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The map label for this gene is yegD [H]

Identifier: 117920859

GI number: 117920859

Start: 2896973

End: 2898427

Strand: Reverse

Name: yegD [H]

Synonym: Shewana3_2416

Alternate gene names: 117920859

Gene position: 2898427-2896973 (Counterclockwise)

Preceding gene: 117920862

Following gene: 117920858

Centisome position: 58.29

GC content: 53.95

Gene sequence:

>1455_bases
ATGTTTGTCGGATTTGATTATGGCAGTGCCAACTGTGCCGTTGGGATCATGCAGGGAGATGACGTTTCACTGTTACCCTT
ATCGAGCGATTCAGCCTATTTACCTTCCACTGTGTATGCAATGGATAGAGAGCTTATTGCCGAGGCCGTTTACCGTGGCT
TGCCGCAGGCGTTAAAAGCGGATTATGCCAAGAAGCGCGCCGCGCAATTGAGCCGCGCCCGTATGGTGCGCCATGAATTA
GATCTCGATGCCGAAACCCAAGCGGTGTTTGTGGGTGAGCAGGCCGTGGCCGCTTATCTTGAAATGCCGGAAGAAGGTTT
TTATGTCCGTTCGCCAAAATCCTTTTTAGGGGCAACGGGCCTGAGACCCGAGCAAGTCGCCCTGTTTGAAGACATAGTCA
CCTTAATGATGCAGCACATTAAAGTGCGCGCCGAAGCCGTACTCGCTGAAAAGGGCGTCGTATCTGAGGGACAGACCAGC
ATTACCCATGCGGTGATTGGCCGCCCAGTGAACTTTCAAGGCATTGGTGGTGAAGAGAGTAACCGCCAAGCTGAGGCCAT
TTTGACCTTAGCCGCGAAACGGGCGGGGTTTGTTGATGTGGCATTCCTATTCGAACCACTGGCCGCGGGGATGGACTATG
AGGCGAGCCTCAGTGCCGACCAAACCGTGCTGGTGGTCGACGTCGGTGGCGGTACGACCGACTGCTCCGTGGTCAAAATG
GGGCCAAAGCATCAGGCGAGTTTCGATCGCAGTGCCGATTGCCTTGGCCACAGCGGCCAGCGGATTGGCGGAAACGATTT
GGATATTGCGCTGGCGATGAATGCCTTTATGCCGCACTTTGGCTTAGGCTCGCTGATGAGTAATGGTAAGCCTATGCCGA
GCAATCCTTTTTGGAATGCGGTCGCCGTCAACGATATTAGCGCCCAGCGTGAGTTTGCCACCCTAAGCACTCGCAAGTTG
ATTGATGAACTCATTAAAGAGGCCGAGCAGCCGCAGCTGTTAAAAAGATTGCTTAAAGTGCAGCAACAACAGTTAAGCTA
CCAAATTGTACGACTAGCAGAACGCGCTAAAATTGCCCTGTCGGAGGCACAAACGACGCAGAGTGCGCTGGACTTTATTG
AAGCATCACTTCGGGCCGAAGTGAGCCGCACGGGCTTTGAAACGGCGATTGAGCCTTCGCTCACCAAGATTGAGGCGCTG
ATGCACCAAGCGTTGACTCAGGCGGCAAAGAGTCTTGCGGGCAATGGCTTAGCGCCAGAGGAGCTGTCTGTGGATGCCGA
TAGTCTTGAGTGCAAACCCGATGTGATTTATGTGACGGGAGGCACCGCGCGCAGCCCAGCGATTTACGCTAAAATCACTA
GCCTTTATCCCGATACCCCTGTGGTCGTCGGTGACCACTTTGGTTCGGTGACGGCGGGGTTAACGCGCTGGGCACAAAAG
TGTTTTGCTCAATAA

Upstream 100 bases:

>100_bases
GGTAAAGCAGGGAAACTGTGCTGGGCTTCCTTTGGGATTGGGGCAAACTGTGTTACCTTGCTCGGCTTTTTGATTGTGGT
TTGACTGTAGGGGTAAGCGG

Downstream 100 bases:

>100_bases
GGAAGGATGATGAATAAGGATAAACAGATGAAAAGAGTCAATAAGGCTTTGATGTCTTTGCTGGCCGTGACGCTGGCGGG
GATGGTACTCACGGGCTGTG

Product: putative chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MFVGFDYGSANCAVGIMQGDDVSLLPLSSDSAYLPSTVYAMDRELIAEAVYRGLPQALKADYAKKRAAQLSRARMVRHEL
DLDAETQAVFVGEQAVAAYLEMPEEGFYVRSPKSFLGATGLRPEQVALFEDIVTLMMQHIKVRAEAVLAEKGVVSEGQTS
ITHAVIGRPVNFQGIGGEESNRQAEAILTLAAKRAGFVDVAFLFEPLAAGMDYEASLSADQTVLVVDVGGGTTDCSVVKM
GPKHQASFDRSADCLGHSGQRIGGNDLDIALAMNAFMPHFGLGSLMSNGKPMPSNPFWNAVAVNDISAQREFATLSTRKL
IDELIKEAEQPQLLKRLLKVQQQQLSYQIVRLAERAKIALSEAQTTQSALDFIEASLRAEVSRTGFETAIEPSLTKIEAL
MHQALTQAAKSLAGNGLAPEELSVDADSLECKPDVIYVTGGTARSPAIYAKITSLYPDTPVVVGDHFGSVTAGLTRWAQK
CFAQ

Sequences:

>Translated_484_residues
MFVGFDYGSANCAVGIMQGDDVSLLPLSSDSAYLPSTVYAMDRELIAEAVYRGLPQALKADYAKKRAAQLSRARMVRHEL
DLDAETQAVFVGEQAVAAYLEMPEEGFYVRSPKSFLGATGLRPEQVALFEDIVTLMMQHIKVRAEAVLAEKGVVSEGQTS
ITHAVIGRPVNFQGIGGEESNRQAEAILTLAAKRAGFVDVAFLFEPLAAGMDYEASLSADQTVLVVDVGGGTTDCSVVKM
GPKHQASFDRSADCLGHSGQRIGGNDLDIALAMNAFMPHFGLGSLMSNGKPMPSNPFWNAVAVNDISAQREFATLSTRKL
IDELIKEAEQPQLLKRLLKVQQQQLSYQIVRLAERAKIALSEAQTTQSALDFIEASLRAEVSRTGFETAIEPSLTKIEAL
MHQALTQAAKSLAGNGLAPEELSVDADSLECKPDVIYVTGGTARSPAIYAKITSLYPDTPVVVGDHFGSVTAGLTRWAQK
CFAQ
>Mature_484_residues
MFVGFDYGSANCAVGIMQGDDVSLLPLSSDSAYLPSTVYAMDRELIAEAVYRGLPQALKADYAKKRAAQLSRARMVRHEL
DLDAETQAVFVGEQAVAAYLEMPEEGFYVRSPKSFLGATGLRPEQVALFEDIVTLMMQHIKVRAEAVLAEKGVVSEGQTS
ITHAVIGRPVNFQGIGGEESNRQAEAILTLAAKRAGFVDVAFLFEPLAAGMDYEASLSADQTVLVVDVGGGTTDCSVVKM
GPKHQASFDRSADCLGHSGQRIGGNDLDIALAMNAFMPHFGLGSLMSNGKPMPSNPFWNAVAVNDISAQREFATLSTRKL
IDELIKEAEQPQLLKRLLKVQQQQLSYQIVRLAERAKIALSEAQTTQSALDFIEASLRAEVSRTGFETAIEPSLTKIEAL
MHQALTQAAKSLAGNGLAPEELSVDADSLECKPDVIYVTGGTARSPAIYAKITSLYPDTPVVVGDHFGSVTAGLTRWAQK
CFAQ

Specific function: Unknown

COG id: COG0443

COG function: function code O; Molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heat shock protein 70 family [H]

Homologues:

Organism=Escherichia coli, GI87082035, Length=482, Percent_Identity=46.8879668049792, Blast_Score=435, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018181
- InterPro:   IPR001023
- InterPro:   IPR013126 [H]

Pfam domain/function: PF00012 HSP70 [H]

EC number: NA

Molecular weight: Translated: 52070; Mature: 52070

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00329 HSP70_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVGFDYGSANCAVGIMQGDDVSLLPLSSDSAYLPSTVYAMDRELIAEAVYRGLPQALKA
CEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
DYAKKRAAQLSRARMVRHELDLDAETQAVFVGEQAVAAYLEMPEEGFYVRSPKSFLGATG
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHCCCCCCEEECCHHHHCCCC
LRPEQVALFEDIVTLMMQHIKVRAEAVLAEKGVVSEGQTSITHAVIGRPVNFQGIGGEES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
NRQAEAILTLAAKRAGFVDVAFLFEPLAAGMDYEASLSADQTVLVVDVGGGTTDCSVVKM
CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEC
GPKHQASFDRSADCLGHSGQRIGGNDLDIALAMNAFMPHFGLGSLMSNGKPMPSNPFWNA
CCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHCCCCCCCCCCCCE
VAVNDISAQREFATLSTRKLIDELIKEAEQPQLLKRLLKVQQQQLSYQIVRLAERAKIAL
EEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEAQTTQSALDFIEASLRAEVSRTGFETAIEPSLTKIEALMHQALTQAAKSLAGNGLAPE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ELSVDADSLECKPDVIYVTGGTARSPAIYAKITSLYPDTPVVVGDHFGSVTAGLTRWAQK
HCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEHHCCCCCCEEECCCCCHHHHHHHHHHHH
CFAQ
HHCC
>Mature Secondary Structure
MFVGFDYGSANCAVGIMQGDDVSLLPLSSDSAYLPSTVYAMDRELIAEAVYRGLPQALKA
CEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
DYAKKRAAQLSRARMVRHELDLDAETQAVFVGEQAVAAYLEMPEEGFYVRSPKSFLGATG
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHCCCCCCEEECCHHHHCCCC
LRPEQVALFEDIVTLMMQHIKVRAEAVLAEKGVVSEGQTSITHAVIGRPVNFQGIGGEES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
NRQAEAILTLAAKRAGFVDVAFLFEPLAAGMDYEASLSADQTVLVVDVGGGTTDCSVVKM
CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEC
GPKHQASFDRSADCLGHSGQRIGGNDLDIALAMNAFMPHFGLGSLMSNGKPMPSNPFWNA
CCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHCCCCCCCCCCCCE
VAVNDISAQREFATLSTRKLIDELIKEAEQPQLLKRLLKVQQQQLSYQIVRLAERAKIAL
EEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEAQTTQSALDFIEASLRAEVSRTGFETAIEPSLTKIEALMHQALTQAAKSLAGNGLAPE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ELSVDADSLECKPDVIYVTGGTARSPAIYAKITSLYPDTPVVVGDHFGSVTAGLTRWAQK
HCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEHHCCCCCCEEECCCCCHHHHHHHHHHHH
CFAQ
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7940673; 7984428 [H]