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The map label for this gene is ybaB [C]

Identifier: 117920888

GI number: 117920888

Start: 2932252

End: 2932587

Strand: Reverse

Name: ybaB [C]

Synonym: Shewana3_2445

Alternate gene names: 117920888

Gene position: 2932587-2932252 (Counterclockwise)

Preceding gene: 117920889

Following gene: 117920887

Centisome position: 58.98

GC content: 45.54

Gene sequence:

>336_bases
ATGACTATGTTTGGAAAAGGCGGTATGGGCAATCTGATGAAACAAGCCCAGATGATGCAAGAAAGAATGGCAAAAATGCA
GGAAGAAATTGCCCGCATGGAAATGGTCGGTGAATCAGGTGCTGGCTTGGTTAAAGTGACCATGACTGGCTCACACACAG
TTGGTAAAGTCGAAATCGATCCAAGCTTGATGGAAGACGATAAAGAGATGTTAGAAGATTTGATTGCCGCAGCGTGTAAC
GATGCCGCGCGTCGTATCGAAGAAAACCAAAAAGCCAAAATGGCCGAAGTGACCGGCGGTATGCAATTACCACCAGGCAT
GAAAATGCCATTTTAA

Upstream 100 bases:

>100_bases
ATAAGTTTAGTGATGGGATATCGGCATTGATTGCCAATCCCATTTATTTCAGTAAGATTAGCCAGCTTAAAAGCTTGCGA
CTAACCCTAATAGAAGAGAA

Downstream 100 bases:

>100_bases
TTGAGATAGACGATGAAATTTAGTCCCCTGCTTGACGAGTTAATTCAGTCCCTGCGCTGTTTGCCAGGGGTTGGGCCGAA
ATCGGCTCAACGTATGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTMFGKGGMGNLMKQAQMMQERMAKMQEEIARMEMVGESGAGLVKVTMTGSHTVGKVEIDPSLMEDDKEMLEDLIAAACN
DAARRIEENQKAKMAEVTGGMQLPPGMKMPF

Sequences:

>Translated_111_residues
MTMFGKGGMGNLMKQAQMMQERMAKMQEEIARMEMVGESGAGLVKVTMTGSHTVGKVEIDPSLMEDDKEMLEDLIAAACN
DAARRIEENQKAKMAEVTGGMQLPPGMKMPF
>Mature_110_residues
TMFGKGGMGNLMKQAQMMQERMAKMQEEIARMEMVGESGAGLVKVTMTGSHTVGKVEIDPSLMEDDKEMLEDLIAAACND
AARRIEENQKAKMAEVTGGMQLPPGMKMPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

Organism=Escherichia coli, GI1786677, Length=109, Percent_Identity=77.9816513761468, Blast_Score=177, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 12146; Mature: 12014

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
15.3 %Met     (Translated Protein)
16.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
14.5 %Met     (Mature Protein)
15.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMFGKGGMGNLMKQAQMMQERMAKMQEEIARMEMVGESGAGLVKVTMTGSHTVGKVEID
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEC
PSLMEDDKEMLEDLIAAACNDAARRIEENQKAKMAEVTGGMQLPPGMKMPF
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TMFGKGGMGNLMKQAQMMQERMAKMQEEIARMEMVGESGAGLVKVTMTGSHTVGKVEID
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEC
PSLMEDDKEMLEDLIAAACNDAARRIEENQKAKMAEVTGGMQLPPGMKMPF
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]