| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920903
Identifier: 117920903
GI number: 117920903
Start: 2949777
End: 2950136
Strand: Direct
Name: 117920903
Synonym: Shewana3_2460
Alternate gene names: NA
Gene position: 2949777-2950136 (Clockwise)
Preceding gene: 117920900
Following gene: 117920904
Centisome position: 59.33
GC content: 47.22
Gene sequence:
>360_bases ATGACTGAAATCAACGCGGCGTTGGCTGGCTTTATCGAAAACGTAAAAGAACATCAAACACTCTGGGGTTTGATGGATGA AACTGGCGAAGGCTGGGTCGTTTGTGACTCGGGCGAGTTCGAAGATACTGATGTTATGCCTTTATGGTCGAGTGAAGCGC AGGCAAAGTCTCACTGCACCGAAGAGTGGAAAGACTACCAAGCGGTGGCCATTAGCCTCGAAGAATTCCTCGAGTACTGG GTATCGGATCTCAACGATGATGGCGTGTTGATTGGTGTTGATTGGCAGAGCGATGAAGACTGCTTAGAGTTAGATCCTAT CGTTCTGGCGAAAGATTTAGTTGATGTTGAAGAGGTTTAA
Upstream 100 bases:
>100_bases GTTAACCAACAGCGAAAAAATCTTAGCAAAGAATCCCTTGGACTATCTATCCGTTGCCGTATAATGGACAAGTTAACAGC ATACTTCAAAGAGACCTATC
Downstream 100 bases:
>100_bases TTCCATCAACCAAAACCGCATGTTTAGGGCATCAAGGGCTGAGGTATTTAGCTCTTGATGTCCGCTTTCCCTTGTATCGA CATTCCCTTCGATAAACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTEINAALAGFIENVKEHQTLWGLMDETGEGWVVCDSGEFEDTDVMPLWSSEAQAKSHCTEEWKDYQAVAISLEEFLEYW VSDLNDDGVLIGVDWQSDEDCLELDPIVLAKDLVDVEEV
Sequences:
>Translated_119_residues MTEINAALAGFIENVKEHQTLWGLMDETGEGWVVCDSGEFEDTDVMPLWSSEAQAKSHCTEEWKDYQAVAISLEEFLEYW VSDLNDDGVLIGVDWQSDEDCLELDPIVLAKDLVDVEEV >Mature_118_residues TEINAALAGFIENVKEHQTLWGLMDETGEGWVVCDSGEFEDTDVMPLWSSEAQAKSHCTEEWKDYQAVAISLEEFLEYWV SDLNDDGVLIGVDWQSDEDCLELDPIVLAKDLVDVEEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13445; Mature: 13314
Theoretical pI: Translated: 3.43; Mature: 3.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEINAALAGFIENVKEHQTLWGLMDETGEGWVVCDSGEFEDTDVMPLWSSEAQAKSHCT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH EEWKDYQAVAISLEEFLEYWVSDLNDDGVLIGVDWQSDEDCLELDPIVLAKDLVDVEEV HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCHHHHHHHHHHCCC >Mature Secondary Structure TEINAALAGFIENVKEHQTLWGLMDETGEGWVVCDSGEFEDTDVMPLWSSEAQAKSHCT CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH EEWKDYQAVAISLEEFLEYWVSDLNDDGVLIGVDWQSDEDCLELDPIVLAKDLVDVEEV HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA