| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is ppx [H]
Identifier: 117920861
GI number: 117920861
Start: 2900957
End: 2902513
Strand: Direct
Name: ppx [H]
Synonym: Shewana3_2418
Alternate gene names: 117920861
Gene position: 2900957-2902513 (Clockwise)
Preceding gene: 117920860
Following gene: 117920863
Centisome position: 58.34
GC content: 49.97
Gene sequence:
>1557_bases TTGGTTGCCACACATTCACAACCGCGACACTTTGTCGCTATCGACATGGGCTCAAACAGTTTTCATCTGGTTATCGCCCG TGAGCAAGACGGCAGCTTGCAAATATTGCACAAAGAAAAACAACAAGTTCAGTTAGCGACGGGCCTTAATGCGCAGAACA TCCTCAGCATGGATGCTATCGAGCGCGGCCTCAATTGCCTGCGAGACTTTAATCAGCGTTTTTCCAACCTCGACCAAGCC CAGGTACGTTTAGTCGCCACCCATACCCTAAGGGTGGCCAAAAACCGTGAGCAGTTTATTGAAGCGGCGCTCAGCATTAT GCCCTATCCGGTGGAGGTGATTTCTGGCCACGAGGAAGCGCGCCTCATCTATAACGGCATTGCCCAAAGCCAAGTGCTGG GTAAACGCAATATCGTTATCGATATCGGCGGCGGCTCGACCGAAGTGGTACTCGGGCAAAAAAATACCCCCACCTATTTA TCGAGCCTGCGTTGTGGCTGTGTGAGTTTTAACGAACGCTTTTTTATCGATGGACAAATCACGCCGGCCTCATTTCGCGG AGCGCAAAGCGCCGCCGATAAACAATTTGCCTCGCTATCAAAAGAATATTTCAGTGGCGATTGGGACTTAGTGCTTGGCA GCTCAGGTACAGTCAAAGCCATTTGCGAAGCGATTCAGGAAGATCATGGCGATGAAATCGTCACCCTCGCCCGTCTCAAA CAATTAAAGCTGAAACTGATTAAGTGCGGACACATCAGCCAAGTGCACTTTGCCAATGTCGATGATAAACGCACGCCACT CGTGCCCGCTGGCCTTGCAATTTTAATCAGCTTTTTTAGGCGCTTACCTATTGAACAATTGGAATTTAGTCCGGGCGCCC TGCGCGAAGGCGTACTCTACGAATTAGCGAAAATCGGTCAATATCAAGATATTCGCCATCGCACAGTCGACAGTATTGCC CAGCTTTACCATGTGGATATGCCCCACGCGGCCAAAGTGCGGGACACCGCCATGGCGCTGTTTGAGCAAGTCGCCGATGA ATGGGGATTAAGACCCCATGCGCGTTTGCTGTCCTACGCTGCCACTTTGCATGAGATTGGGCTGCACATCAACTCAAAGG CATTGCATAAACACGGCGCTTATATCATCAGTAACAGTGACTTACCGGGTTTTAGTGAGGCGCTGCAACAGGATTTAGCT AGGCTTATCGCCAACCACCGTAAGAAACCCAATGAATTGTTACTCGCCGAATTAGAGCCAAACCACAAACTCACCCTCAT TCGCCTCGCCTGTCTGCTGCGCTTAGCGGTGTTAGTGCATTTAGGCCGGATTGCCAAGGCCCTAGTGCTTGAGAAAATCC AAGTGGTTCCAGAGGGACTCATGCTAGTGCTGCCCAGCCATAAACGTAAAATCAGTTTGTTTATGAAAGATTTGCAGCGT GAACAGAAACAGATGGCGGCTTTAGGGATGCAGCTGCGTTTAGTCTCTAGCCTTGGGCTGGATCAGGATAAAAATCTCAA GGTAAAAGACGATACATTGAACGCCGTCGCCAGCTAA
Upstream 100 bases:
>100_bases AGCGGAGCACGCGGCGGAACTTGCCCACAATCTCGAATTACAGGCCAAAGCCAGCTAACGCTGGCTTTATCATCGTCTCG ATTGCCTAAGGATAATCCGA
Downstream 100 bases:
>100_bases TCTGTTCCTCCTTTCTTATCCCTTCTAATCCTTCCTCCCTTAGTGCCGTTAACGCACTAAGGGATGAAGAAACCTACATT TGATGCTACTTATCTCCTTT
Product: Ppx/GppA phosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MVATHSQPRHFVAIDMGSNSFHLVIAREQDGSLQILHKEKQQVQLATGLNAQNILSMDAIERGLNCLRDFNQRFSNLDQA QVRLVATHTLRVAKNREQFIEAALSIMPYPVEVISGHEEARLIYNGIAQSQVLGKRNIVIDIGGGSTEVVLGQKNTPTYL SSLRCGCVSFNERFFIDGQITPASFRGAQSAADKQFASLSKEYFSGDWDLVLGSSGTVKAICEAIQEDHGDEIVTLARLK QLKLKLIKCGHISQVHFANVDDKRTPLVPAGLAILISFFRRLPIEQLEFSPGALREGVLYELAKIGQYQDIRHRTVDSIA QLYHVDMPHAAKVRDTAMALFEQVADEWGLRPHARLLSYAATLHEIGLHINSKALHKHGAYIISNSDLPGFSEALQQDLA RLIANHRKKPNELLLAELEPNHKLTLIRLACLLRLAVLVHLGRIAKALVLEKIQVVPEGLMLVLPSHKRKISLFMKDLQR EQKQMAALGMQLRLVSSLGLDQDKNLKVKDDTLNAVAS
Sequences:
>Translated_518_residues MVATHSQPRHFVAIDMGSNSFHLVIAREQDGSLQILHKEKQQVQLATGLNAQNILSMDAIERGLNCLRDFNQRFSNLDQA QVRLVATHTLRVAKNREQFIEAALSIMPYPVEVISGHEEARLIYNGIAQSQVLGKRNIVIDIGGGSTEVVLGQKNTPTYL SSLRCGCVSFNERFFIDGQITPASFRGAQSAADKQFASLSKEYFSGDWDLVLGSSGTVKAICEAIQEDHGDEIVTLARLK QLKLKLIKCGHISQVHFANVDDKRTPLVPAGLAILISFFRRLPIEQLEFSPGALREGVLYELAKIGQYQDIRHRTVDSIA QLYHVDMPHAAKVRDTAMALFEQVADEWGLRPHARLLSYAATLHEIGLHINSKALHKHGAYIISNSDLPGFSEALQQDLA RLIANHRKKPNELLLAELEPNHKLTLIRLACLLRLAVLVHLGRIAKALVLEKIQVVPEGLMLVLPSHKRKISLFMKDLQR EQKQMAALGMQLRLVSSLGLDQDKNLKVKDDTLNAVAS >Mature_518_residues MVATHSQPRHFVAIDMGSNSFHLVIAREQDGSLQILHKEKQQVQLATGLNAQNILSMDAIERGLNCLRDFNQRFSNLDQA QVRLVATHTLRVAKNREQFIEAALSIMPYPVEVISGHEEARLIYNGIAQSQVLGKRNIVIDIGGGSTEVVLGQKNTPTYL SSLRCGCVSFNERFFIDGQITPASFRGAQSAADKQFASLSKEYFSGDWDLVLGSSGTVKAICEAIQEDHGDEIVTLARLK QLKLKLIKCGHISQVHFANVDDKRTPLVPAGLAILISFFRRLPIEQLEFSPGALREGVLYELAKIGQYQDIRHRTVDSIA QLYHVDMPHAAKVRDTAMALFEQVADEWGLRPHARLLSYAATLHEIGLHINSKALHKHGAYIISNSDLPGFSEALQQDLA RLIANHRKKPNELLLAELEPNHKLTLIRLACLLRLAVLVHLGRIAKALVLEKIQVVPEGLMLVLPSHKRKISLFMKDLQR EQKQMAALGMQLRLVSSLGLDQDKNLKVKDDTLNAVAS
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate of circa 500 residues long, while chains of circa 15 residues compete poorly with polyphosphate as substrate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=443, Percent_Identity=42.4379232505643, Blast_Score=345, Evalue=5e-96, Organism=Escherichia coli, GI48994966, Length=459, Percent_Identity=40.0871459694989, Blast_Score=318, Evalue=4e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 57632; Mature: 57632
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVATHSQPRHFVAIDMGSNSFHLVIAREQDGSLQILHKEKQQVQLATGLNAQNILSMDAI CCCCCCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHH ERGLNCLRDFNQRFSNLDQAQVRLVATHTLRVAKNREQFIEAALSIMPYPVEVISGHEEA HHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHH RLIYNGIAQSQVLGKRNIVIDIGGGSTEVVLGQKNTPTYLSSLRCGCVSFNERFFIDGQI HHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHCCEEECCCEEEECCEE TPASFRGAQSAADKQFASLSKEYFSGDWDLVLGSSGTVKAICEAIQEDHGDEIVTLARLK CCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHH QLKLKLIKCGHISQVHFANVDDKRTPLVPAGLAILISFFRRLPIEQLEFSPGALREGVLY HHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHH ELAKIGQYQDIRHRTVDSIAQLYHVDMPHAAKVRDTAMALFEQVADEWGLRPHARLLSYA HHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ATLHEIGLHINSKALHKHGAYIISNSDLPGFSEALQQDLARLIANHRKKPNELLLAELEP HHHHHHCCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC NHKLTLIRLACLLRLAVLVHLGRIAKALVLEKIQVVPEGLMLVLPSHKRKISLFMKDLQR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH EQKQMAALGMQLRLVSSLGLDQDKNLKVKDDTLNAVAS HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHCC >Mature Secondary Structure MVATHSQPRHFVAIDMGSNSFHLVIAREQDGSLQILHKEKQQVQLATGLNAQNILSMDAI CCCCCCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHH ERGLNCLRDFNQRFSNLDQAQVRLVATHTLRVAKNREQFIEAALSIMPYPVEVISGHEEA HHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHH RLIYNGIAQSQVLGKRNIVIDIGGGSTEVVLGQKNTPTYLSSLRCGCVSFNERFFIDGQI HHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHCCEEECCCEEEECCEE TPASFRGAQSAADKQFASLSKEYFSGDWDLVLGSSGTVKAICEAIQEDHGDEIVTLARLK CCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHH QLKLKLIKCGHISQVHFANVDDKRTPLVPAGLAILISFFRRLPIEQLEFSPGALREGVLY HHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHH ELAKIGQYQDIRHRTVDSIAQLYHVDMPHAAKVRDTAMALFEQVADEWGLRPHARLLSYA HHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ATLHEIGLHINSKALHKHGAYIISNSDLPGFSEALQQDLARLIANHRKKPNELLLAELEP HHHHHHCCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC NHKLTLIRLACLLRLAVLVHLGRIAKALVLEKIQVVPEGLMLVLPSHKRKISLFMKDLQR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH EQKQMAALGMQLRLVSSLGLDQDKNLKVKDDTLNAVAS HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]