACGAGTCGATGCGCGGTAAAACCTGTACCGTTTCTGTGCGTTTAGCCAATGATGGTTTTGTGATCAGCAGTC
AGACGCAGGGTGGCGATCCTAATGTGTGCCGTGCAGCAAAAGCGGCGATCTTAAAAGCGGGCAAGTTACCAGTGTCTCCG
GATCCTGCTGTTTATAACTTGATGAAAGAAATTAACTTAATCGTTGAACCAACGTTTAATTAA

Upstream 100 bases:

>100_bases
AAATATTCCTTACGATAACGTGATCCAATTGATGGTAACCCTGCAGCAGGCAGGCGTTCCCTCAGTCGGTTTGATGACGG
ATTCACCCAAGGAGAAATAG

Downstream 100 bases:

>100_bases
AGGAGTCCCATGAAAATTTTGGCAAAATGGTTAGCATTGGCGGTTCTGCTTTGCACTATGCCGGCAAAAGCGGCGCTGGA
TATTGTGATCACTGAGGGTG

Product: TolA family protein

Products: NA

Alternate protein names: LA Protein; LA-Like Protein; Protein lA; And Transport-Associated Protein lA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MADNSNVALPLSISAGIHIGVIIILAIGIDFTHKPEPVQQVSAPAVKAVMVDQQKVANQVEKLKQEKRDAERRERERQAE
LERKAQEAKQAREREQAQLKKLAEERKQQEIETQKANDAAKAAQVKQQQEKEKAQKAEADRKQKEQERKLAEDAAQKAAE
KRKVEEAAAAKAEADRKQKEAEAKAKAEADAKAKAEAKAKADAEAKAKAEAKAKADAEAKARAQQEQEMADALAAEQAAL
SQTMNKQMQTEVGKYTAMIKSTIQRNLVVDESMRGKTCTVSVRLANDGFVISSQTQGGDPNVCRAAKAAILKAGKLPVSP
DPAVYNLMKEINLIVEPTFN

Sequences:

>Translated_340_residues
MADNSNVALPLSISAGIHIGVIIILAIGIDFTHKPEPVQQVSAPAVKAVMVDQQKVANQVEKLKQEKRDAERRERERQAE
LERKAQEAKQAREREQAQLKKLAEERKQQEIETQKANDAAKAAQVKQQQEKEKAQKAEADRKQKEQERKLAEDAAQKAAE
KRKVEEAAAAKAEADRKQKEAEAKAKAEADAKAKAEAKAKADAEAKAKAEAKAKADAEAKARAQQEQEMADALAAEQAAL
SQTMNKQMQTEVGKYTAMIKSTIQRNLVVDESMRGKTCTVSVRLANDGFVISSQTQGGDPNVCRAAKAAILKAGKLPVSP
DPAVYNLMKEINLIVEPTFN
>Mature_339_residues
ADNSNVALPLSISAGIHIGVIIILAIGIDFTHKPEPVQQVSAPAVKAVMVDQQKVANQVEKLKQEKRDAERRERERQAEL
ERKAQEAKQAREREQAQLKKLAEERKQQEIETQKANDAAKAAQVKQQQEKEKAQKAEADRKQKEQERKLAEDAAQKAAEK
RKVEEAAAAKAEADRKQKEAEAKAKAEADAKAKAEAKAKADAEAKAKAEAKAKADAEAKARAQQEQEMADALAAEQAALS
QTMNKQMQTEVGKYTAMIKSTIQRNLVVDESMRGKTCTVSVRLANDGFVISSQTQGGDPNVCRAAKAAILKAGKLPVSPD
PAVYNLMKEINLIVEPTFN

Specific function: Unknown

COG id: COG3064

COG function: function code M; Membrane protein involved in colicin uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37178; Mature: 37046

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNSNVALPLSISAGIHIGVIIILAIGIDFTHKPEPVQQVSAPAVKAVMVDQQKVANQV
CCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EKLKQEKRDAERRERERQAELERKAQEAKQAREREQAQLKKLAEERKQQEIETQKANDAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAAQVKQQQEKEKAQKAEADRKQKEQERKLAEDAAQKAAEKRKVEEAAAAKAEADRKQKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEAKAKAEADAKAKAEAKAKADAEAKAKAEAKAKADAEAKARAQQEQEMADALAAEQAAL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SQTMNKQMQTEVGKYTAMIKSTIQRNLVVDESMRGKTCTVSVRLANDGFVISSQTQGGDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEECCCCCCCC
NVCRAAKAAILKAGKLPVSPDPAVYNLMKEINLIVEPTFN
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ADNSNVALPLSISAGIHIGVIIILAIGIDFTHKPEPVQQVSAPAVKAVMVDQQKVANQV
CCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EKLKQEKRDAERRERERQAELERKAQEAKQAREREQAQLKKLAEERKQQEIETQKANDAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAAQVKQQQEKEKAQKAEADRKQKEQERKLAEDAAQKAAEKRKVEEAAAAKAEADRKQKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEAKAKAEADAKAKAEAKAKADAEAKAKAEAKAKADAEAKARAQQEQEMADALAAEQAAL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SQTMNKQMQTEVGKYTAMIKSTIQRNLVVDESMRGKTCTVSVRLANDGFVISSQTQGGDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEECCCCCCCC
NVCRAAKAAILKAGKLPVSPDPAVYNLMKEINLIVEPTFN
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA