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The map label for this gene is ushA [H]

Identifier: 117920897

GI number: 117920897

Start: 2941773

End: 2943494

Strand: Reverse

Name: ushA [H]

Synonym: Shewana3_2454

Alternate gene names: 117920897

Gene position: 2943494-2941773 (Counterclockwise)

Preceding gene: 117920898

Following gene: 117920894

Centisome position: 59.2

GC content: 46.05

Gene sequence:

>1722_bases
ATGACAAATAAGCTTATTAAAGGACTAATTGCGACTGCAGTGCTGGCTGCGCTAGCAGGTTGTAATAGTGATGATGATAA
TACTAAAGTACCAACAACCTGCGCCGAAGCGGGCAGTGCTTGTAAAACTTTTACCGTATTACACACCAATGATAACCATG
GCCGTTTCTGGGAAAACAGTGATGGCGAATATGGTATGGCAGCGCGTAAAGCGTTAATTGATCAAATTCGTGCTGAAGTC
AGCAAGAATGGCGGCCAAACATTATTATTGTCTGGCGGTGATATTAACACTGGCGTACCAGAATCTGATTTACAGGATGC
GATTCCTGACTTTACCGGTATGAACAAAATTGGTTACGACGCAATGGCAGTCGGTAACCATGAATTCGATAACCCATTAT
CTGTTTTAGATATGCAGCGTCGTTTAGCCGAATTCCCAATGCTGGCGGCGAACATTTACCGTAAAAATGCTGAGGGTGGT
CAAGGTGAACGTTATTTCGAGCCTTACAAAGTGTTCGATATTAACGGTCTTAAAGTAGCTGTGATTGGTTTAACCACCGA
AGACACTGCAAAAATCGGTAACCCAGAATTTATCAGCGATTTAATTTTCACCGATCCTAAAGTGGAAGTGGCGAAAGTTA
TTAAAGAAATTAAAGACGCCAAAGCGGCTGATATTATCTTCGCAACGACTCACATGGGTCACTATGCCGATGGCCAAAAC
GGTAGCAACGCCCCAGGCGACGTCGCTATGGCTCGTGCGTTGAATAAAGGCGACTTACAAGTTGTGATTGGTGGTCACTC
ACAAAATCCAGTGTGTATGGAACCGGGTACTGACAATACGTCTTATGCCGACTTCAAACCTGGTGATAACTGCGCGCCAG
ATCAACAAAACGGCACTTGGATCATGCAAGCCCATGAATGGGGTAAGTATGTTGGCCGTGCGGATTTCCAATACTTCAAC
GGCGAACTGCATTTAGCCAGCTACAAGCTGATCCCAGTTAACATGCGTAAACTGGACGAAGCAGGTAAGAAAACCACAGA
GCTTGCTGGCACTAAGATTGAGCCTGATGCTGAGTTAAAAGAGCTGCTGTCTTACTACCAAGAGAAAGGCCAAGCTAAGT
TAGATGAAGTGATTGCGACTACCGATGCGCTGCTCGATGGTGAACGTGCAAACGTACGTAACAAGCAAACCAACTTAGGC
CGTATGTTAGCCATGGCGCAAAGCGGTAAAGTGTCTGCTGACTTTGGTGTAATGAACTCAGGTGGTGTGCGCGCTTCTAT
CCAAGCGGGCGACATTACTTACCGTGACGTGCTGACGGTTCAACCTTTTGGCAACATGGTCACCCTGAACGAAATGACGG
GTACTGAAGTTGCAGCTTACTTAGGCGCTGTGGGCAGTATCCAAATCGGTTCAGGTGGTTATGCCCAGATCACTGGCGTA
AAAATGACCATCGACTGTGCGGCTAAGACGGCTAATATCAGCGAAATCAATGGCAAAGAGTTCAGTGCGACTGCAAGCTA
TAAGTTCACTGTACCTAGCTTTAACGCTGCAGGTGGTGACGGTTATCCAAAACTGGCTAGCCCAATCCAAACAGGTTATG
TAGATGCGGACTTACTCTATTCATTCCTGAAAGAGAAACAAGCAATCGTAGCTGCTGACTACAACCCAGTGGGCGACATT
GTTTACGAAAACTCAAACAGTGTTGAAGGCTGTCAGCTGTAA

Upstream 100 bases:

>100_bases
CAATTCGTCTTTATTCTTTGCTATTATGCGTGACGCGAATTGGATGGACTTCGCGACAATCTATCTATGATAAAATAATT
AAAATCAAGGGGTTGATGTA

Downstream 100 bases:

>100_bases
TCAATCGCGATAAATTATCGTAAAAAAATGCCACTCATTTGAGTGGCATTTTTATTGATGAACTTACTGAGTTAACAGAT
AAAGTCTAAATTTGTTAATG

Product: bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MTNKLIKGLIATAVLAALAGCNSDDDNTKVPTTCAEAGSACKTFTVLHTNDNHGRFWENSDGEYGMAARKALIDQIRAEV
SKNGGQTLLLSGGDINTGVPESDLQDAIPDFTGMNKIGYDAMAVGNHEFDNPLSVLDMQRRLAEFPMLAANIYRKNAEGG
QGERYFEPYKVFDINGLKVAVIGLTTEDTAKIGNPEFISDLIFTDPKVEVAKVIKEIKDAKAADIIFATTHMGHYADGQN
GSNAPGDVAMARALNKGDLQVVIGGHSQNPVCMEPGTDNTSYADFKPGDNCAPDQQNGTWIMQAHEWGKYVGRADFQYFN
GELHLASYKLIPVNMRKLDEAGKKTTELAGTKIEPDAELKELLSYYQEKGQAKLDEVIATTDALLDGERANVRNKQTNLG
RMLAMAQSGKVSADFGVMNSGGVRASIQAGDITYRDVLTVQPFGNMVTLNEMTGTEVAAYLGAVGSIQIGSGGYAQITGV
KMTIDCAAKTANISEINGKEFSATASYKFTVPSFNAAGGDGYPKLASPIQTGYVDADLLYSFLKEKQAIVAADYNPVGDI
VYENSNSVEGCQL

Sequences:

>Translated_573_residues
MTNKLIKGLIATAVLAALAGCNSDDDNTKVPTTCAEAGSACKTFTVLHTNDNHGRFWENSDGEYGMAARKALIDQIRAEV
SKNGGQTLLLSGGDINTGVPESDLQDAIPDFTGMNKIGYDAMAVGNHEFDNPLSVLDMQRRLAEFPMLAANIYRKNAEGG
QGERYFEPYKVFDINGLKVAVIGLTTEDTAKIGNPEFISDLIFTDPKVEVAKVIKEIKDAKAADIIFATTHMGHYADGQN
GSNAPGDVAMARALNKGDLQVVIGGHSQNPVCMEPGTDNTSYADFKPGDNCAPDQQNGTWIMQAHEWGKYVGRADFQYFN
GELHLASYKLIPVNMRKLDEAGKKTTELAGTKIEPDAELKELLSYYQEKGQAKLDEVIATTDALLDGERANVRNKQTNLG
RMLAMAQSGKVSADFGVMNSGGVRASIQAGDITYRDVLTVQPFGNMVTLNEMTGTEVAAYLGAVGSIQIGSGGYAQITGV
KMTIDCAAKTANISEINGKEFSATASYKFTVPSFNAAGGDGYPKLASPIQTGYVDADLLYSFLKEKQAIVAADYNPVGDI
VYENSNSVEGCQL
>Mature_572_residues
TNKLIKGLIATAVLAALAGCNSDDDNTKVPTTCAEAGSACKTFTVLHTNDNHGRFWENSDGEYGMAARKALIDQIRAEVS
KNGGQTLLLSGGDINTGVPESDLQDAIPDFTGMNKIGYDAMAVGNHEFDNPLSVLDMQRRLAEFPMLAANIYRKNAEGGQ
GERYFEPYKVFDINGLKVAVIGLTTEDTAKIGNPEFISDLIFTDPKVEVAKVIKEIKDAKAADIIFATTHMGHYADGQNG
SNAPGDVAMARALNKGDLQVVIGGHSQNPVCMEPGTDNTSYADFKPGDNCAPDQQNGTWIMQAHEWGKYVGRADFQYFNG
ELHLASYKLIPVNMRKLDEAGKKTTELAGTKIEPDAELKELLSYYQEKGQAKLDEVIATTDALLDGERANVRNKQTNLGR
MLAMAQSGKVSADFGVMNSGGVRASIQAGDITYRDVLTVQPFGNMVTLNEMTGTEVAAYLGAVGSIQIGSGGYAQITGVK
MTIDCAAKTANISEINGKEFSATASYKFTVPSFNAAGGDGYPKLASPIQTGYVDADLLYSFLKEKQAIVAADYNPVGDIV
YENSNSVEGCQL

Specific function: Degradation of extracellular 5'-nucleotides for nutritional needs [H]

COG id: COG0737

COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5'-nucleotidase family [H]

Homologues:

Organism=Homo sapiens, GI4505467, Length=555, Percent_Identity=23.2432432432432, Blast_Score=114, Evalue=3e-25,
Organism=Escherichia coli, GI1786687, Length=567, Percent_Identity=49.0299823633157, Blast_Score=555, Evalue=1e-159,
Organism=Escherichia coli, GI1790658, Length=303, Percent_Identity=24.7524752475248, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI19922444, Length=543, Percent_Identity=26.7034990791897, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI19922446, Length=526, Percent_Identity=26.2357414448669, Blast_Score=132, Evalue=6e-31,
Organism=Drosophila melanogaster, GI24654424, Length=526, Percent_Identity=26.2357414448669, Blast_Score=132, Evalue=6e-31,
Organism=Drosophila melanogaster, GI28573524, Length=556, Percent_Identity=24.2805755395683, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI19921980, Length=503, Percent_Identity=24.4532803180915, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24652512, Length=503, Percent_Identity=24.4532803180915, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI161076508, Length=503, Percent_Identity=24.4532803180915, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24641187, Length=556, Percent_Identity=23.9208633093525, Blast_Score=90, Evalue=5e-18,
Organism=Drosophila melanogaster, GI221329836, Length=491, Percent_Identity=21.1812627291242, Blast_Score=67, Evalue=5e-11,

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008334
- InterPro:   IPR006146
- InterPro:   IPR006179
- InterPro:   IPR004843 [H]

Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]

EC number: =3.1.3.5 [H]

Molecular weight: Translated: 61434; Mature: 61302

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00962 RIBOSOMAL_S2_1 ; PS00107 PROTEIN_KINASE_ATP ; PS00786 5_NUCLEOTIDASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKLIKGLIATAVLAALAGCNSDDDNTKVPTTCAEAGSACKTFTVLHTNDNHGRFWENS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCC
DGEYGMAARKALIDQIRAEVSKNGGQTLLLSGGDINTGVPESDLQDAIPDFTGMNKIGYD
CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCC
AMAVGNHEFDNPLSVLDMQRRLAEFPMLAANIYRKNAEGGQGERYFEPYKVFDINGLKVA
EEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEE
VIGLTTEDTAKIGNPEFISDLIFTDPKVEVAKVIKEIKDAKAADIIFATTHMGHYADGQN
EEEECCCCHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
GSNAPGDVAMARALNKGDLQVVIGGHSQNPVCMEPGTDNTSYADFKPGDNCAPDQQNGTW
CCCCCCHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
IMQAHEWGKYVGRADFQYFNGELHLASYKLIPVNMRKLDEAGKKTTELAGTKIEPDAELK
EEEECHHHHHHCCCCEEEECCEEEEEEEEEEECHHHHHHHHCCHHHHHCCCCCCCCHHHH
ELLSYYQEKGQAKLDEVIATTDALLDGERANVRNKQTNLGRMLAMAQSGKVSADFGVMNS
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCC
GGVRASIQAGDITYRDVLTVQPFGNMVTLNEMTGTEVAAYLGAVGSIQIGSGGYAQITGV
CCEEEEEEECCEEEEEEEEECCCCCEEEEECCCCHHHHHHHCCCCEEEECCCCEEEEEEE
KMTIDCAAKTANISEINGKEFSATASYKFTVPSFNAAGGDGYPKLASPIQTGYVDADLLY
EEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHCCCHHHCCCCHHHHH
SFLKEKQAIVAADYNPVGDIVYENSNSVEGCQL
HHHHCCCEEEEECCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
TNKLIKGLIATAVLAALAGCNSDDDNTKVPTTCAEAGSACKTFTVLHTNDNHGRFWENS
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCC
DGEYGMAARKALIDQIRAEVSKNGGQTLLLSGGDINTGVPESDLQDAIPDFTGMNKIGYD
CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCC
AMAVGNHEFDNPLSVLDMQRRLAEFPMLAANIYRKNAEGGQGERYFEPYKVFDINGLKVA
EEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEE
VIGLTTEDTAKIGNPEFISDLIFTDPKVEVAKVIKEIKDAKAADIIFATTHMGHYADGQN
EEEECCCCHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
GSNAPGDVAMARALNKGDLQVVIGGHSQNPVCMEPGTDNTSYADFKPGDNCAPDQQNGTW
CCCCCCHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
IMQAHEWGKYVGRADFQYFNGELHLASYKLIPVNMRKLDEAGKKTTELAGTKIEPDAELK
EEEECHHHHHHCCCCEEEECCEEEEEEEEEEECHHHHHHHHCCHHHHHCCCCCCCCHHHH
ELLSYYQEKGQAKLDEVIATTDALLDGERANVRNKQTNLGRMLAMAQSGKVSADFGVMNS
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCC
GGVRASIQAGDITYRDVLTVQPFGNMVTLNEMTGTEVAAYLGAVGSIQIGSGGYAQITGV
CCEEEEEEECCEEEEEEEEECCCCCEEEEECCCCHHHHHHHCCCCEEEECCCCEEEEEEE
KMTIDCAAKTANISEINGKEFSATASYKFTVPSFNAAGGDGYPKLASPIQTGYVDADLLY
EEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHCCCHHHCCCCHHHHH
SFLKEKQAIVAADYNPVGDIVYENSNSVEGCQL
HHHHCCCEEEEECCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA