Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117920931

Identifier: 117920931

GI number: 117920931

Start: 2976766

End: 2977404

Strand: Reverse

Name: 117920931

Synonym: Shewana3_2488

Alternate gene names: NA

Gene position: 2977404-2976766 (Counterclockwise)

Preceding gene: 117920932

Following gene: 117920929

Centisome position: 59.88

GC content: 38.03

Gene sequence:

>639_bases
ATGAAACATAAAGGTAGAGAGCCTTTCGAGCTAGTGCTTTATATATCCATCATTTTATTGATGCTAGGCCTTTCAGTATC
TGTATTCTTTTACATCAATACATTTTCTGGAGGAATATCGAACTCGTCGGCCGATTGGTCTGCTTTAGGCTCCTTCTTTG
GCGGTGTATTTGCGCCAGCAGTCTCTTTCGTGACCTTAGTGGCAATAATTATCACCATAAGGTTGCAAAAACGTTTGCTA
GAGACTCAGGTTAGCGAATTTTCCAAGTTGCATGCGCTTCAAGTCAAAACTCTTGATGTCCAACAAGAGCAGCTGGATAG
TGTTAAATCTTCTTATGAGTACGAAAAGATAACTTCCTACAAACAAACCATATTGTCTGTTATTTCCCAGCAAATAGATT
TGTACCAAAAGATTATTGACCGTTGTACACATTCCTCAGAATTTATGCTTGAGAAGAAAATGGCTCAGCCGGGAATTGAT
TTAGGAAGTAAGCTGGATGAGGTGCTTGATCAGAAAGAGGAGTATGAGAAAAAGCTAAATGAGCTTGTAAAGCTCTCAAT
TTTAATTGCCGTTTCAAAATATCAGTCTACACAGGAAGTTGATAAAGAATTTATCGAAGGTTATGCAAATCTTCAGTAA

Upstream 100 bases:

>100_bases
ATAACAAGGCCTGCCAGCAATGCTCCCTGCGGTCGCTGGACCTCGTTTTACTCGGCCGCTGCTGGCGGCGTTACACTCTT
TGTCAGGGCTGGGAGAATTA

Downstream 100 bases:

>100_bases
TCTGTAATGTAACAATCGCAGGCACAGGGACAAAATTTCCGCTGCGCTCCTAATTTGCCCGTGCTGCGGGCGTTATCGCC
ATATAAATTTTTATCCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKHKGREPFELVLYISIILLMLGLSVSVFFYINTFSGGISNSSADWSALGSFFGGVFAPAVSFVTLVAIIITIRLQKRLL
ETQVSEFSKLHALQVKTLDVQQEQLDSVKSSYEYEKITSYKQTILSVISQQIDLYQKIIDRCTHSSEFMLEKKMAQPGID
LGSKLDEVLDQKEEYEKKLNELVKLSILIAVSKYQSTQEVDKEFIEGYANLQ

Sequences:

>Translated_212_residues
MKHKGREPFELVLYISIILLMLGLSVSVFFYINTFSGGISNSSADWSALGSFFGGVFAPAVSFVTLVAIIITIRLQKRLL
ETQVSEFSKLHALQVKTLDVQQEQLDSVKSSYEYEKITSYKQTILSVISQQIDLYQKIIDRCTHSSEFMLEKKMAQPGID
LGSKLDEVLDQKEEYEKKLNELVKLSILIAVSKYQSTQEVDKEFIEGYANLQ
>Mature_212_residues
MKHKGREPFELVLYISIILLMLGLSVSVFFYINTFSGGISNSSADWSALGSFFGGVFAPAVSFVTLVAIIITIRLQKRLL
ETQVSEFSKLHALQVKTLDVQQEQLDSVKSSYEYEKITSYKQTILSVISQQIDLYQKIIDRCTHSSEFMLEKKMAQPGID
LGSKLDEVLDQKEEYEKKLNELVKLSILIAVSKYQSTQEVDKEFIEGYANLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24052; Mature: 24052

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKGREPFELVLYISIILLMLGLSVSVFFYINTFSGGISNSSADWSALGSFFGGVFAPA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VSFVTLVAIIITIRLQKRLLETQVSEFSKLHALQVKTLDVQQEQLDSVKSSYEYEKITSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQTILSVISQQIDLYQKIIDRCTHSSEFMLEKKMAQPGIDLGSKLDEVLDQKEEYEKKLN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
ELVKLSILIAVSKYQSTQEVDKEFIEGYANLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKHKGREPFELVLYISIILLMLGLSVSVFFYINTFSGGISNSSADWSALGSFFGGVFAPA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VSFVTLVAIIITIRLQKRLLETQVSEFSKLHALQVKTLDVQQEQLDSVKSSYEYEKITSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQTILSVISQQIDLYQKIIDRCTHSSEFMLEKKMAQPGIDLGSKLDEVLDQKEEYEKKLN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
ELVKLSILIAVSKYQSTQEVDKEFIEGYANLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA