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The map label for this gene is 117920791

Identifier: 117920791

GI number: 117920791

Start: 2826617

End: 2827315

Strand: Reverse

Name: 117920791

Synonym: Shewana3_2348

Alternate gene names: NA

Gene position: 2827315-2826617 (Counterclockwise)

Preceding gene: 117920792

Following gene: 117920790

Centisome position: 56.86

GC content: 45.49

Gene sequence:

>699_bases
ATGGATGAGTGGGCAGTCATGTTGTTATCGGCCTTTTGGTTTGGCATTTTAACCTCTATAAGTCCCTGTCCTTTGGCCAC
CAATGTGGCGGCCATTTCCTATATCAGTAAAGGAATACAATCGCCTTATCGGGTAGTGGGTACTGGGCTTGCCTACACGA
TAGGGCGCATGCTGAGTTATTTGGTGATTGGTGTGATATTGGTAGGCAGTTTGCTCTCGACAATGACATTATCCGTCGCG
CTTCAGAAATATATGAACCTACTATTAGGTCCGATTTTGATATTGGTGGGGATGTTTTTGCTGGAGTTATTGACGTTGCG
TCTGCCGGGTGATGGTGCCTTAATCGAAAAATTAAAGTCTAAAATCAATCCTCAGGGATATGTAGGAGCTTTACTGCTAG
GCGTGTTATTTGCGCTGTCATTTTGTCCGACTTCCGCCGCGCTCTTCTTTGGTTCGCTGCTACCGCTTGCACTAGAGTCA
CAATCGAGTATTGCACTGCCAGCGATTTATGGTTTAGCGACTGGGCTGCCGGTTTTAGTTTTCGCTATTTTGCTTGGCGT
TAGTGCCCATCGTGTTGCTAAAGCCTACAACCATATTTTGACGTTTGAGCATTGGGCCAGAAAAATCACTGGCGTGGTGT
TTATCATCATTGGCGCCTATTACGCTTGGGTGAATATTTTCGTTCCATCTTTGTTTTAG

Upstream 100 bases:

>100_bases
CGAGCATTCAGCCAATATTTGACTGAAGAGATTAACGCAATGGTTAATCAAACTCAGGCAAATCAAACCCTCGCGGCGCC
ATCTCCCAAGGAGCTCCCCC

Downstream 100 bases:

>100_bases
CCTAATTTTATTCCTAACAATGCTTTTCTTGTGAGGTCCTTTCTGTGAAAAAACCGTTGGTGTTAATAGTTGGAAGTACC
TTTATTCTATTAATTGGGAT

Product: cytochrome c biogenesis protein, transmembrane region

Products: NA

Alternate protein names: Cytochrome C Biogenesis Protein Transmembrane Region

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDEWAVMLLSAFWFGILTSISPCPLATNVAAISYISKGIQSPYRVVGTGLAYTIGRMLSYLVIGVILVGSLLSTMTLSVA
LQKYMNLLLGPILILVGMFLLELLTLRLPGDGALIEKLKSKINPQGYVGALLLGVLFALSFCPTSAALFFGSLLPLALES
QSSIALPAIYGLATGLPVLVFAILLGVSAHRVAKAYNHILTFEHWARKITGVVFIIIGAYYAWVNIFVPSLF

Sequences:

>Translated_232_residues
MDEWAVMLLSAFWFGILTSISPCPLATNVAAISYISKGIQSPYRVVGTGLAYTIGRMLSYLVIGVILVGSLLSTMTLSVA
LQKYMNLLLGPILILVGMFLLELLTLRLPGDGALIEKLKSKINPQGYVGALLLGVLFALSFCPTSAALFFGSLLPLALES
QSSIALPAIYGLATGLPVLVFAILLGVSAHRVAKAYNHILTFEHWARKITGVVFIIIGAYYAWVNIFVPSLF
>Mature_232_residues
MDEWAVMLLSAFWFGILTSISPCPLATNVAAISYISKGIQSPYRVVGTGLAYTIGRMLSYLVIGVILVGSLLSTMTLSVA
LQKYMNLLLGPILILVGMFLLELLTLRLPGDGALIEKLKSKINPQGYVGALLLGVLFALSFCPTSAALFFGSLLPLALES
QSSIALPAIYGLATGLPVLVFAILLGVSAHRVAKAYNHILTFEHWARKITGVVFIIIGAYYAWVNIFVPSLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24939; Mature: 24939

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEWAVMLLSAFWFGILTSISPCPLATNVAAISYISKGIQSPYRVVGTGLAYTIGRMLSY
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LVIGVILVGSLLSTMTLSVALQKYMNLLLGPILILVGMFLLELLTLRLPGDGALIEKLKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KINPQGYVGALLLGVLFALSFCPTSAALFFGSLLPLALESQSSIALPAIYGLATGLPVLV
HCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH
FAILLGVSAHRVAKAYNHILTFEHWARKITGVVFIIIGAYYAWVNIFVPSLF
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDEWAVMLLSAFWFGILTSISPCPLATNVAAISYISKGIQSPYRVVGTGLAYTIGRMLSY
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LVIGVILVGSLLSTMTLSVALQKYMNLLLGPILILVGMFLLELLTLRLPGDGALIEKLKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KINPQGYVGALLLGVLFALSFCPTSAALFFGSLLPLALESQSSIALPAIYGLATGLPVLV
HCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH
FAILLGVSAHRVAKAYNHILTFEHWARKITGVVFIIIGAYYAWVNIFVPSLF
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA